RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W CSE4P36012 229 aa7.12□□□□□ -1.27
RPT2YDL007W PAC1P39946 494 aaKnown RBP7.12□□□□□ -1.27
RPT2YDL007W YDL206WQ12424 762 aa7.12□□□□□ -1.27
RPT2YDL007W SMC4Q12267 1418 aa7.12□□□□□ -1.27
RPT2YDL007W MYO4P32492 1471 aa7.11□□□□□ -1.27
RPT2YDL007W TPD3P31383 635 aa7.11□□□□□ -1.27
RPT2YDL007W THI12P42883 340 aa7.11□□□□□ -1.27
RPT2YDL007W THI5P43534 340 aa7.11□□□□□ -1.27
RPT2YDL007W THI11P47183 340 aa7.11□□□□□ -1.27
RPT2YDL007W YMR074CQ04773 145 aa7.11□□□□□ -1.27
RPT2YDL007W YPR097WQ06839 1073 aa7.11□□□□□ -1.27
RPT2YDL007W THI13Q07748 340 aa7.11□□□□□ -1.27
RPT2YDL007W RTT106P40161 455 aa7.1□□□□□ -1.27
RPT2YDL007W MLP2P40457 1679 aa7.1□□□□□ -1.27
RPT2YDL007W TY3B-GQ99315 1547 aa7.1□□□□□ -1.27
RPT2YDL007W PKC1P24583 1151 aa7.09□□□□□ -1.27
RPT2YDL007W RSC30P38781 883 aa7.09□□□□□ -1.27
RPT2YDL007W HXT10P43581 546 aa7.09□□□□□ -1.27
RPT2YDL007W SEC3P33332 1336 aaKnown RBP7.07□□□□□ -1.28
RPT2YDL007W SDH2P21801 266 aa7.07□□□□□ -1.28
RPT2YDL007W YBL036CP38197 257 aa7.07□□□□□ -1.28
RPT2YDL007W PDR12Q02785 1511 aa7.07□□□□□ -1.28
RPT2YDL007W PDC1P06169 563 aaKnown RBP7.06□□□□□ -1.28
RPT2YDL007W MOD5P07884 428 aa7.06□□□□□ -1.28
RPT2YDL007W SPT5P27692 1063 aaKnown RBP7.06□□□□□ -1.28
RPT2YDL007W PRS1P32895 427 aaKnown RBP7.06□□□□□ -1.28
RPT2YDL007W YOR1P53049 1477 aa7.05□□□□□ -1.28
RPT2YDL007W BDP1P46678 594 aa7.05□□□□□ -1.28
RPT2YDL007W CHC1P22137 1653 aaKnown RBP7.05□□□□□ -1.28
RPT2YDL007W MAK16P10962 306 aaPredicted RBP7.04□□□□□ -1.28
RPT2YDL007W FRK1Q03002 865 aaPredicted RBP7.04□□□□□ -1.28
RPT2YDL007W SNQ2P32568 1501 aaKnown RBP7.04□□□□□ -1.28
RPT2YDL007W NAF1P53919 492 aaKnown RBP7.03□□□□□ -1.28
RPT2YDL007W URN1Q06525 465 aaKnown RBP7.03□□□□□ -1.28
RPT2YDL007W YJL007CP47080 104 aa7.02□□□□□ -1.28
RPT2YDL007W SYH1Q02875 849 aaKnown RBP7.02□□□□□ -1.28
RPT2YDL007W CST6P40535 587 aa7.01□□□□□ -1.29
RPT2YDL007W HED1Q03937 162 aa7.01□□□□□ -1.29
RPT2YDL007W KIP2P28743 706 aa7.01□□□□□ -1.29
RPT2YDL007W NUP157P40064 1391 aaKnown RBP7□□□□□ -1.29
RPT2YDL007W RAS1P01119 309 aa7□□□□□ -1.29
RPT2YDL007W BIM1P40013 344 aa7□□□□□ -1.29
RPT2YDL007W APP1P53933 587 aa7□□□□□ -1.29
RPT2YDL007W TY1B-NL2Q99337 1749 aaKnown RBP6.99□□□□□ -1.29
RPT2YDL007W YPP1P46951 817 aa6.99□□□□□ -1.29
RPT2YDL007W YSP2Q06681 1438 aa6.98□□□□□ -1.29
RPT2YDL007W TEC1P18412 486 aa6.97□□□□□ -1.29
RPT2YDL007W VAC17P25591 423 aa6.97□□□□□ -1.29
RPT2YDL007W IXR1P33417 597 aa6.97□□□□□ -1.29
RPT2YDL007W RPL34BP40525 121 aaKnown RBP6.97□□□□□ -1.29
RPT2YDL007W GEA1P47102 1408 aaPredicted RBP6.97□□□□□ -1.29
RPT2YDL007W ATG32P40458 529 aa6.96□□□□□ -1.3
RPT2YDL007W SRB8P25648 1427 aa6.96□□□□□ -1.3
RPT2YDL007W HAP1P0CE41 1502 aa6.95□□□□□ -1.3
RPT2YDL007W CDC4P07834 779 aa6.95□□□□□ -1.3
RPT2YDL007W GUT2P32191 649 aa6.95□□□□□ -1.3
RPT2YDL007W MRX12P47084 519 aa6.95□□□□□ -1.3
RPT2YDL007W PUS5Q06244 254 aa6.94□□□□□ -1.3
RPT2YDL007W TRK1P12685 1235 aa6.93□□□□□ -1.3
RPT2YDL007W CFT1Q06632 1357 aaKnown RBP6.92□□□□□ -1.3
RPT2YDL007W YLR419WQ06698 1435 aaKnown RBP6.92□□□□□ -1.3
RPT2YDL007W ATG3P40344 310 aa6.92□□□□□ -1.3
RPT2YDL007W FIG4P42837 879 aa6.92□□□□□ -1.3
RPT2YDL007W STE20Q03497 939 aaKnown RBP6.92□□□□□ -1.3
RPT2YDL007W HST3P53687 447 aa6.91□□□□□ -1.3
RPT2YDL007W BIO2P32451 375 aa6.9□□□□□ -1.3
RPT2YDL007W TIF1P10081 395 aaKnown RBP6.89□□□□□ -1.31
RPT2YDL007W IME2P32581 645 aa6.89□□□□□ -1.31
RPT2YDL007W GCR2Q01722 534 aa6.89□□□□□ -1.31
RPT2YDL007W SUB2Q07478 446 aaKnown RBP6.89□□□□□ -1.31
RPT2YDL007W FRA1Q07825 749 aa6.89□□□□□ -1.31
RPT2YDL007W SUP45P12385 437 aaKnown RBP6.88□□□□□ -1.31
RPT2YDL007W YNL108CP53929 270 aa6.88□□□□□ -1.31
RPT2YDL007W CLC1P17891 233 aa6.87□□□□□ -1.31
RPT2YDL007W AFT1P22149 690 aa6.87□□□□□ -1.31
RPT2YDL007W MRT4P33201 236 aaKnown RBP6.87□□□□□ -1.31
RPT2YDL007W ENV9Q08651 330 aa6.87□□□□□ -1.31
RPT2YDL007W MCM16Q12262 181 aa6.87□□□□□ -1.31
RPT2YDL007W RPP2BP02400 110 aaKnown RBP6.86□□□□□ -1.31
RPT2YDL007W UBP1P25037 809 aa6.86□□□□□ -1.31
RPT2YDL007W YDJ1P25491 409 aaKnown RBP6.86□□□□□ -1.31
RPT2YDL007W SIS2P36024 562 aa6.86□□□□□ -1.31
RPT2YDL007W YBT1P32386 1661 aa6.86□□□□□ -1.31
RPT2YDL007W UGA2P38067 497 aa6.85□□□□□ -1.31
RPT2YDL007W MSB3P48566 633 aaPredicted RBP6.85□□□□□ -1.31
RPT2YDL007W YPR084WQ06821 456 aa6.85□□□□□ -1.31
RPT2YDL007W UGA3P26370 528 aa6.84□□□□□ -1.31
RPT2YDL007W RTG2P32608 588 aaKnown RBP6.84□□□□□ -1.31
RPT2YDL007W AIR1P40507 360 aaKnown RBP6.84□□□□□ -1.31
RPT2YDL007W EMW1P42842 904 aaKnown RBP6.84□□□□□ -1.31
RPT2YDL007W EMP47P43555 445 aa6.84□□□□□ -1.31
RPT2YDL007W CLA4P48562 842 aa6.84□□□□□ -1.31
RPT2YDL007W YPR204WQ08995 1032 aa6.84□□□□□ -1.31
RPT2YDL007W ASH1P34233 588 aa6.83□□□□□ -1.32
RPT2YDL007W OPY1P38271 328 aa6.83□□□□□ -1.32
RPT2YDL007W UTP13Q05946 817 aaKnown RBP6.83□□□□□ -1.32
RPT2YDL007W MET32Q12041 191 aa6.83□□□□□ -1.32
RPT2YDL007W ENO2P00925 437 aaKnown RBP6.82□□□□□ -1.32
RPT2YDL007W YFR016CP43597 1233 aaKnown RBP6.82□□□□□ -1.32
RPT2YDL007W CPS1P27614 576 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms