RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C BSD2P38356 321 aa6.25□□□□□ -1.41
PXR1YGR280C ELP4Q02884 456 aaKnown RBP6.25□□□□□ -1.41
PXR1YGR280C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
PXR1YGR280C RPO41P13433 1351 aaKnown RBP6.25□□□□□ -1.41
PXR1YGR280C YMR084WA2P2R3 262 aa6.24□□□□□ -1.41
PXR1YGR280C PEA2P40091 420 aa6.24□□□□□ -1.41
PXR1YGR280C PSD2P53037 1138 aaKnown RBP6.24□□□□□ -1.41
PXR1YGR280C TAO3P40468 2376 aa6.24□□□□□ -1.41
PXR1YGR280C TOR1P35169 2470 aa6.23□□□□□ -1.41
PXR1YGR280C DBP1P24784 617 aaKnown RBP6.23□□□□□ -1.41
PXR1YGR280C YKU70P32807 602 aa6.23□□□□□ -1.41
PXR1YGR280C FET4P40988 552 aa6.23□□□□□ -1.41
PXR1YGR280C MSM1P22438 575 aa6.22□□□□□ -1.41
PXR1YGR280C PTC4P38089 393 aa6.22□□□□□ -1.41
PXR1YGR280C RCR1P38212 213 aa6.22□□□□□ -1.41
PXR1YGR280C MTR4P47047 1073 aaKnown RBP6.22□□□□□ -1.41
PXR1YGR280C CWC15Q03772 175 aaKnown RBP6.22□□□□□ -1.41
PXR1YGR280C TYW1Q08960 810 aaKnown RBP6.22□□□□□ -1.41
PXR1YGR280C YLL066CQ99208 1374 aa6.21□□□□□ -1.41
PXR1YGR280C LEU2P04173 364 aaPredicted RBP6.21□□□□□ -1.42
PXR1YGR280C MRM1P25270 412 aa6.21□□□□□ -1.42
PXR1YGR280C PRP43P53131 767 aaKnown RBP6.21□□□□□ -1.42
PXR1YGR280C NST1P53935 1240 aa6.21□□□□□ -1.42
PXR1YGR280C NUM1Q00402 2748 aa6.2□□□□□ -1.42
PXR1YGR280C HVG1P0CE11 249 aa6.2□□□□□ -1.42
PXR1YGR280C RSC30P38781 883 aa6.2□□□□□ -1.42
PXR1YGR280C YMR1P47147 688 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
PXR1YGR280C TIM50Q02776 476 aa6.2□□□□□ -1.42
PXR1YGR280C IRC3Q06683 689 aa6.2□□□□□ -1.42
PXR1YGR280C SIR4P11978 1358 aa6.19□□□□□ -1.42
PXR1YGR280C YLL067CQ07888 1374 aa6.19□□□□□ -1.42
PXR1YGR280C CST9Q06032 482 aa6.19□□□□□ -1.42
PXR1YGR280C HTA1P04911 132 aaKnown RBP6.18□□□□□ -1.42
PXR1YGR280C HTA2P04912 132 aa6.18□□□□□ -1.42
PXR1YGR280C GLC3P32775 704 aa6.18□□□□□ -1.42
PXR1YGR280C DLD1P32891 587 aa6.18□□□□□ -1.42
PXR1YGR280C YEL023CP39992 682 aa6.18□□□□□ -1.42
PXR1YGR280C ERO1Q03103 563 aa6.18□□□□□ -1.42
PXR1YGR280C CSR2Q12734 1121 aa6.18□□□□□ -1.42
PXR1YGR280C YIL177CP40434 1758 aa6.17□□□□□ -1.42
PXR1YGR280C YJL225CP40889 1758 aa6.17□□□□□ -1.42
PXR1YGR280C ESL2P36168 1195 aa6.17□□□□□ -1.42
PXR1YGR280C YPL062WQ02781 134 aa6.17□□□□□ -1.42
PXR1YGR280C FAS2P19097 1887 aaKnown RBP6.17□□□□□ -1.42
PXR1YGR280C CLA4P48562 842 aa6.16□□□□□ -1.42
PXR1YGR280C GRX6Q12438 231 aa6.16□□□□□ -1.42
PXR1YGR280C EMP47P43555 445 aa6.15□□□□□ -1.42
PXR1YGR280C YBP2P53169 641 aa6.15□□□□□ -1.42
PXR1YGR280C EAR1Q03212 550 aa6.15□□□□□ -1.42
PXR1YGR280C LPD1P09624 499 aaKnown RBP6.14□□□□□ -1.43
PXR1YGR280C APE3P37302 537 aaKnown RBP6.14□□□□□ -1.43
PXR1YGR280C TRM44Q02648 567 aaKnown RBP6.14□□□□□ -1.43
PXR1YGR280C GYP5Q12344 894 aa6.14□□□□□ -1.43
PXR1YGR280C OSM1P21375 501 aaKnown RBP6.13□□□□□ -1.43
PXR1YGR280C PAH1P32567 862 aa6.13□□□□□ -1.43
PXR1YGR280C MOT2P34909 587 aaKnown RBP6.13□□□□□ -1.43
PXR1YGR280C VPS29P38759 282 aa6.13□□□□□ -1.43
PXR1YGR280C NOP7P53261 605 aaKnown RBP6.13□□□□□ -1.43
PXR1YGR280C CAF20P12962 161 aaKnown RBP6.12□□□□□ -1.43
PXR1YGR280C FIG2P25653 1609 aa6.12□□□□□ -1.43
PXR1YGR280C DCW1P36091 449 aa6.12□□□□□ -1.43
PXR1YGR280C PCS60P38137 543 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
PXR1YGR280C STS1P38637 319 aa6.12□□□□□ -1.43
PXR1YGR280C BUD27P43573 796 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
PXR1YGR280C MGA2P40578 1113 aa6.11□□□□□ -1.43
PXR1YGR280C SGD1Q06132 899 aa6.11□□□□□ -1.43
PXR1YGR280C BDF2Q07442 638 aa6.11□□□□□ -1.43
PXR1YGR280C HPR1P17629 752 aaKnown RBP6.1□□□□□ -1.43
PXR1YGR280C PNT1P38969 423 aa6.1□□□□□ -1.43
PXR1YGR280C ARH1P48360 493 aa6.1□□□□□ -1.43
PXR1YGR280C VPS4P52917 437 aa6.1□□□□□ -1.43
PXR1YGR280C RRT6P53117 311 aaPredicted RBP6.1□□□□□ -1.43
PXR1YGR280C PML39Q03760 334 aa6.1□□□□□ -1.43
PXR1YGR280C GAS4Q08271 471 aa6.1□□□□□ -1.43
PXR1YGR280C TEA1P47988 759 aa6.09□□□□□ -1.43
PXR1YGR280C YGR117CP53270 476 aa6.09□□□□□ -1.43
PXR1YGR280C SSM4P40318 1319 aa6.08□□□□□ -1.44
PXR1YGR280C RAT1Q02792 1006 aaKnown RBP6.08□□□□□ -1.44
PXR1YGR280C SIT4P20604 311 aa6.07□□□□□ -1.44
PXR1YGR280C RBA50Q04418 439 aa6.07□□□□□ -1.44
PXR1YGR280C DPL1Q05567 589 aa6.07□□□□□ -1.44
PXR1YGR280C INP54Q08227 384 aaKnown RBP6.07□□□□□ -1.44
PXR1YGR280C IKI3Q06706 1349 aaKnown RBP6.06□□□□□ -1.44
PXR1YGR280C SER1P33330 395 aaKnown RBP6.06□□□□□ -1.44
PXR1YGR280C TOR2P32600 2474 aaKnown RBP6.05□□□□□ -1.44
PXR1YGR280C SPE2P21182 396 aa6.05□□□□□ -1.44
PXR1YGR280C HSP104P31539 908 aaKnown RBP6.04□□□□□ -1.44
PXR1YGR280C RPN1P38764 993 aaKnown RBP6.04□□□□□ -1.44
PXR1YGR280C ULP1Q02724 621 aa6.04□□□□□ -1.44
PXR1YGR280C SAS4Q04003 481 aa6.04□□□□□ -1.44
PXR1YGR280C RAS1P01119 309 aa6.03□□□□□ -1.44
PXR1YGR280C SPT23P35210 1082 aa6.03□□□□□ -1.44
PXR1YGR280C RTG3P38165 486 aa6.03□□□□□ -1.44
PXR1YGR280C SEN54Q02825 467 aaPredicted RBP6.03□□□□□ -1.44
PXR1YGR280C YLR225CQ05948 407 aaKnown RBP6.03□□□□□ -1.44
PXR1YGR280C DIB1Q06819 143 aaPredicted RBP6.03□□□□□ -1.44
PXR1YGR280C PMD1P32634 1753 aa6.03□□□□□ -1.44
PXR1YGR280C STV1P37296 890 aa6.02□□□□□ -1.45
PXR1YGR280C PSF2P40359 213 aa6.02□□□□□ -1.45
PXR1YGR280C ASH1P34233 588 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms