RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C ALD2P47771 506 aa7.17□□□□□ -1.26
RPT6YGL048C AUS1Q08409 1394 aa7.17□□□□□ -1.26
RPT6YGL048C YIL177CP40434 1758 aa7.16□□□□□ -1.26
RPT6YGL048C YJL225CP40889 1758 aa7.16□□□□□ -1.26
RPT6YGL048C FKS3Q04952 1785 aa7.16□□□□□ -1.26
RPT6YGL048C PDI1P17967 522 aaKnown RBP7.16□□□□□ -1.26
RPT6YGL048C PRP40P33203 583 aaKnown RBP7.16□□□□□ -1.26
RPT6YGL048C NMA111P53920 997 aa7.16□□□□□ -1.26
RPT6YGL048C TAP42Q04372 366 aa7.16□□□□□ -1.26
RPT6YGL048C ISU2Q12056 156 aa7.16□□□□□ -1.26
RPT6YGL048C YRF1-4O13559 1382 aa7.16□□□□□ -1.26
RPT6YGL048C SIR4P11978 1358 aa7.16□□□□□ -1.26
RPT6YGL048C APC1P53886 1748 aa7.15□□□□□ -1.26
RPT6YGL048C ADE16P54113 591 aaKnown RBP7.15□□□□□ -1.26
RPT6YGL048C CSC1Q06538 782 aa7.15□□□□□ -1.26
RPT6YGL048C CDC73Q06697 393 aa7.15□□□□□ -1.26
RPT6YGL048C SPT23P35210 1082 aa7.14□□□□□ -1.27
RPT6YGL048C PEX21P50091 288 aa7.14□□□□□ -1.27
RPT6YGL048C RTF1P53064 558 aa7.14□□□□□ -1.27
RPT6YGL048C BNI4P53858 892 aa7.14□□□□□ -1.27
RPT6YGL048C FRK1Q03002 865 aaPredicted RBP7.14□□□□□ -1.27
RPT6YGL048C GRX4P32642 244 aa7.13□□□□□ -1.27
RPT6YGL048C ORC6P38826 435 aa7.13□□□□□ -1.27
RPT6YGL048C MEC3Q02574 474 aa7.13□□□□□ -1.27
RPT6YGL048C HIM1Q06674 414 aa7.13□□□□□ -1.27
RPT6YGL048C TFB4Q12004 338 aa7.13□□□□□ -1.27
RPT6YGL048C RPO41P13433 1351 aaKnown RBP7.12□□□□□ -1.27
RPT6YGL048C SEC3P33332 1336 aaKnown RBP7.12□□□□□ -1.27
RPT6YGL048C DMA2P53924 522 aa7.12□□□□□ -1.27
RPT6YGL048C PSE1P32337 1089 aaKnown RBP7.1□□□□□ -1.27
RPT6YGL048C PDS5Q04264 1277 aa7.1□□□□□ -1.27
RPT6YGL048C SSA1P10591 642 aaKnown RBP7.09□□□□□ -1.27
RPT6YGL048C GAP1P19145 602 aaPredicted RBP7.09□□□□□ -1.27
RPT6YGL048C SIS2P36024 562 aa7.09□□□□□ -1.27
RPT6YGL048C PTC2P39966 464 aaKnown RBP7.09□□□□□ -1.27
RPT6YGL048C INP54Q08227 384 aaKnown RBP7.09□□□□□ -1.27
RPT6YGL048C MHP1P43638 1398 aa7.08□□□□□ -1.28
RPT6YGL048C OSM1P21375 501 aaKnown RBP7.08□□□□□ -1.28
RPT6YGL048C YDR344CQ05510 147 aa7.08□□□□□ -1.28
RPT6YGL048C SPT7P35177 1332 aa7.07□□□□□ -1.28
RPT6YGL048C MVP1P40959 511 aaKnown RBP7.07□□□□□ -1.28
RPT6YGL048C NUP42P49686 430 aaKnown RBP7.07□□□□□ -1.28
RPT6YGL048C CLB5P30283 435 aa7.06□□□□□ -1.28
RPT6YGL048C BCK2P33306 851 aa7.06□□□□□ -1.28
RPT6YGL048C ATG13Q06628 738 aa7.06□□□□□ -1.28
RPT6YGL048C SNF2P22082 1703 aa7.06□□□□□ -1.28
RPT6YGL048C RGR1P19263 1082 aa7.05□□□□□ -1.28
RPT6YGL048C POL5P39985 1022 aaKnown RBP7.05□□□□□ -1.28
RPT6YGL048C ALD3P54114 506 aa7.05□□□□□ -1.28
RPT6YGL048C YML082WQ04533 649 aaKnown RBP7.05□□□□□ -1.28
RPT6YGL048C TUM1Q08686 304 aaKnown RBP7.05□□□□□ -1.28
RPT6YGL048C RAD4P14736 754 aa7.04□□□□□ -1.28
RPT6YGL048C TOS1P38288 455 aa7.04□□□□□ -1.28
RPT6YGL048C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
RPT6YGL048C DSD1P53095 428 aa7.04□□□□□ -1.28
RPT6YGL048C YNR021WP53723 404 aaKnown RBP7.04□□□□□ -1.28
RPT6YGL048C GRX1P25373 110 aaKnown RBP7.03□□□□□ -1.28
RPT6YGL048C NUP145P49687 1317 aa7.02□□□□□ -1.28
RPT6YGL048C TRK1P12685 1235 aa7.02□□□□□ -1.29
RPT6YGL048C KAR2P16474 682 aaKnown RBP7.02□□□□□ -1.29
RPT6YGL048C DIT2P21595 489 aa7.02□□□□□ -1.29
RPT6YGL048C CTF4Q01454 927 aa7.02□□□□□ -1.29
RPT6YGL048C YRR1Q12172 810 aa7.02□□□□□ -1.29
RPT6YGL048C MLP1Q02455 1875 aaKnown RBP7.02□□□□□ -1.29
RPT6YGL048C SNU71P53207 620 aaKnown RBP7.01□□□□□ -1.29
RPT6YGL048C UTP22P53254 1237 aaPredicted RBP7.01□□□□□ -1.29
RPT6YGL048C BUG1Q12191 341 aa7.01□□□□□ -1.29
RPT6YGL048C TOP1P04786 769 aa7□□□□□ -1.29
RPT6YGL048C HSP104P31539 908 aaKnown RBP7□□□□□ -1.29
RPT6YGL048C VRP1P37370 817 aa7□□□□□ -1.29
RPT6YGL048C YFR016CP43597 1233 aaKnown RBP7□□□□□ -1.29
RPT6YGL048C EAF6P47128 113 aa7□□□□□ -1.29
RPT6YGL048C YPR109WQ06104 294 aa7□□□□□ -1.29
RPT6YGL048C AKL1P38080 1108 aaKnown RBP6.99□□□□□ -1.29
RPT6YGL048C YBP2P53169 641 aa6.99□□□□□ -1.29
RPT6YGL048C ATF2P53296 535 aa6.99□□□□□ -1.29
RPT6YGL048C NPL4P33755 580 aa6.98□□□□□ -1.29
RPT6YGL048C TEA1P47988 759 aa6.98□□□□□ -1.29
RPT6YGL048C RLF2Q12495 606 aa6.98□□□□□ -1.29
RPT6YGL048C PDR1P12383 1068 aa6.97□□□□□ -1.29
RPT6YGL048C RRP46P53256 223 aaPredicted RBP6.97□□□□□ -1.29
RPT6YGL048C NYV1Q12255 253 aa6.97□□□□□ -1.29
RPT6YGL048C NUD1P32336 851 aa6.96□□□□□ -1.3
RPT6YGL048C NTH2P35172 780 aa6.96□□□□□ -1.3
RPT6YGL048C RPN1P38764 993 aaKnown RBP6.96□□□□□ -1.3
RPT6YGL048C SAP155P43612 1002 aa6.96□□□□□ -1.3
RPT6YGL048C PAP2P53632 584 aaKnown RBP6.96□□□□□ -1.3
RPT6YGL048C RIX7Q07844 837 aaKnown RBP6.96□□□□□ -1.3
RPT6YGL048C AIM7Q12156 149 aa6.96□□□□□ -1.3
RPT6YGL048C RAM1P22007 431 aa6.95□□□□□ -1.3
RPT6YGL048C ERT1P38140 529 aa6.95□□□□□ -1.3
RPT6YGL048C XDJ1P39102 459 aa6.95□□□□□ -1.3
RPT6YGL048C MSN5P52918 1224 aa6.94□□□□□ -1.3
RPT6YGL048C KIN4Q01919 800 aa6.94□□□□□ -1.3
RPT6YGL048C AOS1Q06624 347 aa6.94□□□□□ -1.3
RPT6YGL048C CTT1P06115 562 aa6.93□□□□□ -1.3
RPT6YGL048C GLC3P32775 704 aa6.93□□□□□ -1.3
RPT6YGL048C HPC2Q01448 625 aa6.93□□□□□ -1.3
RPT6YGL048C RIM15P43565 1770 aa6.92□□□□□ -1.3
RPT6YGL048C RMT2Q03305 412 aa6.92□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms