RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W RAD59Q12223 238 aa7.75□□□□□ -1.17
CBF1YJR060W SDH2P21801 266 aa7.73□□□□□ -1.17
CBF1YJR060W HAP1P0CE41 1502 aa7.73□□□□□ -1.17
CBF1YJR060W RSC30P38781 883 aa7.72□□□□□ -1.17
CBF1YJR060W YDL206WQ12424 762 aa7.72□□□□□ -1.17
CBF1YJR060W PDR5P33302 1511 aaKnown RBP7.72□□□□□ -1.17
CBF1YJR060W VMR1P38735 1592 aa7.71□□□□□ -1.17
CBF1YJR060W KXD1P53158 218 aa7.71□□□□□ -1.18
CBF1YJR060W YEL077CQ3E7X8 1277 aa7.71□□□□□ -1.18
CBF1YJR060W IML1P47170 1584 aa7.69□□□□□ -1.18
CBF1YJR060W PKC1P24583 1151 aa7.68□□□□□ -1.18
CBF1YJR060W RPA14P50106 137 aa7.68□□□□□ -1.18
CBF1YJR060W ALR1Q08269 859 aa7.68□□□□□ -1.18
CBF1YJR060W AMS1P22855 1083 aa7.67□□□□□ -1.18
CBF1YJR060W DPS1P04802 557 aaKnown RBP7.66□□□□□ -1.18
CBF1YJR060W PDC1P06169 563 aaKnown RBP7.66□□□□□ -1.18
CBF1YJR060W YBL036CP38197 257 aa7.66□□□□□ -1.18
CBF1YJR060W URN1Q06525 465 aaKnown RBP7.66□□□□□ -1.18
CBF1YJR060W YPR097WQ06839 1073 aa7.66□□□□□ -1.18
CBF1YJR060W BUD21Q08492 214 aaPredicted RBP7.66□□□□□ -1.18
CBF1YJR060W YAP3P38749 330 aa7.65□□□□□ -1.18
CBF1YJR060W SSM4P40318 1319 aa7.65□□□□□ -1.18
CBF1YJR060W HXT10P43581 546 aa7.65□□□□□ -1.18
CBF1YJR060W FRK1Q03002 865 aaPredicted RBP7.65□□□□□ -1.18
CBF1YJR060W USO1P25386 1790 aa7.64□□□□□ -1.19
CBF1YJR060W RAS1P01119 309 aa7.64□□□□□ -1.19
CBF1YJR060W MOD5P07884 428 aa7.64□□□□□ -1.19
CBF1YJR060W CST6P40535 587 aa7.64□□□□□ -1.19
CBF1YJR060W BDP1P46678 594 aa7.64□□□□□ -1.19
CBF1YJR060W CSE4P36012 229 aa7.63□□□□□ -1.19
CBF1YJR060W TY1B-NL2Q99337 1749 aaKnown RBP7.62□□□□□ -1.19
CBF1YJR060W TPD3P31383 635 aa7.62□□□□□ -1.19
CBF1YJR060W MAK16P10962 306 aaPredicted RBP7.6□□□□□ -1.19
CBF1YJR060W RRD1P40454 393 aaKnown RBP7.6□□□□□ -1.19
CBF1YJR060W YJL007CP47080 104 aa7.59□□□□□ -1.19
CBF1YJR060W PUS5Q06244 254 aa7.59□□□□□ -1.19
CBF1YJR060W SPT5P27692 1063 aaKnown RBP7.54□□□□□ -1.2
CBF1YJR060W KIP2P28743 706 aa7.54□□□□□ -1.2
CBF1YJR060W IPL1P38991 367 aa7.54□□□□□ -1.2
CBF1YJR060W BIM1P40013 344 aa7.54□□□□□ -1.2
CBF1YJR060W BIO2P32451 375 aa7.53□□□□□ -1.2
CBF1YJR060W NAF1P53919 492 aaKnown RBP7.53□□□□□ -1.2
CBF1YJR060W MAK10Q02197 733 aa7.53□□□□□ -1.2
CBF1YJR060W IXR1P33417 597 aa7.52□□□□□ -1.21
CBF1YJR060W FIG4P42837 879 aa7.52□□□□□ -1.21
CBF1YJR060W YNL108CP53929 270 aa7.52□□□□□ -1.21
CBF1YJR060W SYH1Q02875 849 aaKnown RBP7.52□□□□□ -1.21
CBF1YJR060W HED1Q03937 162 aa7.52□□□□□ -1.21
CBF1YJR060W NUP192P47054 1683 aa7.51□□□□□ -1.21
CBF1YJR060W TEC1P18412 486 aa7.51□□□□□ -1.21
CBF1YJR060W YDJ1P25491 409 aaKnown RBP7.51□□□□□ -1.21
CBF1YJR060W VAC17P25591 423 aa7.51□□□□□ -1.21
CBF1YJR060W ATG32P40458 529 aa7.51□□□□□ -1.21
CBF1YJR060W CLA4P48562 842 aa7.51□□□□□ -1.21
CBF1YJR060W RPL34BP40525 121 aaKnown RBP7.5□□□□□ -1.21
CBF1YJR060W RAV1P47104 1357 aa7.48□□□□□ -1.21
CBF1YJR060W PDR11P40550 1411 aa7.48□□□□□ -1.21
CBF1YJR060W TIF1P10081 395 aaKnown RBP7.47□□□□□ -1.21
CBF1YJR060W SUP45P12385 437 aaKnown RBP7.47□□□□□ -1.21
CBF1YJR060W GUT2P32191 649 aa7.47□□□□□ -1.21
CBF1YJR060W TYS1P36421 394 aaKnown RBP7.46□□□□□ -1.22
CBF1YJR060W PAF1P38351 445 aa7.46□□□□□ -1.22
CBF1YJR060W AIR1P40507 360 aaKnown RBP7.46□□□□□ -1.22
CBF1YJR060W STE20Q03497 939 aaKnown RBP7.46□□□□□ -1.22
CBF1YJR060W ENO2P00925 437 aaKnown RBP7.45□□□□□ -1.22
CBF1YJR060W MCM16Q12262 181 aa7.45□□□□□ -1.22
CBF1YJR060W BCK1Q01389 1478 aa7.44□□□□□ -1.22
CBF1YJR060W CDC4P07834 779 aa7.44□□□□□ -1.22
CBF1YJR060W ISF1P32488 338 aa7.44□□□□□ -1.22
CBF1YJR060W RTG2P32608 588 aaKnown RBP7.44□□□□□ -1.22
CBF1YJR060W YPP1P46951 817 aa7.44□□□□□ -1.22
CBF1YJR060W YPR084WQ06821 456 aa7.44□□□□□ -1.22
CBF1YJR060W EMP47P43555 445 aa7.43□□□□□ -1.22
CBF1YJR060W NOP7P53261 605 aaKnown RBP7.42□□□□□ -1.22
CBF1YJR060W FRA1Q07825 749 aa7.42□□□□□ -1.22
CBF1YJR060W MET32Q12041 191 aa7.42□□□□□ -1.22
CBF1YJR060W TRK1P12685 1235 aa7.41□□□□□ -1.22
CBF1YJR060W MRX12P47084 519 aa7.4□□□□□ -1.22
CBF1YJR060W APP1P53933 587 aa7.4□□□□□ -1.22
CBF1YJR060W SRC1Q03707 834 aa7.4□□□□□ -1.22
CBF1YJR060W YPR204WQ08995 1032 aa7.4□□□□□ -1.22
CBF1YJR060W RTC1Q08281 1341 aa7.4□□□□□ -1.22
CBF1YJR060W CFT1Q06632 1357 aaKnown RBP7.4□□□□□ -1.22
CBF1YJR060W RIM21P48565 533 aa7.39□□□□□ -1.23
CBF1YJR060W HST3P53687 447 aa7.39□□□□□ -1.23
CBF1YJR060W SSA1P10591 642 aaKnown RBP7.38□□□□□ -1.23
CBF1YJR060W ASH1P34233 588 aa7.38□□□□□ -1.23
CBF1YJR060W MRT4P33201 236 aaKnown RBP7.37□□□□□ -1.23
CBF1YJR060W EMW1P42842 904 aaKnown RBP7.37□□□□□ -1.23
CBF1YJR060W ENO1P00924 437 aaKnown RBP7.36□□□□□ -1.23
CBF1YJR060W SUB2Q07478 446 aaKnown RBP7.36□□□□□ -1.23
CBF1YJR060W ENV9Q08651 330 aa7.36□□□□□ -1.23
CBF1YJR060W KRE5P22023 1365 aa7.35□□□□□ -1.23
CBF1YJR060W AFT1P22149 690 aa7.35□□□□□ -1.23
CBF1YJR060W GEF1P37020 779 aa7.35□□□□□ -1.23
CBF1YJR060W ATG3P40344 310 aa7.35□□□□□ -1.23
CBF1YJR060W MRX10Q05648 414 aa7.35□□□□□ -1.23
CBF1YJR060W YML020WQ03722 664 aa7.34□□□□□ -1.23
CBF1YJR060W ATG20Q07528 640 aa7.34□□□□□ -1.23
CBF1YJR060W UGA3P26370 528 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms