RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C KRS1P15180 591 aaKnown RBP2.65□□□□□ -1.99
CSF1YLR087C RPL5P26321 297 aaKnown RBP2.65□□□□□ -1.99
CSF1YLR087C YKR023WP36119 530 aaKnown RBP2.65□□□□□ -1.99
CSF1YLR087C SPC110P32380 944 aa2.64□□□□□ -1.99
CSF1YLR087C IES5P40060 125 aa2.64□□□□□ -1.99
CSF1YLR087C UBX2Q04228 584 aa2.64□□□□□ -1.99
CSF1YLR087C RTP1Q12751 981 aa2.64□□□□□ -1.99
CSF1YLR087C DNF1P32660 1571 aa2.64□□□□□ -1.99
CSF1YLR087C RAD2P07276 1031 aa2.64□□□□□ -1.99
CSF1YLR087C SEC31P38968 1273 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C MPC1P53157 130 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C STE20Q03497 939 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C ETT1Q08421 412 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C APM4Q99186 491 aa2.64□□□□□ -1.99
CSF1YLR087C YCF1P39109 1515 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C RPB4P20433 221 aaPredicted RBP2.64□□□□□ -1.99
CSF1YLR087C PEX5P35056 612 aa2.64□□□□□ -1.99
CSF1YLR087C EMP47P43555 445 aa2.64□□□□□ -1.99
CSF1YLR087C YMR196WQ04336 1088 aa2.64□□□□□ -1.99
CSF1YLR087C CLB3P24870 427 aa2.64□□□□□ -1.99
CSF1YLR087C YNL058CP53947 316 aa2.64□□□□□ -1.99
CSF1YLR087C YLR326WQ06170 240 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
CSF1YLR087C MRPL40P36534 297 aa2.64□□□□□ -1.99
CSF1YLR087C HIR3P47171 1648 aa2.64□□□□□ -1.99
CSF1YLR087C PSR1Q07800 427 aa2.64□□□□□ -1.99
CSF1YLR087C RVB2Q12464 471 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C NUP157P40064 1391 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C VMA2P16140 517 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C EAF7P53911 425 aaKnown RBP2.64□□□□□ -1.99
CSF1YLR087C GIN4Q12263 1142 aa2.64□□□□□ -1.99
CSF1YLR087C MRP8P35719 219 aa2.63□□□□□ -1.99
CSF1YLR087C RPL34BP40525 121 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C PMT1P33775 817 aa2.63□□□□□ -1.99
CSF1YLR087C PSD2P53037 1138 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C VPS8P39702 1274 aa2.63□□□□□ -1.99
CSF1YLR087C VID30P53076 958 aa2.63□□□□□ -1.99
CSF1YLR087C IES3Q12345 250 aa2.63□□□□□ -1.99
CSF1YLR087C HYR1P40581 163 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C MET12P46151 657 aa2.63□□□□□ -1.99
CSF1YLR087C PRP43P53131 767 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C DCP2P53550 970 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C SGD1Q06132 899 aa2.63□□□□□ -1.99
CSF1YLR087C ADY3Q07732 790 aa2.63□□□□□ -1.99
CSF1YLR087C SSP120P39931 234 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C BNI4P53858 892 aa2.63□□□□□ -1.99
CSF1YLR087C YNL011CP53980 444 aa2.63□□□□□ -1.99
CSF1YLR087C YOR131CQ12486 218 aa2.63□□□□□ -1.99
CSF1YLR087C RPA190P10964 1664 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C PSY4P38193 441 aa2.63□□□□□ -1.99
CSF1YLR087C RCM1P53972 490 aa2.63□□□□□ -1.99
CSF1YLR087C SVL3Q03088 825 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C RPO41P13433 1351 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C INH1P01097 85 aa2.63□□□□□ -1.99
CSF1YLR087C GDT1P38301 280 aaPredicted RBP2.63□□□□□ -1.99
CSF1YLR087C MTC1P47018 478 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C UTP14Q04500 899 aaKnown RBP2.63□□□□□ -1.99
CSF1YLR087C NOT3P06102 836 aaKnown RBP2.62□□□□□ -1.99
CSF1YLR087C ZUO1P32527 433 aaKnown RBP2.62□□□□□ -1.99
CSF1YLR087C PAH1P32567 862 aa2.62□□□□□ -1.99
CSF1YLR087C NFU1P32860 256 aa2.62□□□□□ -1.99
CSF1YLR087C ESC1Q03661 1658 aaKnown RBP2.62□□□□□ -1.99
CSF1YLR087C RRP43P25359 394 aaPredicted RBP2.62□□□□□ -1.99
CSF1YLR087C KRE5P22023 1365 aa2.62□□□□□ -1.99
CSF1YLR087C TY1B-DR4Q07793 1604 aa2.62□□□□□ -1.99
CSF1YLR087C TY4B-PA0A0B7P3V8 1104 aa2.62□□□□□ -1.99
CSF1YLR087C KRE2P27809 442 aa2.62□□□□□ -1.99
CSF1YLR087C TAP42Q04372 366 aa2.62□□□□□ -1.99
CSF1YLR087C KAP123P40069 1113 aaKnown RBP2.62□□□□□ -1.99
CSF1YLR087C YET3Q07451 203 aa2.62□□□□□ -1.99
CSF1YLR087C RPO31P04051 1460 aa2.62□□□□□ -1.99
CSF1YLR087C KRR1P25586 316 aaPredicted RBP2.62□□□□□ -1.99
CSF1YLR087C MCM2P29469 868 aa2.62□□□□□ -1.99
CSF1YLR087C CDC3P32457 520 aaKnown RBP2.62□□□□□ -1.99
CSF1YLR087C YOR389WQ08912 624 aa2.62□□□□□ -1.99
CSF1YLR087C BNR1P40450 1375 aa2.62□□□□□ -1.99
CSF1YLR087C LIN1P38852 340 aaPredicted RBP2.62□□□□□ -1.99
CSF1YLR087C UTP18P40362 594 aaPredicted RBP2.62□□□□□ -1.99
CSF1YLR087C POL32P47110 350 aa2.62□□□□□ -1.99
CSF1YLR087C CWC25P53854 179 aaKnown RBP2.62□□□□□ -1.99
CSF1YLR087C HOT1Q03213 719 aa2.62□□□□□ -1.99
CSF1YLR087C KOG1P38873 1557 aa2.62□□□□□ -1.99
CSF1YLR087C SMI1P32566 505 aa2.61□□□□□ -1.99
CSF1YLR087C SMC1P32908 1225 aa2.61□□□□□ -1.99
CSF1YLR087C SBE2P42223 864 aaKnown RBP2.61□□□□□ -1.99
CSF1YLR087C IOC3P43596 787 aa2.61□□□□□ -1.99
CSF1YLR087C INP2Q03824 705 aa2.61□□□□□ -1.99
CSF1YLR087C IML1P47170 1584 aa2.61□□□□□ -1.99
CSF1YLR087C TSR4P25040 408 aa2.61□□□□□ -1.99
CSF1YLR087C PEP7P32609 515 aa2.61□□□□□ -1.99
CSF1YLR087C LTV1P34078 463 aa2.61□□□□□ -1.99
CSF1YLR087C POP8P38208 133 aa2.61□□□□□ -1.99
CSF1YLR087C SPO19Q03029 223 aa2.61□□□□□ -1.99
CSF1YLR087C RNT1Q02555 471 aa2.61□□□□□ -1.99
CSF1YLR087C NIP100P33420 868 aa2.61□□□□□ -1.99
CSF1YLR087C NDC80P40460 691 aa2.61□□□□□ -1.99
CSF1YLR087C MPH1P40562 993 aa2.61□□□□□ -1.99
CSF1YLR087C TAF1P46677 1066 aa2.61□□□□□ -1.99
CSF1YLR087C TIM11P81449 96 aaPredicted RBP2.61□□□□□ -1.99
CSF1YLR087C SRL4Q03085 281 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms