RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C OPY1P38271 328 aa1.32□□□□□ -2.2
VAM6YDL077C SMC3P47037 1230 aa1.32□□□□□ -2.2
VAM6YDL077C VPS4P52917 437 aa1.32□□□□□ -2.2
VAM6YDL077C HUL5P53119 910 aa1.32□□□□□ -2.2
VAM6YDL077C TY1A-BLQ12266 440 aa1.32□□□□□ -2.2
VAM6YDL077C DPH6Q12429 685 aa1.32□□□□□ -2.2
VAM6YDL077C DNA2P38859 1522 aa1.32□□□□□ -2.2
VAM6YDL077C MHP1P43638 1398 aa1.32□□□□□ -2.2
VAM6YDL077C TOP1P04786 769 aa1.32□□□□□ -2.2
VAM6YDL077C AAD14P42884 376 aa1.32□□□□□ -2.2
VAM6YDL077C NIS1P53939 407 aa1.32□□□□□ -2.2
VAM6YDL077C RLP24Q07915 199 aaKnown RBP1.32□□□□□ -2.2
VAM6YDL077C NOP14Q99207 810 aaKnown RBP1.32□□□□□ -2.2
VAM6YDL077C TRM3Q07527 1436 aa1.32□□□□□ -2.2
VAM6YDL077C RAD9P14737 1309 aa1.31□□□□□ -2.2
VAM6YDL077C RPS0AP32905 252 aaKnown RBP1.31□□□□□ -2.2
VAM6YDL077C TCD1P38756 429 aa1.31□□□□□ -2.2
VAM6YDL077C RPN1P38764 993 aaKnown RBP1.31□□□□□ -2.2
VAM6YDL077C FUN12P39730 1002 aaKnown RBP1.31□□□□□ -2.2
VAM6YDL077C LYS5P50113 272 aa1.31□□□□□ -2.2
VAM6YDL077C FPK1P53739 893 aa1.31□□□□□ -2.2
VAM6YDL077C TCB1Q12466 1186 aa1.31□□□□□ -2.2
VAM6YDL077C TRM1P15565 570 aaKnown RBP1.31□□□□□ -2.2
VAM6YDL077C SPB4P25808 606 aaPredicted RBP1.31□□□□□ -2.2
VAM6YDL077C DLD1P32891 587 aa1.31□□□□□ -2.2
VAM6YDL077C NSG2P53898 299 aa1.31□□□□□ -2.2
VAM6YDL077C VPS72Q03388 795 aa1.31□□□□□ -2.2
VAM6YDL077C YVC1Q12324 675 aa1.31□□□□□ -2.2
VAM6YDL077C SCC2Q04002 1493 aa1.31□□□□□ -2.2
VAM6YDL077C TY3B-IQ7LHG5 1498 aaKnown RBP1.31□□□□□ -2.2
VAM6YDL077C PAN1P32521 1480 aa1.31□□□□□ -2.2
VAM6YDL077C YOR1P53049 1477 aa1.31□□□□□ -2.2
VAM6YDL077C ROX1P25042 368 aa1.31□□□□□ -2.2
VAM6YDL077C TOA1P32773 286 aa1.31□□□□□ -2.2
VAM6YDL077C BUB1P41695 1021 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
VAM6YDL077C YJR098CP47139 656 aa1.31□□□□□ -2.2
VAM6YDL077C YNL050CP53952 270 aa1.31□□□□□ -2.2
VAM6YDL077C LEO1P38439 464 aa1.3□□□□□ -2.2
VAM6YDL077C MSH4P40965 878 aaPredicted RBP1.3□□□□□ -2.2
VAM6YDL077C SEC27P41811 889 aaKnown RBP1.3□□□□□ -2.2
VAM6YDL077C ROG3P43602 733 aa1.3□□□□□ -2.2
VAM6YDL077C RRP15Q06511 250 aaPredicted RBP1.3□□□□□ -2.2
VAM6YDL077C MMP1Q12372 583 aa1.3□□□□□ -2.2
VAM6YDL077C REV3P14284 1504 aa1.3□□□□□ -2.2
VAM6YDL077C SBP1P10080 294 aaKnown RBP1.3□□□□□ -2.2
VAM6YDL077C SNF2P22082 1703 aa1.3□□□□□ -2.2
VAM6YDL077C NAP1P25293 417 aaKnown RBP1.3□□□□□ -2.2
VAM6YDL077C CBF5P33322 483 aaKnown RBP RIP-Chip data1.3□□□□□ -2.2not detected
VAM6YDL077C MKS1P34072 584 aa1.3□□□□□ -2.2
VAM6YDL077C YMR124WP39523 943 aaKnown RBP1.3□□□□□ -2.2
VAM6YDL077C KRI1P42846 591 aaKnown RBP1.3□□□□□ -2.2
VAM6YDL077C ATF2P53296 535 aa1.3□□□□□ -2.2
VAM6YDL077C GDB1Q06625 1536 aa1.3□□□□□ -2.2
VAM6YDL077C IQG1Q12280 1495 aa1.29□□□□□ -2.2
VAM6YDL077C MET5P47169 1442 aa1.29□□□□□ -2.2
VAM6YDL077C AI1P03875 834 aa1.29□□□□□ -2.2
VAM6YDL077C SPT2P06843 333 aaPredicted RBP1.29□□□□□ -2.2
VAM6YDL077C RNA1P11745 407 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C HSC82P15108 705 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C GLN1P32288 370 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C CDC11P32458 415 aa1.29□□□□□ -2.2
VAM6YDL077C DSF2P38213 736 aa1.29□□□□□ -2.2
VAM6YDL077C OSH7P38755 437 aa1.29□□□□□ -2.2
VAM6YDL077C CIN4P39110 191 aa1.29□□□□□ -2.2
VAM6YDL077C RIO2P40160 425 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C NRD1P53617 575 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
VAM6YDL077C TY1A-MR1Q04215 440 aa1.29□□□□□ -2.2
VAM6YDL077C FPR4Q06205 392 aaPredicted RBP1.29□□□□□ -2.2
VAM6YDL077C TAF2P23255 1407 aa1.29□□□□□ -2.2
VAM6YDL077C RPP2BP02400 110 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C EFB1P32471 206 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C VPS24P36095 224 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C YBL086CP38177 466 aa1.29□□□□□ -2.2
VAM6YDL077C PET100P38958 111 aa1.29□□□□□ -2.2
VAM6YDL077C HST2P53686 357 aa1.29□□□□□ -2.2
VAM6YDL077C APP1P53933 587 aa1.29□□□□□ -2.2
VAM6YDL077C SUB1P54000 292 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C CDC45Q08032 650 aa1.29□□□□□ -2.2
VAM6YDL077C NOP8Q08287 484 aaPredicted RBP1.29□□□□□ -2.2
VAM6YDL077C SNQ2P32568 1501 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C HIR3P47171 1648 aa1.29□□□□□ -2.2
VAM6YDL077C RRP5Q05022 1729 aaKnown RBP1.29□□□□□ -2.2
VAM6YDL077C SCJ1P25303 377 aa1.29□□□□□ -2.2
VAM6YDL077C VAC17P25591 423 aa1.29□□□□□ -2.2
VAM6YDL077C CEM1P39525 442 aa1.29□□□□□ -2.2
VAM6YDL077C DFG5Q05031 458 aa1.29□□□□□ -2.2
VAM6YDL077C BDS1Q08347 646 aa1.29□□□□□ -2.2
VAM6YDL077C THI72Q08579 599 aa1.29□□□□□ -2.2
VAM6YDL077C ATG2P53855 1592 aa1.28□□□□□ -2.2
VAM6YDL077C CAT8P39113 1433 aa1.28□□□□□ -2.2
VAM6YDL077C TAF13P11747 167 aa1.28□□□□□ -2.2
VAM6YDL077C KAR3P17119 729 aa1.28□□□□□ -2.2
VAM6YDL077C LTV1P34078 463 aa1.28□□□□□ -2.2
VAM6YDL077C JJJ3P47138 172 aa1.28□□□□□ -2.2
VAM6YDL077C YNL011CP53980 444 aa1.28□□□□□ -2.2
VAM6YDL077C VPS30Q02948 557 aa1.28□□□□□ -2.2
VAM6YDL077C PUF6Q04373 656 aaKnown RBP1.28□□□□□ -2.2
VAM6YDL077C RAV1P47104 1357 aa1.28□□□□□ -2.2
VAM6YDL077C RKR1Q04781 1562 aa1.28□□□□□ -2.2
VAM6YDL077C NUP157P40064 1391 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms