RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	YPK9	Q12697	1472 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	HSL1	P34244	1518 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	CSN12	P47130	423 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	POL1	P13382	1468 aa		7.41	□□□□□ -1.22
RSA4	YCR072C	MYO4	P32492	1471 aa		7.41	□□□□□ -1.22
RSA4	YCR072C	FUN12	P39730	1002 aa	Known RBP	7.41	□□□□□ -1.22
RSA4	YCR072C	SPT6	P23615	1451 aa	Known RBP	7.4	□□□□□ -1.22
RSA4	YCR072C	KTR1	P27810	393 aa	Known RBP	7.4	□□□□□ -1.22
RSA4	YCR072C	PTK2	P47116	818 aa	Known RBP	7.4	□□□□□ -1.22
RSA4	YCR072C	HPC2	Q01448	625 aa		7.4	□□□□□ -1.22
RSA4	YCR072C	BPT1	P14772	1559 aa		7.4	□□□□□ -1.23
RSA4	YCR072C	SIN3	P22579	1536 aa		7.4	□□□□□ -1.23
RSA4	YCR072C	SPT2	P06843	333 aa	Predicted RBP	7.39	□□□□□ -1.23
RSA4	YCR072C	PKC1	P24583	1151 aa		7.39	□□□□□ -1.23
RSA4	YCR072C	MRT4	P33201	236 aa	Known RBP	7.39	□□□□□ -1.23
RSA4	YCR072C	SLD2	P34252	453 aa		7.39	□□□□□ -1.23
RSA4	YCR072C	REV3	P14284	1504 aa		7.39	□□□□□ -1.23
RSA4	YCR072C	NOT3	P06102	836 aa	Known RBP	7.38	□□□□□ -1.23
RSA4	YCR072C	VAC17	P25591	423 aa		7.38	□□□□□ -1.23
RSA4	YCR072C	NMD2	P38798	1089 aa	Known RBP	7.38	□□□□□ -1.23
RSA4	YCR072C	SMC3	P47037	1230 aa		7.38	□□□□□ -1.23
RSA4	YCR072C	EDE1	P34216	1381 aa		7.38	□□□□□ -1.23
RSA4	YCR072C	SSK2	P53599	1579 aa		7.38	□□□□□ -1.23
RSA4	YCR072C	TAF2	P23255	1407 aa		7.38	□□□□□ -1.23
RSA4	YCR072C	RSC30	P38781	883 aa		7.37	□□□□□ -1.23
RSA4	YCR072C	MHP1	P43638	1398 aa		7.37	□□□□□ -1.23
RSA4	YCR072C	TY1B-DR4	Q07793	1604 aa		7.36	□□□□□ -1.23
RSA4	YCR072C	HSP82	P02829	709 aa	Known RBP	7.36	□□□□□ -1.23
RSA4	YCR072C	RAD26	P40352	1085 aa		7.36	□□□□□ -1.23
RSA4	YCR072C	YJR008W	P47085	338 aa		7.36	□□□□□ -1.23
RSA4	YCR072C	RTS3	P53289	263 aa		7.36	□□□□□ -1.23
RSA4	YCR072C	SEN54	Q02825	467 aa	Predicted RBP	7.36	□□□□□ -1.23
RSA4	YCR072C	YLR346C	Q06139	101 aa		7.36	□□□□□ -1.23
RSA4	YCR072C	SWR1	Q05471	1514 aa		7.35	□□□□□ -1.23
RSA4	YCR072C	OCA5	P38738	679 aa		7.35	□□□□□ -1.23
RSA4	YCR072C	DJP1	P40564	432 aa		7.35	□□□□□ -1.23
RSA4	YCR072C	YPP1	P46951	817 aa		7.35	□□□□□ -1.23
RSA4	YCR072C	PLP2	Q12017	286 aa		7.35	□□□□□ -1.23
RSA4	YCR072C	DOS2	P54858	310 aa		7.34	□□□□□ -1.23
RSA4	YCR072C	HIR3	P47171	1648 aa		7.33	□□□□□ -1.24
RSA4	YCR072C	DNA2	P38859	1522 aa		7.33	□□□□□ -1.24
RSA4	YCR072C	PCT1	P13259	424 aa		7.33	□□□□□ -1.24
RSA4	YCR072C	BIM1	P40013	344 aa		7.33	□□□□□ -1.24
RSA4	YCR072C	RAD59	Q12223	238 aa		7.33	□□□□□ -1.24
RSA4	YCR072C	SSA2	P10592	639 aa	Known RBP	7.32	□□□□□ -1.24
RSA4	YCR072C	SSA4	P22202	642 aa	Known RBP	7.32	□□□□□ -1.24
RSA4	YCR072C	ATG32	P40458	529 aa		7.32	□□□□□ -1.24
RSA4	YCR072C	TSC11	P40061	1430 aa		7.32	□□□□□ -1.24
RSA4	YCR072C	VPS24	P36095	224 aa	Known RBP	7.32	□□□□□ -1.24
RSA4	YCR072C	SSF1	P38789	453 aa	Predicted RBP	7.32	□□□□□ -1.24
RSA4	YCR072C	APP1	P53933	587 aa		7.32	□□□□□ -1.24
RSA4	YCR072C	OPT2	Q06593	877 aa		7.32	□□□□□ -1.24
RSA4	YCR072C	MSP1	P28737	362 aa		7.31	□□□□□ -1.24
RSA4	YCR072C	YDL176W	Q12027	708 aa		7.31	□□□□□ -1.24
RSA4	YCR072C	PSH1	Q12161	406 aa		7.31	□□□□□ -1.24
RSA4	YCR072C	HEM3	P28789	327 aa		7.3	□□□□□ -1.24
RSA4	YCR072C	NUP85	P46673	744 aa		7.3	□□□□□ -1.24
RSA4	YCR072C	ARG82	P07250	355 aa		7.29	□□□□□ -1.24
RSA4	YCR072C	ARL1	P38116	183 aa	Known RBP	7.29	□□□□□ -1.24
RSA4	YCR072C	ALD4	P46367	519 aa	Known RBP	7.29	□□□□□ -1.24
RSA4	YCR072C	YJL007C	P47080	104 aa		7.29	□□□□□ -1.24
RSA4	YCR072C	CAF120	P53836	1060 aa		7.29	□□□□□ -1.24
RSA4	YCR072C	SUB1	P54000	292 aa	Known RBP	7.29	□□□□□ -1.24
RSA4	YCR072C	ITT1	Q04638	464 aa		7.29	□□□□□ -1.24
RSA4	YCR072C	YCF1	P39109	1515 aa	Known RBP	7.28	□□□□□ -1.24
RSA4	YCR072C	CPS1	P27614	576 aa		7.28	□□□□□ -1.24
RSA4	YCR072C	KNS1	P32350	737 aa	Predicted RBP	7.28	□□□□□ -1.24
RSA4	YCR072C	YBL086C	P38177	466 aa		7.28	□□□□□ -1.24
RSA4	YCR072C	MSH4	P40965	878 aa	Predicted RBP	7.28	□□□□□ -1.24
RSA4	YCR072C	VPS4	P52917	437 aa		7.28	□□□□□ -1.24
RSA4	YCR072C	TPO2	P53283	614 aa		7.28	□□□□□ -1.24
RSA4	YCR072C	PIL1	P53252	339 aa	Known RBP	7.27	□□□□□ -1.25
RSA4	YCR072C	MDG1	P53885	366 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	YNL011C	P53980	444 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	CDC45	Q08032	650 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	NUP159	P40477	1460 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	SNQ2	P32568	1501 aa	Known RBP	7.27	□□□□□ -1.25
RSA4	YCR072C	MIP1	P15801	1254 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	ASF1	P32447	279 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	CDC3	P32457	520 aa	Known RBP	7.27	□□□□□ -1.25
RSA4	YCR072C	FIG4	P42837	879 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	EMW1	P42842	904 aa	Known RBP	7.27	□□□□□ -1.25
RSA4	YCR072C	VPS72	Q03388	795 aa		7.27	□□□□□ -1.25
RSA4	YCR072C	ESP1	Q03018	1630 aa		7.26	□□□□□ -1.25
RSA4	YCR072C	TEC1	P18412	486 aa		7.26	□□□□□ -1.25
RSA4	YCR072C	CHZ1	P40019	153 aa	Predicted RBP	7.26	□□□□□ -1.25
RSA4	YCR072C	AAD14	P42884	376 aa		7.26	□□□□□ -1.25
RSA4	YCR072C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.26	□□□□□ -1.25	not detected
RSA4	YCR072C	NOB1	Q08444	459 aa	Known RBP	7.26	□□□□□ -1.25
RSA4	YCR072C	GIN4	Q12263	1142 aa		7.26	□□□□□ -1.25
RSA4	YCR072C	GEA1	P47102	1408 aa	Predicted RBP	7.26	□□□□□ -1.25
RSA4	YCR072C	RPP0	P05317	312 aa	Known RBP	7.25	□□□□□ -1.25
RSA4	YCR072C	GLY1	P37303	387 aa	Known RBP	7.25	□□□□□ -1.25
RSA4	YCR072C	SIC1	P38634	284 aa		7.25	□□□□□ -1.25
RSA4	YCR072C	DSN1	P40568	576 aa		7.25	□□□□□ -1.25
RSA4	YCR072C	SCW11	P53189	542 aa		7.25	□□□□□ -1.25
RSA4	YCR072C	PRP3	Q03338	469 aa	Predicted RBP	7.25	□□□□□ -1.25
RSA4	YCR072C	GCN2	P15442	1659 aa		7.24	□□□□□ -1.25
RSA4	YCR072C	VPS27	P40343	622 aa	Known RBP	7.24	□□□□□ -1.25
RSA4	YCR072C	LSC2	P53312	427 aa		7.24	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms