RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 ADGRL2O95490 1459 aa13.68□□□□□ -0.22
HNRNPU-224ENST00000640056 CCDC184Q52MB2 194 aa13.68□□□□□ -0.22
HNRNPU-224ENST00000640056 NCKAP5LQ9HCH0 1330 aa13.67□□□□□ -0.22
HNRNPU-224ENST00000640056 MROH1Q8NDA8 1641 aa13.67□□□□□ -0.22
HNRNPU-224ENST00000640056 ZBED9Q6R2W3 1325 aa13.67□□□□□ -0.22
HNRNPU-224ENST00000640056 MPHOSPH9Q99550 1183 aa13.66□□□□□ -0.22
HNRNPU-224ENST00000640056 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
HNRNPU-224ENST00000640056 ERVK-7P63135 1459 aa13.66□□□□□ -0.22
HNRNPU-224ENST00000640056 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
HNRNPU-224ENST00000640056 L3MBTL2Q969R5 705 aa13.65□□□□□ -0.22
HNRNPU-224ENST00000640056 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 C11orf95C9JLR9 678 aaPredicted RBP13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 TOM1O60784 492 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 MRS2Q9HD23 443 aa13.64□□□□□ -0.23
HNRNPU-224ENST00000640056 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
HNRNPU-224ENST00000640056 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
HNRNPU-224ENST00000640056 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
HNRNPU-224ENST00000640056 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.23
HNRNPU-224ENST00000640056 MED14O60244 1454 aa13.61□□□□□ -0.23
HNRNPU-224ENST00000640056 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
HNRNPU-224ENST00000640056 VWDEQ8N2E2 1590 aa13.6□□□□□ -0.23
HNRNPU-224ENST00000640056 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
HNRNPU-224ENST00000640056 ROCK1Q13464 1354 aa13.6□□□□□ -0.23
HNRNPU-224ENST00000640056 ZNF335Q9H4Z2 1342 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-224ENST00000640056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.59□□□□□ -0.238e-11■■□□□ 14
HNRNPU-224ENST00000640056 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
HNRNPU-224ENST00000640056 NPHP4O75161 1426 aaPredicted RBP13.58□□□□□ -0.24
HNRNPU-224ENST00000640056 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
HNRNPU-224ENST00000640056 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
HNRNPU-224ENST00000640056 CPS1P31327 1500 aa13.57□□□□□ -0.24
HNRNPU-224ENST00000640056 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
HNRNPU-224ENST00000640056 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
HNRNPU-224ENST00000640056 RPRD2Q5VT52 1461 aaKnown RBP13.56□□□□□ -0.24
HNRNPU-224ENST00000640056 CEP152O94986 1710 aa13.56□□□□□ -0.24
HNRNPU-224ENST00000640056 FOXD1Q16676 465 aa13.56□□□□□ -0.24
HNRNPU-224ENST00000640056 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
HNRNPU-224ENST00000640056 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-224ENST00000640056 SLC52A1Q9NWF4 448 aa13.55□□□□□ -0.24
HNRNPU-224ENST00000640056 SLIT1O75093 1534 aa13.54□□□□□ -0.24
HNRNPU-224ENST00000640056 NOS1P29475 1434 aa13.54□□□□□ -0.24
HNRNPU-224ENST00000640056 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
HNRNPU-224ENST00000640056 EFCAB6Q5THR3 1501 aa13.54□□□□□ -0.24
HNRNPU-224ENST00000640056 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
HNRNPU-224ENST00000640056 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
HNRNPU-224ENST00000640056 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
HNRNPU-224ENST00000640056 RNF123Q5XPI4 1314 aa13.52□□□□□ -0.24
HNRNPU-224ENST00000640056 KDM5AP29375 1690 aaKnown RBP13.52□□□□□ -0.25
HNRNPU-224ENST00000640056 TMEM2Q9UHN6 1383 aa13.52□□□□□ -0.25
HNRNPU-224ENST00000640056 DEKP35659 375 aaKnown RBP13.51□□□□□ -0.25
HNRNPU-224ENST00000640056 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
HNRNPU-224ENST00000640056 UBR1Q8IWV7 1749 aa13.51□□□□□ -0.25
HNRNPU-224ENST00000640056 NUDCQ9Y266 331 aa13.51□□□□□ -0.25
HNRNPU-224ENST00000640056 IDI1Q13907 227 aa13.5□□□□□ -0.25
HNRNPU-224ENST00000640056 TXNDC2Q86VQ3 553 aa13.5□□□□□ -0.25
HNRNPU-224ENST00000640056 UNC13BO14795 1591 aa13.49□□□□□ -0.25
HNRNPU-224ENST00000640056 IQGAP1P46940 1657 aa13.49□□□□□ -0.25
HNRNPU-224ENST00000640056 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
HNRNPU-224ENST00000640056 LTKP29376 864 aa13.47□□□□□ -0.25
HNRNPU-224ENST00000640056 TET3O43151 1660 aa13.47□□□□□ -0.25
HNRNPU-224ENST00000640056 HDGFP51858 240 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-224ENST00000640056 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
HNRNPU-224ENST00000640056 PIK3C2BO00750 1634 aa13.47□□□□□ -0.25
HNRNPU-224ENST00000640056 SYNMO15061 1565 aa13.47□□□□□ -0.25
HNRNPU-224ENST00000640056 ADGRB3O60242 1522 aa13.46□□□□□ -0.25
HNRNPU-224ENST00000640056 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.26
HNRNPU-224ENST00000640056 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-224ENST00000640056 NUP155O75694 1391 aa13.44□□□□□ -0.26
HNRNPU-224ENST00000640056 ANP32AP39687 249 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-224ENST00000640056 IQGAP3Q86VI3 1631 aa13.43□□□□□ -0.26
HNRNPU-224ENST00000640056 PNISRQ8TF01 805 aaKnown RBP13.42□□□□□ -0.26
HNRNPU-224ENST00000640056 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
HNRNPU-224ENST00000640056 SRCAPQ6ZRS2 3230 aa13.42□□□□□ -0.26
HNRNPU-224ENST00000640056 LRRC7Q96NW7 1537 aa13.42□□□□□ -0.26
HNRNPU-224ENST00000640056 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
HNRNPU-224ENST00000640056 USP47Q96K76 1375 aa13.41□□□□□ -0.26
HNRNPU-224ENST00000640056 NBR1Q14596 966 aa13.4□□□□□ -0.26
HNRNPU-224ENST00000640056 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
HNRNPU-224ENST00000640056 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
HNRNPU-224ENST00000640056 ROCK2O75116 1388 aaKnown RBP13.39□□□□□ -0.27
HNRNPU-224ENST00000640056 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
HNRNPU-224ENST00000640056 KCNA6P17658 529 aa13.39□□□□□ -0.27
HNRNPU-224ENST00000640056 TMC1Q8TDI8 760 aa13.39□□□□□ -0.27
HNRNPU-224ENST00000640056 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
HNRNPU-224ENST00000640056 RIMS2Q9UQ26 1411 aa13.38□□□□□ -0.27
HNRNPU-224ENST00000640056 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
HNRNPU-224ENST00000640056 E9PCH4 1651 aa13.36□□□□□ -0.27
HNRNPU-224ENST00000640056 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
HNRNPU-224ENST00000640056 TMEM131LA2VDJ0 1609 aa13.36□□□□□ -0.27
HNRNPU-224ENST00000640056 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
HNRNPU-224ENST00000640056 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
HNRNPU-224ENST00000640056 TBX22Q9Y458 520 aa13.35□□□□□ -0.27
HNRNPU-224ENST00000640056 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
HNRNPU-224ENST00000640056 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
HNRNPU-224ENST00000640056 RTL5Q5HYW3 569 aaPredicted RBP13.34□□□□□ -0.27
HNRNPU-224ENST00000640056 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
HNRNPU-224ENST00000640056 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms