RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C THI12P42883 340 aa4.83□□□□□ -1.64
SHQ1YIL104C THI5P43534 340 aa4.83□□□□□ -1.64
SHQ1YIL104C THI11P47183 340 aa4.83□□□□□ -1.64
SHQ1YIL104C YNL115CP53925 644 aa4.83□□□□□ -1.64
SHQ1YIL104C THI13Q07748 340 aa4.83□□□□□ -1.64
SHQ1YIL104C KXD1P53158 218 aa4.82□□□□□ -1.64
SHQ1YIL104C RAD9P14737 1309 aa4.82□□□□□ -1.64
SHQ1YIL104C RTC1Q08281 1341 aa4.82□□□□□ -1.64
SHQ1YIL104C GCN2P15442 1659 aa4.81□□□□□ -1.64
SHQ1YIL104C PBS2P08018 668 aa4.81□□□□□ -1.64
SHQ1YIL104C TPD3P31383 635 aa4.81□□□□□ -1.64
SHQ1YIL104C MSB3P48566 633 aaPredicted RBP4.81□□□□□ -1.64
SHQ1YIL104C KRE5P22023 1365 aa4.81□□□□□ -1.64
SHQ1YIL104C ALD4P46367 519 aaKnown RBP4.8□□□□□ -1.64
SHQ1YIL104C SYH1Q02875 849 aaKnown RBP4.8□□□□□ -1.64
SHQ1YIL104C CFT1Q06632 1357 aaKnown RBP4.8□□□□□ -1.64
SHQ1YIL104C YMR196WQ04336 1088 aa4.79□□□□□ -1.64
SHQ1YIL104C CAB1Q04430 367 aa4.79□□□□□ -1.64
SHQ1YIL104C RIA1P53893 1110 aa4.78□□□□□ -1.64
SHQ1YIL104C YLR346CQ06139 101 aa4.78□□□□□ -1.64
SHQ1YIL104C NUP192P47054 1683 aa4.78□□□□□ -1.64
SHQ1YIL104C SIT4P20604 311 aa4.77□□□□□ -1.65
SHQ1YIL104C ACO2P39533 789 aa4.77□□□□□ -1.65
SHQ1YIL104C HXT10P43581 546 aa4.77□□□□□ -1.65
SHQ1YIL104C YNR029CP53729 429 aaKnown RBP4.77□□□□□ -1.65
SHQ1YIL104C CAF120P53836 1060 aa4.77□□□□□ -1.65
SHQ1YIL104C MTC5Q03897 1148 aa4.77□□□□□ -1.65
SHQ1YIL104C UGA3P26370 528 aa4.77□□□□□ -1.65
SHQ1YIL104C PAF1P38351 445 aa4.77□□□□□ -1.65
SHQ1YIL104C MAM3Q12296 706 aa4.77□□□□□ -1.65
SHQ1YIL104C SRF1Q12516 437 aa4.77□□□□□ -1.65
SHQ1YIL104C BCK1Q01389 1478 aa4.76□□□□□ -1.65
SHQ1YIL104C TAF5P38129 798 aa4.76□□□□□ -1.65
SHQ1YIL104C TEA1P47988 759 aa4.76□□□□□ -1.65
SHQ1YIL104C PDC1P06169 563 aaKnown RBP4.74□□□□□ -1.65
SHQ1YIL104C MRX12P47084 519 aa4.74□□□□□ -1.65
SHQ1YIL104C PTK2P47116 818 aaKnown RBP4.74□□□□□ -1.65
SHQ1YIL104C NOP7P53261 605 aaKnown RBP4.74□□□□□ -1.65
SHQ1YIL104C OPT2Q06593 877 aa4.74□□□□□ -1.65
SHQ1YIL104C TAF8Q03750 510 aa4.73□□□□□ -1.65
SHQ1YIL104C USO1P25386 1790 aa4.73□□□□□ -1.65
SHQ1YIL104C TRK2P28584 889 aa4.72□□□□□ -1.65
SHQ1YIL104C KIP2P28743 706 aa4.72□□□□□ -1.65
SHQ1YIL104C YGR035CP53222 116 aa4.72□□□□□ -1.65
SHQ1YIL104C TY3B-IQ7LHG5 1498 aaKnown RBP4.72□□□□□ -1.65
SHQ1YIL104C PPH3P32345 308 aa4.72□□□□□ -1.65
SHQ1YIL104C GLY1P37303 387 aaKnown RBP4.72□□□□□ -1.65
SHQ1YIL104C ESL2P36168 1195 aa4.71□□□□□ -1.66
SHQ1YIL104C IES2P40154 320 aa4.71□□□□□ -1.66
SHQ1YIL104C NUP85P46673 744 aa4.71□□□□□ -1.66
SHQ1YIL104C NIS1P53939 407 aa4.71□□□□□ -1.66
SHQ1YIL104C ORC1P54784 914 aaPredicted RBP4.71□□□□□ -1.66
SHQ1YIL104C ALR1Q08269 859 aa4.71□□□□□ -1.66
SHQ1YIL104C TYW1Q08960 810 aaKnown RBP4.71□□□□□ -1.66
SHQ1YIL104C SLY41P22215 453 aa4.7□□□□□ -1.66
SHQ1YIL104C RPA14P50106 137 aa4.7□□□□□ -1.66
SHQ1YIL104C TY1B-NL2Q99337 1749 aaKnown RBP4.7□□□□□ -1.66
SHQ1YIL104C MRT4P33201 236 aaKnown RBP4.69□□□□□ -1.66
SHQ1YIL104C IXR1P33417 597 aa4.69□□□□□ -1.66
SHQ1YIL104C SCW11P53189 542 aa4.69□□□□□ -1.66
SHQ1YIL104C RCM1P53972 490 aa4.69□□□□□ -1.66
SHQ1YIL104C TBF1Q02457 562 aa4.69□□□□□ -1.66
SHQ1YIL104C MIP1P15801 1254 aa4.68□□□□□ -1.66
SHQ1YIL104C CPS1P27614 576 aa4.68□□□□□ -1.66
SHQ1YIL104C DSF2P38213 736 aa4.68□□□□□ -1.66
SHQ1YIL104C KIP3P53086 805 aaKnown RBP4.68□□□□□ -1.66
SHQ1YIL104C PUS6P53294 404 aa4.68□□□□□ -1.66
SHQ1YIL104C APP1P53933 587 aa4.68□□□□□ -1.66
SHQ1YIL104C SPE2P21182 396 aa4.67□□□□□ -1.66
SHQ1YIL104C YPR097WQ06839 1073 aa4.67□□□□□ -1.66
SHQ1YIL104C YIR007WP40566 764 aa4.67□□□□□ -1.66
SHQ1YIL104C NUP42P49686 430 aaKnown RBP4.66□□□□□ -1.66
SHQ1YIL104C FPK1P53739 893 aa4.66□□□□□ -1.66
SHQ1YIL104C HPF1Q05164 967 aa4.66□□□□□ -1.66
SHQ1YIL104C YDL206WQ12424 762 aa4.66□□□□□ -1.66
SHQ1YIL104C YML133CQ03099 1374 aa4.65□□□□□ -1.66
SHQ1YIL104C YLL067CQ07888 1374 aa4.65□□□□□ -1.66
SHQ1YIL104C YLL066CQ99208 1374 aa4.65□□□□□ -1.66
SHQ1YIL104C TY1A-BLQ12266 440 aa4.65□□□□□ -1.67
SHQ1YIL104C CHZ1P40019 153 aaPredicted RBP4.64□□□□□ -1.67
SHQ1YIL104C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
SHQ1YIL104C ARG82P07250 355 aa4.63□□□□□ -1.67
SHQ1YIL104C LSC2P53312 427 aa4.63□□□□□ -1.67
SHQ1YIL104C UBP2Q01476 1272 aa4.63□□□□□ -1.67
SHQ1YIL104C YPR204WQ08995 1032 aa4.63□□□□□ -1.67
SHQ1YIL104C ENT1Q12518 454 aa4.63□□□□□ -1.67
SHQ1YIL104C YLR419WQ06698 1435 aaKnown RBP4.63□□□□□ -1.67
SHQ1YIL104C PSK1P31374 1356 aa4.62□□□□□ -1.67
SHQ1YIL104C PRP43P53131 767 aaKnown RBP4.62□□□□□ -1.67
SHQ1YIL104C ADE6P38972 1358 aaKnown RBP4.61□□□□□ -1.67
SHQ1YIL104C TRM1P15565 570 aaKnown RBP4.61□□□□□ -1.67
SHQ1YIL104C DIT2P21595 489 aa4.6□□□□□ -1.67
SHQ1YIL104C GLN1P32288 370 aaKnown RBP4.6□□□□□ -1.67
SHQ1YIL104C ICP55P40051 511 aa4.6□□□□□ -1.67
SHQ1YIL104C AAD14P42884 376 aa4.6□□□□□ -1.67
SHQ1YIL104C HST2P53686 357 aa4.6□□□□□ -1.67
SHQ1YIL104C RPS24AP0CX31 135 aaKnown RBP4.59□□□□□ -1.67
SHQ1YIL104C RPS24BP0CX32 135 aaKnown RBP4.59□□□□□ -1.67
SHQ1YIL104C PRP5P21372 849 aaPredicted RBP4.59□□□□□ -1.67
SHQ1YIL104C NAP1P25293 417 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms