RNA–Protein interactions for RNA: YMR140W

SIP5, Transcript of Protein of unknown function, yeastyeast

Gene SIP5, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIP5YMR140W SPT7P35177 1332 aa6.55□□□□□ -1.36
SIP5YMR140W RPP2BP02400 110 aaKnown RBP6.55□□□□□ -1.36
SIP5YMR140W PRS1P32895 427 aaKnown RBP6.55□□□□□ -1.36
SIP5YMR140W DLD3P39976 496 aaKnown RBP6.55□□□□□ -1.36
SIP5YMR140W ECM5Q03214 1411 aa6.55□□□□□ -1.36
SIP5YMR140W XRN1P22147 1528 aaKnown RBP6.55□□□□□ -1.36
SIP5YMR140W RNA1P11745 407 aaKnown RBP6.54□□□□□ -1.36
SIP5YMR140W CEM1P39525 442 aa6.53□□□□□ -1.36
SIP5YMR140W IKI3Q06706 1349 aaKnown RBP6.53□□□□□ -1.36
SIP5YMR140W KIN1P13185 1064 aa6.53□□□□□ -1.36
SIP5YMR140W NUG1P40010 520 aaKnown RBP6.53□□□□□ -1.36
SIP5YMR140W YGR130CP53278 816 aa6.53□□□□□ -1.36
SIP5YMR140W CWC22P53333 577 aaKnown RBP6.53□□□□□ -1.36
SIP5YMR140W AI1P03875 834 aa6.52□□□□□ -1.37
SIP5YMR140W YFL066CP43538 392 aa6.52□□□□□ -1.37
SIP5YMR140W TY1B-DR4Q07793 1604 aa6.51□□□□□ -1.37
SIP5YMR140W KRI1P42846 591 aaKnown RBP6.51□□□□□ -1.37
SIP5YMR140W UBP15P50101 1230 aa6.51□□□□□ -1.37
SIP5YMR140W THI72Q08579 599 aa6.51□□□□□ -1.37
SIP5YMR140W WTM2Q12206 467 aa6.5□□□□□ -1.37
SIP5YMR140W FUN12P39730 1002 aaKnown RBP6.49□□□□□ -1.37
SIP5YMR140W MSN5P52918 1224 aa6.49□□□□□ -1.37
SIP5YMR140W DIT1P21623 536 aa6.48□□□□□ -1.37
SIP5YMR140W SLA1P32790 1244 aa6.48□□□□□ -1.37
SIP5YMR140W SSN3P39073 555 aa6.48□□□□□ -1.37
SIP5YMR140W MRX12P47084 519 aa6.48□□□□□ -1.37
SIP5YMR140W SYT1Q06836 1226 aa6.48□□□□□ -1.37
SIP5YMR140W SPT2P06843 333 aaPredicted RBP6.47□□□□□ -1.37
SIP5YMR140W APL6P46682 809 aa6.47□□□□□ -1.37
SIP5YMR140W YMR265CQ03508 461 aaKnown RBP6.47□□□□□ -1.37
SIP5YMR140W ISR1Q06098 443 aaKnown RBP6.47□□□□□ -1.37
SIP5YMR140W FPR4Q06205 392 aaPredicted RBP6.47□□□□□ -1.37
SIP5YMR140W TY1A-DR3Q12441 440 aa6.47□□□□□ -1.37
SIP5YMR140W CSE4P36012 229 aa6.47□□□□□ -1.37
SIP5YMR140W TRM732Q03496 1420 aa6.47□□□□□ -1.37
SIP5YMR140W MCM16Q12262 181 aa6.47□□□□□ -1.37
SIP5YMR140W HSP82P02829 709 aaKnown RBP6.46□□□□□ -1.38
SIP5YMR140W UTR2P32623 467 aa6.46□□□□□ -1.38
SIP5YMR140W SNF7P39929 240 aaKnown RBP6.46□□□□□ -1.38
SIP5YMR140W EMP47P43555 445 aa6.46□□□□□ -1.38
SIP5YMR140W SPT5P27692 1063 aaKnown RBP6.45□□□□□ -1.38
SIP5YMR140W PAF1P38351 445 aa6.45□□□□□ -1.38
SIP5YMR140W CCT8P47079 568 aaKnown RBP6.45□□□□□ -1.38
SIP5YMR140W ADE12P80210 433 aaKnown RBP6.45□□□□□ -1.38
SIP5YMR140W DAT1P13483 248 aaKnown RBP6.44□□□□□ -1.38
SIP5YMR140W ISF1P32488 338 aa6.44□□□□□ -1.38
SIP5YMR140W YDR461C-AQ2V2P7 80 aa6.44□□□□□ -1.38
SIP5YMR140W RPC31P17890 251 aa6.43□□□□□ -1.38
SIP5YMR140W NAP1P25293 417 aaKnown RBP6.43□□□□□ -1.38
SIP5YMR140W AHP1P38013 176 aaKnown RBP6.43□□□□□ -1.38
SIP5YMR140W OPY1P38271 328 aa6.43□□□□□ -1.38
SIP5YMR140W ENV11P53246 860 aa6.43□□□□□ -1.38
SIP5YMR140W KRE33P53914 1056 aaKnown RBP6.43□□□□□ -1.38
SIP5YMR140W YPR053CQ6Q5F3 151 aa6.43□□□□□ -1.38
SIP5YMR140W GUA1P38625 525 aaKnown RBP6.42□□□□□ -1.38
SIP5YMR140W PLP2Q12017 286 aa6.42□□□□□ -1.38
SIP5YMR140W HAL5P38970 855 aaKnown RBP6.41□□□□□ -1.38
SIP5YMR140W NOP58Q12499 511 aaKnown RBP6.41□□□□□ -1.38
SIP5YMR140W TOP2P06786 1428 aaKnown RBP6.41□□□□□ -1.38
SIP5YMR140W TBS1P38114 1094 aa6.41□□□□□ -1.38
SIP5YMR140W BUD4P47136 1447 aa6.4□□□□□ -1.38
SIP5YMR140W YBL036CP38197 257 aa6.4□□□□□ -1.39
SIP5YMR140W NMD2P38798 1089 aaKnown RBP6.4□□□□□ -1.39
SIP5YMR140W UTP7P40055 554 aaKnown RBP6.4□□□□□ -1.39
SIP5YMR140W SBE2P42223 864 aaKnown RBP6.4□□□□□ -1.39
SIP5YMR140W PEP1P32319 1579 aa6.4□□□□□ -1.39
SIP5YMR140W YTA7P40340 1379 aa6.39□□□□□ -1.39
SIP5YMR140W LEU3P08638 886 aa6.39□□□□□ -1.39
SIP5YMR140W SRB8P25648 1427 aa6.38□□□□□ -1.39
SIP5YMR140W YDJ1P25491 409 aaKnown RBP6.38□□□□□ -1.39
SIP5YMR140W SUM1P46676 1062 aa6.38□□□□□ -1.39
SIP5YMR140W TDA6Q06466 467 aa6.38□□□□□ -1.39
SIP5YMR140W SPC110P32380 944 aa6.37□□□□□ -1.39
SIP5YMR140W SKN7P38889 622 aa6.37□□□□□ -1.39
SIP5YMR140W JJJ2P46997 583 aa6.37□□□□□ -1.39
SIP5YMR140W HPC2Q01448 625 aa6.37□□□□□ -1.39
SIP5YMR140W SMC4Q12267 1418 aa6.37□□□□□ -1.39
SIP5YMR140W SMC3P47037 1230 aa6.36□□□□□ -1.39
SIP5YMR140W NRD1P53617 575 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
SIP5YMR140W ROX1P25042 368 aa6.35□□□□□ -1.39
SIP5YMR140W SLX8P40072 274 aa6.35□□□□□ -1.39
SIP5YMR140W ATG3P40344 310 aa6.35□□□□□ -1.39
SIP5YMR140W ALA1P40825 983 aaKnown RBP6.35□□□□□ -1.39
SIP5YMR140W UTP13Q05946 817 aaKnown RBP6.35□□□□□ -1.39
SIP5YMR140W SOH1P38633 127 aa6.34□□□□□ -1.39
SIP5YMR140W YMR187CQ03236 431 aa6.34□□□□□ -1.39
SIP5YMR140W CFT1Q06632 1357 aaKnown RBP6.34□□□□□ -1.39
SIP5YMR140W MYO2P19524 1574 aaKnown RBP6.34□□□□□ -1.39
SIP5YMR140W IRE1P32361 1115 aa6.34□□□□□ -1.4
SIP5YMR140W SHM1P37292 490 aaPredicted RBP6.34□□□□□ -1.4
SIP5YMR140W RPN1P38764 993 aaKnown RBP6.34□□□□□ -1.4
SIP5YMR140W PSH1Q12161 406 aa6.34□□□□□ -1.4
SIP5YMR140W YLR419WQ06698 1435 aaKnown RBP6.33□□□□□ -1.4
SIP5YMR140W GPM1P00950 247 aaKnown RBP6.33□□□□□ -1.4
SIP5YMR140W MCX1P38323 520 aaPredicted RBP6.33□□□□□ -1.4
SIP5YMR140W BRL1P38770 471 aa6.33□□□□□ -1.4
SIP5YMR140W YNR014WP53719 212 aa6.33□□□□□ -1.4
SIP5YMR140W HDA3Q06623 655 aa6.33□□□□□ -1.4
SIP5YMR140W MMS1Q06211 1407 aa6.33□□□□□ -1.4
SIP5YMR140W NUP170P38181 1502 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms