RNA–Protein interactions for RNA: YDR138W

HPR1, Transcript of Subunit of THO/TREX complexes, yeastyeast

Gene HPR1, Length 2,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPR1YDR138W SSF2Q12153 453 aaPredicted RBP5.68□□□□□ -1.5
HPR1YDR138W UBP1P25037 809 aa5.67□□□□□ -1.5
HPR1YDR138W YBR197CP38306 217 aa5.67□□□□□ -1.5
HPR1YDR138W VNX1P42839 908 aa5.67□□□□□ -1.5
HPR1YDR138W PIN2Q12057 282 aa5.67□□□□□ -1.5
HPR1YDR138W APC11Q12157 165 aa5.67□□□□□ -1.5
HPR1YDR138W YPR015CQ12531 247 aa5.67□□□□□ -1.5
HPR1YDR138W VAN1P23642 535 aa5.67□□□□□ -1.5
HPR1YDR138W BUD6P41697 788 aa5.67□□□□□ -1.5
HPR1YDR138W CAB1Q04430 367 aa5.67□□□□□ -1.5
HPR1YDR138W ALR1Q08269 859 aa5.67□□□□□ -1.5
HPR1YDR138W GCD11P32481 527 aaKnown RBP5.66□□□□□ -1.5
HPR1YDR138W NTH2P35172 780 aa5.65□□□□□ -1.5
HPR1YDR138W ATG3P40344 310 aa5.65□□□□□ -1.5
HPR1YDR138W ULI1P43604 169 aa5.65□□□□□ -1.5
HPR1YDR138W NGR1P32831 672 aaKnown RBP5.65□□□□□ -1.51
HPR1YDR138W NPL4P33755 580 aa5.64□□□□□ -1.51
HPR1YDR138W HXT10P43581 546 aa5.64□□□□□ -1.51
HPR1YDR138W ELP4Q02884 456 aaKnown RBP5.64□□□□□ -1.51
HPR1YDR138W MOD5P07884 428 aa5.63□□□□□ -1.51
HPR1YDR138W RPS26AP39938 119 aaKnown RBP5.63□□□□□ -1.51
HPR1YDR138W RPS26BP39939 119 aaKnown RBP5.63□□□□□ -1.51
HPR1YDR138W ALG12P53730 551 aa5.63□□□□□ -1.51
HPR1YDR138W TRS33Q99394 268 aa5.63□□□□□ -1.51
HPR1YDR138W YNL035CP53962 389 aaKnown RBP5.63□□□□□ -1.51
HPR1YDR138W ISC10P32645 267 aa5.62□□□□□ -1.51
HPR1YDR138W TIF11P38912 153 aaKnown RBP5.62□□□□□ -1.51
HPR1YDR138W RPN4Q03465 531 aa5.62□□□□□ -1.51
HPR1YDR138W NSE3Q05541 303 aa5.62□□□□□ -1.51
HPR1YDR138W SWI5P08153 709 aa5.61□□□□□ -1.51
HPR1YDR138W RPS6AP0CX37 236 aaKnown RBP5.61□□□□□ -1.51
HPR1YDR138W RPS6BP0CX38 236 aaPredicted RBP5.61□□□□□ -1.51
HPR1YDR138W TPD3P31383 635 aa5.61□□□□□ -1.51
HPR1YDR138W RRD1P40454 393 aaKnown RBP5.61□□□□□ -1.51
HPR1YDR138W RRN7P40992 514 aa5.61□□□□□ -1.51
HPR1YDR138W CYC8P14922 966 aa5.6□□□□□ -1.51
HPR1YDR138W SRP40P32583 406 aaPredicted RBP5.6□□□□□ -1.51
HPR1YDR138W YJR008WP47085 338 aa5.6□□□□□ -1.51
HPR1YDR138W HAP5Q02516 242 aa5.6□□□□□ -1.51
HPR1YDR138W TOP1P04786 769 aa5.6□□□□□ -1.51
HPR1YDR138W CYT1P07143 309 aa5.6□□□□□ -1.51
HPR1YDR138W ATG20Q07528 640 aa5.6□□□□□ -1.51
HPR1YDR138W YKL091CP33324 310 aaKnown RBP5.59□□□□□ -1.51
HPR1YDR138W HXT5P38695 592 aa5.59□□□□□ -1.51
HPR1YDR138W PBP2P38151 413 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
HPR1YDR138W FAA3P39002 694 aa5.59□□□□□ -1.51
HPR1YDR138W SPR3P41901 512 aa5.59□□□□□ -1.51
HPR1YDR138W FOX2Q02207 900 aaKnown RBP5.59□□□□□ -1.51
HPR1YDR138W BDF2Q07442 638 aa5.59□□□□□ -1.51
HPR1YDR138W RTG1P32607 177 aa5.58□□□□□ -1.52
HPR1YDR138W PPG1P32838 368 aa5.58□□□□□ -1.52
HPR1YDR138W URN1Q06525 465 aaKnown RBP5.58□□□□□ -1.52
HPR1YDR138W UBX5Q06682 500 aa5.58□□□□□ -1.52
HPR1YDR138W PPM2Q08282 695 aa5.58□□□□□ -1.52
HPR1YDR138W HXK1P04806 485 aaKnown RBP5.57□□□□□ -1.52
HPR1YDR138W YFL034WP43564 1073 aa5.57□□□□□ -1.52
HPR1YDR138W ARH1P48360 493 aa5.57□□□□□ -1.52
HPR1YDR138W YGR122WP53272 402 aa5.57□□□□□ -1.52
HPR1YDR138W SEC61P32915 480 aa5.57□□□□□ -1.52
HPR1YDR138W MAD1P40957 749 aa5.57□□□□□ -1.52
HPR1YDR138W KXD1P53158 218 aa5.57□□□□□ -1.52
HPR1YDR138W LDB19Q12502 818 aa5.57□□□□□ -1.52
HPR1YDR138W BDS1Q08347 646 aa5.56□□□□□ -1.52
HPR1YDR138W APP1P53933 587 aa5.55□□□□□ -1.52
HPR1YDR138W YNL011CP53980 444 aa5.55□□□□□ -1.52
HPR1YDR138W CDC55Q00362 526 aa5.55□□□□□ -1.52
HPR1YDR138W RMD1Q03441 430 aa5.55□□□□□ -1.52
HPR1YDR138W PRT1P06103 763 aaKnown RBP5.55□□□□□ -1.52
HPR1YDR138W DUT1P33317 147 aa5.55□□□□□ -1.52
HPR1YDR138W UFD2P54860 961 aa5.55□□□□□ -1.52
HPR1YDR138W YPQ2Q06328 317 aa5.55□□□□□ -1.52
HPR1YDR138W RAD2P07276 1031 aa5.54□□□□□ -1.52
HPR1YDR138W GRX1P25373 110 aaKnown RBP5.54□□□□□ -1.52
HPR1YDR138W RRP14P36080 434 aaKnown RBP5.54□□□□□ -1.52
HPR1YDR138W SUT1P53032 299 aaKnown RBP5.54□□□□□ -1.52
HPR1YDR138W SPP1Q03012 353 aa5.54□□□□□ -1.52
HPR1YDR138W SPT2P06843 333 aaPredicted RBP5.54□□□□□ -1.52
HPR1YDR138W MRPL33P20084 86 aa5.54□□□□□ -1.52
HPR1YDR138W TSR4P25040 408 aa5.54□□□□□ -1.52
HPR1YDR138W PEP7P32609 515 aa5.54□□□□□ -1.52
HPR1YDR138W VPS35P34110 944 aa5.54□□□□□ -1.52
HPR1YDR138W NUG1P40010 520 aaKnown RBP5.54□□□□□ -1.52
HPR1YDR138W EMW1P42842 904 aaKnown RBP5.54□□□□□ -1.52
HPR1YDR138W BNI4P53858 892 aa5.54□□□□□ -1.52
HPR1YDR138W YDL129WQ07555 291 aa5.54□□□□□ -1.52
HPR1YDR138W GRX4P32642 244 aa5.53□□□□□ -1.52
HPR1YDR138W SWE1P32944 819 aa5.53□□□□□ -1.52
HPR1YDR138W YKL069WP36088 180 aa5.53□□□□□ -1.52
HPR1YDR138W FAA4P47912 694 aaKnown RBP5.53□□□□□ -1.52
HPR1YDR138W HUL5P53119 910 aa5.53□□□□□ -1.52
HPR1YDR138W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52 RIP-Chip
HPR1YDR138W RSC4Q02206 625 aa5.53□□□□□ -1.52
HPR1YDR138W ESF1Q06344 628 aaKnown RBP5.53□□□□□ -1.52
HPR1YDR138W CDC53Q12018 815 aaKnown RBP5.53□□□□□ -1.52
HPR1YDR138W STI1P15705 589 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
HPR1YDR138W UGA4P32837 571 aa5.53□□□□□ -1.52
HPR1YDR138W RTT106P40161 455 aa5.53□□□□□ -1.52
HPR1YDR138W ISU1Q03020 165 aa5.53□□□□□ -1.52
HPR1YDR138W TOM20P35180 183 aa5.52□□□□□ -1.53
HPR1YDR138W YHR020WP38708 688 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms