RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	VPS29	P38759	282 aa		2.6	□□□□□ -1.99
STH1	YIL126W	HGH1	P48362	394 aa	Known RBP	2.6	□□□□□ -1.99
STH1	YIL126W	LIF1	P53150	421 aa		2.6	□□□□□ -1.99
STH1	YIL126W	TSC11	P40061	1430 aa		2.6	□□□□□ -1.99
STH1	YIL126W	GEA1	P47102	1408 aa	Predicted RBP	2.6	□□□□□ -1.99
STH1	YIL126W	IPL1	P38991	367 aa		2.6	□□□□□ -1.99
STH1	YIL126W	PKH1	Q03407	766 aa		2.6	□□□□□ -1.99
STH1	YIL126W	YSH1	Q06224	779 aa	Predicted RBP	2.6	□□□□□ -1.99
STH1	YIL126W	NOP58	Q12499	511 aa	Known RBP	2.6	□□□□□ -1.99
STH1	YIL126W	ARO1	P08566	1588 aa	Known RBP	2.6	□□□□□ -1.99
STH1	YIL126W	RAD9	P14737	1309 aa		2.6	□□□□□ -1.99
STH1	YIL126W	LTV1	P34078	463 aa		2.6	□□□□□ -1.99
STH1	YIL126W	YNL011C	P53980	444 aa		2.6	□□□□□ -1.99
STH1	YIL126W	YPP1	P46951	817 aa		2.59	□□□□□ -1.99
STH1	YIL126W	TIM50	Q02776	476 aa		2.59	□□□□□ -1.99
STH1	YIL126W	PRP3	Q03338	469 aa	Predicted RBP	2.59	□□□□□ -1.99
STH1	YIL126W	CSE4	P36012	229 aa		2.59	□□□□□ -1.99
STH1	YIL126W	MCD4	P36051	919 aa		2.59	□□□□□ -1.99
STH1	YIL126W	YBP2	P53169	641 aa		2.59	□□□□□ -1.99
STH1	YIL126W	NST1	P53935	1240 aa		2.59	□□□□□ -1.99
STH1	YIL126W	SAS4	Q04003	481 aa		2.59	□□□□□ -1.99
STH1	YIL126W	FBP1	P09201	348 aa		2.59	□□□□□ -2
STH1	YIL126W	PWP2	P25635	923 aa	Known RBP	2.59	□□□□□ -2
STH1	YIL126W	RAM2	P29703	316 aa		2.59	□□□□□ -2
STH1	YIL126W	SPC110	P32380	944 aa		2.59	□□□□□ -2
STH1	YIL126W	AFG2	P32794	780 aa		2.59	□□□□□ -2
STH1	YIL126W	RAD54	P32863	898 aa		2.59	□□□□□ -2
STH1	YIL126W	FMO1	P38866	432 aa		2.59	□□□□□ -2
STH1	YIL126W	MMF1	P40185	145 aa	Known RBP	2.59	□□□□□ -2
STH1	YIL126W	RPL34B	P40525	121 aa	Known RBP	2.59	□□□□□ -2
STH1	YIL126W	NSE3	Q05541	303 aa		2.59	□□□□□ -2
STH1	YIL126W	PDR10	P51533	1564 aa		2.59	□□□□□ -2
STH1	YIL126W	ATF2	P53296	535 aa		2.58	□□□□□ -2
STH1	YIL126W	RAT1	Q02792	1006 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	TY1B-A	O13527	1196 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	PAH1	P32567	862 aa		2.58	□□□□□ -2
STH1	YIL126W	RRP14	P36080	434 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	UBP9	P39967	754 aa		2.58	□□□□□ -2
STH1	YIL126W	VHR2	P40041	505 aa		2.58	□□□□□ -2
STH1	YIL126W	RPN7	Q06103	429 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	ETT1	Q08421	412 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	PLP2	Q12017	286 aa		2.58	□□□□□ -2
STH1	YIL126W	ROM2	P51862	1356 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	PDI1	P17967	522 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	MAK11	P20484	414 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	DBP1	P24784	617 aa	Known RBP	2.58	□□□□□ -2
STH1	YIL126W	MSH3	P25336	1018 aa		2.58	□□□□□ -2
STH1	YIL126W	GRX4	P32642	244 aa		2.58	□□□□□ -2
STH1	YIL126W	KIC1	P38692	1080 aa		2.58	□□□□□ -2
STH1	YIL126W	LYS14	P40971	790 aa		2.58	□□□□□ -2
STH1	YIL126W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	RIP-Chip
STH1	YIL126W	LDH1	P38139	375 aa		2.58	□□□□□ -2
STH1	YIL126W	YBL036C	P38197	257 aa		2.58	□□□□□ -2
STH1	YIL126W	SMC3	P47037	1230 aa		2.57	□□□□□ -2
STH1	YIL126W	CLB1	P24868	471 aa		2.57	□□□□□ -2
STH1	YIL126W	GUA1	P38625	525 aa	Known RBP	2.57	□□□□□ -2
STH1	YIL126W	PIL1	P53252	339 aa	Known RBP	2.57	□□□□□ -2
STH1	YIL126W	CEF1	Q03654	590 aa	Predicted RBP	2.57	□□□□□ -2
STH1	YIL126W	ECM16	Q04217	1267 aa	Known RBP	2.57	□□□□□ -2
STH1	YIL126W	YPR084W	Q06821	456 aa		2.57	□□□□□ -2
STH1	YIL126W	MTR4	P47047	1073 aa	Known RBP	2.57	□□□□□ -2
STH1	YIL126W	FAA4	P47912	694 aa	Known RBP	2.57	□□□□□ -2
STH1	YIL126W	CTF4	Q01454	927 aa		2.57	□□□□□ -2
STH1	YIL126W	NYV1	Q12255	253 aa		2.57	□□□□□ -2
STH1	YIL126W	KIN1	P13185	1064 aa		2.56	□□□□□ -2
STH1	YIL126W	DEP1	P31385	405 aa		2.56	□□□□□ -2
STH1	YIL126W	ASF1	P32447	279 aa		2.56	□□□□□ -2
STH1	YIL126W	TPS3	P38426	1054 aa	Known RBP	2.56	□□□□□ -2
STH1	YIL126W	DJP1	P40564	432 aa		2.56	□□□□□ -2
STH1	YIL126W	NCS6	P53088	359 aa		2.56	□□□□□ -2
STH1	YIL126W	ESF1	Q06344	628 aa	Known RBP	2.56	□□□□□ -2
STH1	YIL126W	MET7	Q08645	548 aa		2.56	□□□□□ -2
STH1	YIL126W	RPN8	Q08723	338 aa	Known RBP	2.56	□□□□□ -2
STH1	YIL126W	SIR4	P11978	1358 aa		2.56	□□□□□ -2
STH1	YIL126W	IRE1	P32361	1115 aa		2.56	□□□□□ -2
STH1	YIL126W	YKU70	P32807	602 aa		2.56	□□□□□ -2
STH1	YIL126W	RMT2	Q03305	412 aa		2.56	□□□□□ -2
STH1	YIL126W	IDI1	P15496	288 aa		2.56	□□□□□ -2
STH1	YIL126W	RTG2	P32608	588 aa	Known RBP	2.56	□□□□□ -2
STH1	YIL126W	APL2	P36000	726 aa	Predicted RBP	2.56	□□□□□ -2
STH1	YIL126W	SEC9	P40357	651 aa		2.56	□□□□□ -2
STH1	YIL126W	YNR029C	P53729	429 aa	Known RBP	2.56	□□□□□ -2
STH1	YIL126W	YDR341C	Q05506	607 aa	Known RBP	2.56	□□□□□ -2
STH1	YIL126W	SGD1	Q06132	899 aa		2.56	□□□□□ -2
STH1	YIL126W	ESC2	Q06340	456 aa		2.56	□□□□□ -2
STH1	YIL126W	FRD1	P32614	470 aa	Known RBP	2.55	□□□□□ -2
STH1	YIL126W	HXT5	P38695	592 aa		2.55	□□□□□ -2
STH1	YIL126W	RPN11	P43588	306 aa	Known RBP	2.55	□□□□□ -2
STH1	YIL126W	RSM26	P47141	266 aa		2.55	□□□□□ -2
STH1	YIL126W	GIN4	Q12263	1142 aa		2.55	□□□□□ -2
STH1	YIL126W	VMR1	P38735	1592 aa		2.55	□□□□□ -2
STH1	YIL126W	LEU2	P04173	364 aa	Predicted RBP	2.55	□□□□□ -2
STH1	YIL126W	IME2	P32581	645 aa		2.55	□□□□□ -2
STH1	YIL126W	RRP8	P38961	392 aa	Known RBP	2.55	□□□□□ -2
STH1	YIL126W	BDP1	P46678	594 aa		2.55	□□□□□ -2
STH1	YIL126W	MDM38	Q08179	573 aa		2.55	□□□□□ -2
STH1	YIL126W	TYW1	Q08960	810 aa	Known RBP	2.55	□□□□□ -2
STH1	YIL126W	SRB8	P25648	1427 aa		2.55	□□□□□ -2
STH1	YIL126W	SSP2	Q08646	371 aa		2.55	□□□□□ -2
STH1	YIL126W	HEM1	P09950	548 aa	Predicted RBP	2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms