RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	BDF2	Q07442	638 aa		4.21	□□□□□ -1.74
SKP2	YNL311C	SIS1	P25294	352 aa	Known RBP	4.2	□□□□□ -1.74
SKP2	YNL311C	PAH1	P32567	862 aa		4.2	□□□□□ -1.74
SKP2	YNL311C	INP54	Q08227	384 aa	Known RBP	4.2	□□□□□ -1.74
SKP2	YNL311C	LYS2	P07702	1392 aa		4.2	□□□□□ -1.74
SKP2	YNL311C	OXP1	P28273	1286 aa		4.2	□□□□□ -1.74
SKP2	YNL311C	FAS2	P19097	1887 aa	Known RBP	4.2	□□□□□ -1.74
SKP2	YNL311C	DPL1	Q05567	589 aa		4.19	□□□□□ -1.74
SKP2	YNL311C	UTP10	P42945	1769 aa	Known RBP	4.19	□□□□□ -1.74
SKP2	YNL311C	DPS1	P04802	557 aa	Known RBP	4.19	□□□□□ -1.74
SKP2	YNL311C	UBP9	P39967	754 aa		4.18	□□□□□ -1.74
SKP2	YNL311C	YNR014W	P53719	212 aa		4.18	□□□□□ -1.74
SKP2	YNL311C	CRF1	Q04930	467 aa		4.18	□□□□□ -1.74
SKP2	YNL311C	YLR225C	Q05948	407 aa	Known RBP	4.18	□□□□□ -1.74
SKP2	YNL311C	SPE2	P21182	396 aa		4.18	□□□□□ -1.74
SKP2	YNL311C	YFL040W	P43562	540 aa		4.18	□□□□□ -1.74
SKP2	YNL311C	TRM44	Q02648	567 aa	Known RBP	4.17	□□□□□ -1.74
SKP2	YNL311C	SCT1	P32784	759 aa		4.16	□□□□□ -1.74
SKP2	YNL311C	EPS1	P40557	701 aa		4.16	□□□□□ -1.74
SKP2	YNL311C	TEA1	P47988	759 aa		4.16	□□□□□ -1.74
SKP2	YNL311C	SGD1	Q06132	899 aa		4.16	□□□□□ -1.74
SKP2	YNL311C	FIR1	P40020	876 aa		4.16	□□□□□ -1.74
SKP2	YNL311C	RTF1	P53064	558 aa		4.16	□□□□□ -1.74
SKP2	YNL311C	YFR016C	P43597	1233 aa	Known RBP	4.15	□□□□□ -1.74
SKP2	YNL311C	SEC3	P33332	1336 aa	Known RBP	4.15	□□□□□ -1.74
SKP2	YNL311C	YPR117W	Q06116	2489 aa		4.15	□□□□□ -1.74
SKP2	YNL311C	GSC2	P40989	1895 aa		4.15	□□□□□ -1.75
SKP2	YNL311C	HPR1	P17629	752 aa	Known RBP	4.15	□□□□□ -1.75
SKP2	YNL311C	SPR3	P41901	512 aa		4.15	□□□□□ -1.75
SKP2	YNL311C	ULP1	Q02724	621 aa		4.15	□□□□□ -1.75
SKP2	YNL311C	ECM30	Q06673	1274 aa		4.15	□□□□□ -1.75
SKP2	YNL311C	PHM7	Q12252	991 aa		4.15	□□□□□ -1.75
SKP2	YNL311C	TOM1	Q03280	3268 aa		4.15	□□□□□ -1.75
SKP2	YNL311C	LDH1	P38139	375 aa		4.14	□□□□□ -1.75
SKP2	YNL311C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SKP2	YNL311C	RMT2	Q03305	412 aa		4.14	□□□□□ -1.75
SKP2	YNL311C	PDI1	P17967	522 aa	Known RBP	4.13	□□□□□ -1.75
SKP2	YNL311C	BBC1	P47068	1157 aa		4.13	□□□□□ -1.75
SKP2	YNL311C	CTF4	Q01454	927 aa		4.13	□□□□□ -1.75
SKP2	YNL311C	UBP16	Q02863	499 aa		4.13	□□□□□ -1.75
SKP2	YNL311C	FMP30	Q02883	468 aa		4.13	□□□□□ -1.75
SKP2	YNL311C	PMD1	P32634	1753 aa		4.13	□□□□□ -1.75
SKP2	YNL311C	NUP145	P49687	1317 aa		4.13	□□□□□ -1.75
SKP2	YNL311C	ASH1	P34233	588 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	PSF2	P40359	213 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	VPS62	P53285	467 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	SAS4	Q04003	481 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	GAS4	Q08271	471 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	HKR1	P41809	1802 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	MSC7	P38694	644 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	PNT1	P38969	423 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	RSM7	P47150	247 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	VPS4	P52917	437 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	JIP4	Q03361	876 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	YML133C	Q03099	1374 aa		4.12	□□□□□ -1.75
SKP2	YNL311C	SSK22	P25390	1331 aa	Predicted RBP	4.11	□□□□□ -1.75
SKP2	YNL311C	SER1	P33330	395 aa	Known RBP	4.11	□□□□□ -1.75
SKP2	YNL311C	RPN1	P38764	993 aa	Known RBP	4.11	□□□□□ -1.75
SKP2	YNL311C	SYF1	Q04048	859 aa	Predicted RBP	4.11	□□□□□ -1.75
SKP2	YNL311C	RRG1	Q12167	365 aa	Predicted RBP	4.11	□□□□□ -1.75
SKP2	YNL311C	GRX4	P32642	244 aa		4.11	□□□□□ -1.75
SKP2	YNL311C	NOP53	Q12080	455 aa	Known RBP	4.11	□□□□□ -1.75
SKP2	YNL311C	HSP104	P31539	908 aa	Known RBP	4.1	□□□□□ -1.75
SKP2	YNL311C	UBX2	Q04228	584 aa		4.1	□□□□□ -1.75
SKP2	YNL311C	AHC1	Q12433	566 aa		4.1	□□□□□ -1.75
SKP2	YNL311C	GAL2	P13181	574 aa		4.1	□□□□□ -1.75
SKP2	YNL311C	YHR131C	P38835	850 aa		4.1	□□□□□ -1.75
SKP2	YNL311C	CAF20	P12962	161 aa	Known RBP	4.09	□□□□□ -1.75
SKP2	YNL311C	STV1	P37296	890 aa		4.09	□□□□□ -1.75
SKP2	YNL311C	YPL034W	Q03083	165 aa		4.09	□□□□□ -1.76
SKP2	YNL311C	NUM1	Q00402	2748 aa		4.08	□□□□□ -1.76
SKP2	YNL311C	AI2	P03876	854 aa		4.08	□□□□□ -1.76
SKP2	YNL311C	CBP1	P07252	654 aa		4.08	□□□□□ -1.76
SKP2	YNL311C	FRD1	P32614	470 aa	Known RBP	4.08	□□□□□ -1.76
SKP2	YNL311C	AFG2	P32794	780 aa		4.08	□□□□□ -1.76
SKP2	YNL311C	KIP3	P53086	805 aa	Known RBP	4.08	□□□□□ -1.76
SKP2	YNL311C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SKP2	YNL311C	FLO1	P32768	1537 aa		4.08	□□□□□ -1.76
SKP2	YNL311C	SSP2	Q08646	371 aa		4.07	□□□□□ -1.76
SKP2	YNL311C	AIM21	P40563	679 aa		4.07	□□□□□ -1.76
SKP2	YNL311C	SEN54	Q02825	467 aa	Predicted RBP	4.07	□□□□□ -1.76
SKP2	YNL311C	TAP42	Q04372	366 aa		4.07	□□□□□ -1.76
SKP2	YNL311C	YDR034W-B	Q6Q5X2	51 aa		4.07	□□□□□ -1.76
SKP2	YNL311C	ZDS2	P54786	942 aa		4.06	□□□□□ -1.76
SKP2	YNL311C	YOR238W	Q08634	303 aa		4.06	□□□□□ -1.76
SKP2	YNL311C	HAT1	Q12341	374 aa		4.06	□□□□□ -1.76
SKP2	YNL311C	ERG7	P38604	731 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	YGL082W	P53155	381 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	ICL2	Q12031	575 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	TY3A-G	Q12173	290 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	TY3A-I	Q99219	290 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	ADR1	P07248	1323 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	TUS1	Q06412	1307 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	AUS1	Q08409	1394 aa		4.05	□□□□□ -1.76
SKP2	YNL311C	CUP1-1	P0CX80	61 aa		4.04	□□□□□ -1.76
SKP2	YNL311C	CUP1-2	P0CX81	61 aa		4.04	□□□□□ -1.76
SKP2	YNL311C	NIT1	P40447	199 aa		4.04	□□□□□ -1.76
SKP2	YNL311C	ATG1	P53104	897 aa		4.04	□□□□□ -1.76
SKP2	YNL311C	GIN4	Q12263	1142 aa		4.04	□□□□□ -1.76
SKP2	YNL311C	TAO3	P40468	2376 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms