RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W MYO4P32492 1471 aa4.47□□□□□ -1.69
VPS41YDR080W YDJ1P25491 409 aaKnown RBP4.47□□□□□ -1.69
VPS41YDR080W AFT1P22149 690 aa4.46□□□□□ -1.7
VPS41YDR080W TSC11P40061 1430 aa4.46□□□□□ -1.7
VPS41YDR080W ASH1P34233 588 aa4.46□□□□□ -1.7
VPS41YDR080W ULS1Q08562 1619 aa4.45□□□□□ -1.7
VPS41YDR080W STU1P38198 1513 aa4.44□□□□□ -1.7
VPS41YDR080W PDR12Q02785 1511 aa4.44□□□□□ -1.7
VPS41YDR080W SNQ2P32568 1501 aaKnown RBP4.44□□□□□ -1.7
VPS41YDR080W IXR1P33417 597 aa4.44□□□□□ -1.7
VPS41YDR080W EMW1P42842 904 aaKnown RBP4.44□□□□□ -1.7
VPS41YDR080W APL6P46682 809 aa4.44□□□□□ -1.7
VPS41YDR080W APP1P53933 587 aa4.44□□□□□ -1.7
VPS41YDR080W BRE2P43132 505 aa4.43□□□□□ -1.7
VPS41YDR080W SUP45P12385 437 aaKnown RBP4.43□□□□□ -1.7
VPS41YDR080W KIP2P28743 706 aa4.43□□□□□ -1.7
VPS41YDR080W MSB3P48566 633 aaPredicted RBP4.43□□□□□ -1.7
VPS41YDR080W CSE4P36012 229 aa4.42□□□□□ -1.7
VPS41YDR080W YBL086CP38177 466 aa4.42□□□□□ -1.7
VPS41YDR080W NAF1P53919 492 aaKnown RBP4.42□□□□□ -1.7
VPS41YDR080W TEC1P18412 486 aa4.42□□□□□ -1.7
VPS41YDR080W BUD3P25558 1636 aa4.42□□□□□ -1.7
VPS41YDR080W ISF1P32488 338 aa4.41□□□□□ -1.7
VPS41YDR080W YJR115WP47152 169 aa4.41□□□□□ -1.7
VPS41YDR080W FRA1Q07825 749 aa4.41□□□□□ -1.7
VPS41YDR080W BRL1P38770 471 aa4.41□□□□□ -1.7
VPS41YDR080W MLP2P40457 1679 aa4.41□□□□□ -1.7
VPS41YDR080W RDS2P19541 446 aaKnown RBP4.4□□□□□ -1.7
VPS41YDR080W YBL036CP38197 257 aa4.4□□□□□ -1.7
VPS41YDR080W DMA2P53924 522 aa4.4□□□□□ -1.7
VPS41YDR080W GDB1Q06625 1536 aa4.4□□□□□ -1.71
VPS41YDR080W CHC1P22137 1653 aaKnown RBP4.4□□□□□ -1.71
VPS41YDR080W ATG32P40458 529 aa4.4□□□□□ -1.71
VPS41YDR080W YNL108CP53929 270 aa4.4□□□□□ -1.71
VPS41YDR080W MCM16Q12262 181 aa4.4□□□□□ -1.71
VPS41YDR080W ENO2P00925 437 aaKnown RBP4.39□□□□□ -1.71
VPS41YDR080W MET22P32179 357 aa4.38□□□□□ -1.71
VPS41YDR080W BIM1P40013 344 aa4.38□□□□□ -1.71
VPS41YDR080W EMP47P43555 445 aa4.38□□□□□ -1.71
VPS41YDR080W DNF3Q12674 1656 aa4.38□□□□□ -1.71
VPS41YDR080W HAL5P38970 855 aaKnown RBP4.38□□□□□ -1.71
VPS41YDR080W YJL007CP47080 104 aa4.38□□□□□ -1.71
VPS41YDR080W RIM21P48565 533 aa4.38□□□□□ -1.71
VPS41YDR080W PTK2P47116 818 aaKnown RBP4.37□□□□□ -1.71
VPS41YDR080W IQG1Q12280 1495 aa4.37□□□□□ -1.71
VPS41YDR080W HST3P53687 447 aa4.37□□□□□ -1.71
VPS41YDR080W SPT5P27692 1063 aaKnown RBP4.36□□□□□ -1.71
VPS41YDR080W TIF1P10081 395 aaKnown RBP4.36□□□□□ -1.71
VPS41YDR080W MRX10Q05648 414 aa4.36□□□□□ -1.71
VPS41YDR080W GUT2P32191 649 aa4.35□□□□□ -1.71
VPS41YDR080W YDL176WQ12027 708 aa4.35□□□□□ -1.71
VPS41YDR080W PDR10P51533 1564 aa4.35□□□□□ -1.71
VPS41YDR080W PDR15Q04182 1529 aaKnown RBP4.35□□□□□ -1.71
VPS41YDR080W FBP26P32604 452 aa4.35□□□□□ -1.71
VPS41YDR080W UGA3P26370 528 aa4.35□□□□□ -1.71
VPS41YDR080W STE20Q03497 939 aaKnown RBP4.35□□□□□ -1.71
VPS41YDR080W ENV9Q08651 330 aa4.35□□□□□ -1.71
VPS41YDR080W STE6P12866 1290 aa4.34□□□□□ -1.71
VPS41YDR080W AAD14P42884 376 aa4.34□□□□□ -1.72
VPS41YDR080W LCB5Q06147 687 aaKnown RBP4.34□□□□□ -1.72
VPS41YDR080W ATG20Q07528 640 aa4.33□□□□□ -1.72
VPS41YDR080W ARO1P08566 1588 aaKnown RBP4.33□□□□□ -1.72
VPS41YDR080W GCR2Q01722 534 aa4.33□□□□□ -1.72
VPS41YDR080W ISU1Q03020 165 aa4.33□□□□□ -1.72
VPS41YDR080W DFG5Q05031 458 aa4.33□□□□□ -1.72
VPS41YDR080W OPT2Q06593 877 aa4.33□□□□□ -1.72
VPS41YDR080W STH1P32597 1359 aa4.33□□□□□ -1.72
VPS41YDR080W YDR444WQ04093 687 aa4.32□□□□□ -1.72
VPS41YDR080W ENO1P00924 437 aaKnown RBP4.32□□□□□ -1.72
VPS41YDR080W MKS1P34072 584 aa4.32□□□□□ -1.72
VPS41YDR080W MET10P39692 1035 aa4.32□□□□□ -1.72
VPS41YDR080W ISR1Q06098 443 aaKnown RBP4.32□□□□□ -1.72
VPS41YDR080W PEP12P32854 288 aa4.31□□□□□ -1.72
VPS41YDR080W DLD1P32891 587 aa4.31□□□□□ -1.72
VPS41YDR080W TY3B-GQ99315 1547 aa4.3□□□□□ -1.72
VPS41YDR080W NUP85P46673 744 aa4.3□□□□□ -1.72
VPS41YDR080W YJR098CP47139 656 aa4.3□□□□□ -1.72
VPS41YDR080W RTT106P40161 455 aa4.29□□□□□ -1.72
VPS41YDR080W MRX12P47084 519 aa4.29□□□□□ -1.72
VPS41YDR080W TY1A-BLQ12266 440 aa4.29□□□□□ -1.72
VPS41YDR080W RTG2P32608 588 aaKnown RBP4.29□□□□□ -1.72
VPS41YDR080W HAP1P0CE41 1502 aa4.29□□□□□ -1.72
VPS41YDR080W YTA7P40340 1379 aa4.29□□□□□ -1.72
VPS41YDR080W GBP2P25555 427 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
VPS41YDR080W SOH1P38633 127 aa4.29□□□□□ -1.72
VPS41YDR080W RGA1P39083 1007 aa4.29□□□□□ -1.72
VPS41YDR080W UTP13Q05946 817 aaKnown RBP4.28□□□□□ -1.72
VPS41YDR080W SPT2P06843 333 aaPredicted RBP4.27□□□□□ -1.73
VPS41YDR080W GAR1P28007 205 aaKnown RBP4.27□□□□□ -1.73
VPS41YDR080W ACO2P39533 789 aa4.27□□□□□ -1.73
VPS41YDR080W HDA3Q06623 655 aa4.27□□□□□ -1.73
VPS41YDR080W BDS1Q08347 646 aa4.27□□□□□ -1.73
VPS41YDR080W TY1A-DR3Q12441 440 aa4.27□□□□□ -1.73
VPS41YDR080W YPL062WQ02781 134 aa4.26□□□□□ -1.73
VPS41YDR080W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
VPS41YDR080W ARG82P07250 355 aa4.26□□□□□ -1.73
VPS41YDR080W SSN3P39073 555 aa4.26□□□□□ -1.73
VPS41YDR080W SLX8P40072 274 aa4.26□□□□□ -1.73
VPS41YDR080W YPP1P46951 817 aa4.26□□□□□ -1.73
VPS41YDR080W TCB1Q12466 1186 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 84.6 ms