RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W SPB4P25808 606 aaPredicted RBP8.53□□□□□ -1.04
SWD1YAR003W IOC4Q04213 475 aa8.53□□□□□ -1.04
SWD1YAR003W RSF2P46974 1380 aa8.52□□□□□ -1.05
SWD1YAR003W XKS1P42826 600 aa8.52□□□□□ -1.05
SWD1YAR003W YRF1-2P40105 1681 aa8.52□□□□□ -1.05
SWD1YAR003W RAM1P22007 431 aa8.51□□□□□ -1.05
SWD1YAR003W RTR1P40084 226 aaPredicted RBP8.51□□□□□ -1.05
SWD1YAR003W IES2P40154 320 aa8.51□□□□□ -1.05
SWD1YAR003W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.5□□□□□ -1.05not detected
SWD1YAR003W PDR1P12383 1068 aa8.49□□□□□ -1.05
SWD1YAR003W YRR1Q12172 810 aa8.49□□□□□ -1.05
SWD1YAR003W MVP1P40959 511 aaKnown RBP8.48□□□□□ -1.05
SWD1YAR003W MEC3Q02574 474 aa8.48□□□□□ -1.05
SWD1YAR003W FKS3Q04952 1785 aa8.48□□□□□ -1.05
SWD1YAR003W SNF2P22082 1703 aa8.47□□□□□ -1.05
SWD1YAR003W RPP0P05317 312 aaKnown RBP8.47□□□□□ -1.05
SWD1YAR003W AKL1P38080 1108 aaKnown RBP8.47□□□□□ -1.05
SWD1YAR003W YDL144CQ07589 356 aa8.47□□□□□ -1.05
SWD1YAR003W TUM1Q08686 304 aaKnown RBP8.47□□□□□ -1.05
SWD1YAR003W YPR015CQ12531 247 aa8.47□□□□□ -1.05
SWD1YAR003W ROM2P51862 1356 aaKnown RBP8.47□□□□□ -1.05
SWD1YAR003W RGR1P19263 1082 aa8.46□□□□□ -1.06
SWD1YAR003W DSD1P53095 428 aa8.46□□□□□ -1.06
SWD1YAR003W SIR4P11978 1358 aa8.46□□□□□ -1.06
SWD1YAR003W HSP104P31539 908 aaKnown RBP8.45□□□□□ -1.06
SWD1YAR003W PSE1P32337 1089 aaKnown RBP8.45□□□□□ -1.06
SWD1YAR003W YKL133CP36066 463 aa8.45□□□□□ -1.06
SWD1YAR003W CTF4Q01454 927 aa8.45□□□□□ -1.06
SWD1YAR003W URB1P34241 1764 aaKnown RBP8.44□□□□□ -1.06
SWD1YAR003W VPS27P40343 622 aaKnown RBP8.44□□□□□ -1.06
SWD1YAR003W MPP10P47083 593 aaKnown RBP8.44□□□□□ -1.06
SWD1YAR003W RRP46P53256 223 aaPredicted RBP8.44□□□□□ -1.06
SWD1YAR003W APC1P53886 1748 aa8.43□□□□□ -1.06
SWD1YAR003W PRD1P25375 712 aa8.43□□□□□ -1.06
SWD1YAR003W AOS1Q06624 347 aa8.43□□□□□ -1.06
SWD1YAR003W CDC45Q08032 650 aa8.43□□□□□ -1.06
SWD1YAR003W YIL177CP40434 1758 aa8.43□□□□□ -1.06
SWD1YAR003W YJL225CP40889 1758 aa8.43□□□□□ -1.06
SWD1YAR003W YPR109WQ06104 294 aa8.42□□□□□ -1.06
SWD1YAR003W YRF1-4O13559 1382 aa8.42□□□□□ -1.06
SWD1YAR003W YJL181WP46987 611 aa8.41□□□□□ -1.06
SWD1YAR003W NUP42P49686 430 aaKnown RBP8.41□□□□□ -1.06
SWD1YAR003W ATG13Q06628 738 aa8.41□□□□□ -1.06
SWD1YAR003W LAM6Q08001 693 aa8.41□□□□□ -1.06
SWD1YAR003W NUD1P32336 851 aa8.4□□□□□ -1.06
SWD1YAR003W YMR074CQ04773 145 aa8.4□□□□□ -1.06
SWD1YAR003W PRS1P32895 427 aaKnown RBP8.39□□□□□ -1.07
SWD1YAR003W PRP40P33203 583 aaKnown RBP8.39□□□□□ -1.07
SWD1YAR003W GYP1Q08484 637 aa8.39□□□□□ -1.07
SWD1YAR003W UBP1P25037 809 aa8.38□□□□□ -1.07
SWD1YAR003W GLN1P32288 370 aaKnown RBP8.38□□□□□ -1.07
SWD1YAR003W NPL4P33755 580 aa8.38□□□□□ -1.07
SWD1YAR003W NTH2P35172 780 aa8.38□□□□□ -1.07
SWD1YAR003W DOT5P40553 215 aa8.38□□□□□ -1.07
SWD1YAR003W YRB30P53107 440 aaPredicted RBP8.38□□□□□ -1.07
SWD1YAR003W YNL050CP53952 270 aa8.38□□□□□ -1.07
SWD1YAR003W ADE16P54113 591 aaKnown RBP8.38□□□□□ -1.07
SWD1YAR003W FRK1Q03002 865 aaPredicted RBP8.38□□□□□ -1.07
SWD1YAR003W SAS4Q04003 481 aa8.38□□□□□ -1.07
SWD1YAR003W EDE1P34216 1381 aa8.37□□□□□ -1.07
SWD1YAR003W KCC4P25389 1037 aa8.37□□□□□ -1.07
SWD1YAR003W TPD3P31383 635 aa8.37□□□□□ -1.07
SWD1YAR003W MAM1P40065 302 aa8.37□□□□□ -1.07
SWD1YAR003W SAP155P43612 1002 aa8.37□□□□□ -1.07
SWD1YAR003W ZDS1P50111 915 aaKnown RBP8.37□□□□□ -1.07
SWD1YAR003W NSE3Q05541 303 aa8.37□□□□□ -1.07
SWD1YAR003W THI22Q06490 572 aa8.37□□□□□ -1.07
SWD1YAR003W INP54Q08227 384 aaKnown RBP8.37□□□□□ -1.07
SWD1YAR003W COBP00163 385 aa8.36□□□□□ -1.07
SWD1YAR003W UGA3P26370 528 aa8.36□□□□□ -1.07
SWD1YAR003W CLB5P30283 435 aa8.36□□□□□ -1.07
SWD1YAR003W STR2P47164 639 aa8.36□□□□□ -1.07
SWD1YAR003W FOX2Q02207 900 aaKnown RBP8.36□□□□□ -1.07
SWD1YAR003W DIT2P21595 489 aa8.35□□□□□ -1.07
SWD1YAR003W ISM1P48526 1002 aa8.35□□□□□ -1.07
SWD1YAR003W BUD20Q08004 166 aaPredicted RBP8.35□□□□□ -1.07
SWD1YAR003W NUP145P49687 1317 aa8.34□□□□□ -1.07
SWD1YAR003W SUI2P20459 304 aaKnown RBP8.34□□□□□ -1.07
SWD1YAR003W RPN11P43588 306 aaKnown RBP8.34□□□□□ -1.07
SWD1YAR003W YFR016CP43597 1233 aaKnown RBP8.34□□□□□ -1.07
SWD1YAR003W YBP2P53169 641 aa8.34□□□□□ -1.07
SWD1YAR003W RTT109Q07794 436 aa8.34□□□□□ -1.07
SWD1YAR003W RVB2Q12464 471 aaKnown RBP8.34□□□□□ -1.07
SWD1YAR003W PRT1P06103 763 aaKnown RBP8.33□□□□□ -1.08
SWD1YAR003W OSM1P21375 501 aaKnown RBP8.33□□□□□ -1.08
SWD1YAR003W GYP7P48365 746 aa8.33□□□□□ -1.08
SWD1YAR003W YRF1-3P0CX14 1859 aa8.32□□□□□ -1.08
SWD1YAR003W YRF1-7P0CX15 1859 aa8.32□□□□□ -1.08
SWD1YAR003W YRF1-6P53819 1859 aa8.32□□□□□ -1.08
SWD1YAR003W GRX1P25373 110 aaKnown RBP8.32□□□□□ -1.08
SWD1YAR003W RRT14P40470 206 aa8.32□□□□□ -1.08
SWD1YAR003W RMT2Q03305 412 aa8.32□□□□□ -1.08
SWD1YAR003W HEF3P53978 1044 aaKnown RBP8.31□□□□□ -1.08
SWD1YAR003W YKR075CP36155 307 aa8.3□□□□□ -1.08
SWD1YAR003W YBR287WP38355 427 aa8.3□□□□□ -1.08
SWD1YAR003W ALE1Q08548 619 aa8.3□□□□□ -1.08
SWD1YAR003W GCD11P32481 527 aaKnown RBP8.29□□□□□ -1.08
SWD1YAR003W TEA1P47988 759 aa8.29□□□□□ -1.08
SWD1YAR003W BMS1Q08965 1183 aaKnown RBP8.29□□□□□ -1.08
SWD1YAR003W LYS2P07702 1392 aa8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms