RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 FOXD1Q16676 465 aa10.45□□□□□ -0.74
SNX25-207ENST00000618785 TXNDC2Q86VQ3 553 aa10.44□□□□□ -0.74
SNX25-207ENST00000618785 TMEM131LA2VDJ0 1609 aa10.43□□□□□ -0.74
SNX25-207ENST00000618785 SCAF11Q99590 1463 aaKnown RBP10.43□□□□□ -0.74
SNX25-207ENST00000618785 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
SNX25-207ENST00000618785 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNX25-207ENST00000618785 CLTCL1P53675 1640 aa10.42□□□□□ -0.74
SNX25-207ENST00000618785 MED14O60244 1454 aa10.42□□□□□ -0.74
SNX25-207ENST00000618785 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
SNX25-207ENST00000618785 POLR1AO95602 1720 aaPredicted RBP10.42□□□□□ -0.74
SNX25-207ENST00000618785 RIMS2Q9UQ26 1411 aa10.42□□□□□ -0.74
SNX25-207ENST00000618785 LTKP29376 864 aa10.41□□□□□ -0.74
SNX25-207ENST00000618785 PPP1R15AO75807 674 aaPredicted RBP10.41□□□□□ -0.74
SNX25-207ENST00000618785 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
SNX25-207ENST00000618785 NEURL4Q96JN8 1562 aa10.41□□□□□ -0.74
SNX25-207ENST00000618785 ZFYVE9O95405 1425 aa10.4□□□□□ -0.74
SNX25-207ENST00000618785 SCAF1Q9H7N4 1312 aaKnown RBP10.39□□□□□ -0.75
SNX25-207ENST00000618785 KIF1BO60333 1816 aa10.39□□□□□ -0.75
SNX25-207ENST00000618785 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
SNX25-207ENST00000618785 MYO5BQ9ULV0 1848 aa10.38□□□□□ -0.75
SNX25-207ENST00000618785 RPGRIP1LQ68CZ1 1315 aa10.38□□□□□ -0.75
SNX25-207ENST00000618785 IQGAP1P46940 1657 aa10.38□□□□□ -0.75
SNX25-207ENST00000618785 BCANQ96GW7 911 aa10.38□□□□□ -0.75
SNX25-207ENST00000618785 PLEKHG1Q9ULL1 1385 aa10.37□□□□□ -0.75
SNX25-207ENST00000618785 RGS17Q9UGC6 210 aaPredicted RBP10.37□□□□□ -0.75
SNX25-207ENST00000618785 CPS1P31327 1500 aa10.37□□□□□ -0.75
SNX25-207ENST00000618785 PCGF6Q9BYE7 350 aa10.36□□□□□ -0.75
SNX25-207ENST00000618785 ZNF335Q9H4Z2 1342 aaPredicted RBP10.36□□□□□ -0.75
SNX25-207ENST00000618785 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
SNX25-207ENST00000618785 SPATA31E1Q6ZUB1 1445 aa10.36□□□□□ -0.75
SNX25-207ENST00000618785 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
SNX25-207ENST00000618785 NUTM2DQ5VT03 806 aaPredicted RBP10.35□□□□□ -0.75
SNX25-207ENST00000618785 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
SNX25-207ENST00000618785 NEXMIFQ5QGS0 1516 aa10.34□□□□□ -0.75
SNX25-207ENST00000618785 DHX57Q6P158 1386 aaKnown RBP10.33□□□□□ -0.76
SNX25-207ENST00000618785 SLC26A8Q96RN1 970 aa10.33□□□□□ -0.76
SNX25-207ENST00000618785 TBX22Q9Y458 520 aa10.33□□□□□ -0.76
SNX25-207ENST00000618785 DIP2AQ14689 1571 aa10.31□□□□□ -0.76
SNX25-207ENST00000618785 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
SNX25-207ENST00000618785 SENP3Q9H4L4 574 aaPredicted RBP10.31□□□□□ -0.76
SNX25-207ENST00000618785 ADAMTS13Q76LX8 1427 aa10.31□□□□□ -0.76
SNX25-207ENST00000618785 SETBP1Q9Y6X0 1596 aa10.31□□□□□ -0.76
SNX25-207ENST00000618785 PIK3R4Q99570 1358 aa10.3□□□□□ -0.76
SNX25-207ENST00000618785 PPLO60437 1756 aa10.3□□□□□ -0.76
SNX25-207ENST00000618785 KCNA6P17658 529 aa10.3□□□□□ -0.76
SNX25-207ENST00000618785 STAC3Q96MF2 364 aa10.3□□□□□ -0.76
SNX25-207ENST00000618785 POTEAQ6S8J7 498 aa10.3□□□□□ -0.76
SNX25-207ENST00000618785 IFFO2Q5TF58 517 aa10.28□□□□□ -0.76
SNX25-207ENST00000618785 ADGRF5Q8IZF2 1346 aa10.28□□□□□ -0.76
SNX25-207ENST00000618785 MYOM2P54296 1465 aa10.28□□□□□ -0.76
SNX25-207ENST00000618785 IFT172Q9UG01 1749 aa10.28□□□□□ -0.76
SNX25-207ENST00000618785 NRXN3Q9Y4C0 1643 aa10.27□□□□□ -0.77
SNX25-207ENST00000618785 DCAF11Q8TEB1 546 aa10.27□□□□□ -0.77
SNX25-207ENST00000618785 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
SNX25-207ENST00000618785 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
SNX25-207ENST00000618785 NKTRP30414 1462 aaKnown RBP10.26□□□□□ -0.77
SNX25-207ENST00000618785 NEUROD1Q13562 356 aa10.26□□□□□ -0.77
SNX25-207ENST00000618785 KDM2AQ9Y2K7 1162 aa10.26□□□□□ -0.77
SNX25-207ENST00000618785 PIK3C2GO75747 1445 aa10.25□□□□□ -0.77
SNX25-207ENST00000618785 ALKQ9UM73 1620 aa10.25□□□□□ -0.77
SNX25-207ENST00000618785 PROSER2Q86WR7 435 aaPredicted RBP10.25□□□□□ -0.77
SNX25-207ENST00000618785 AMOTL2Q9Y2J4 779 aa10.25□□□□□ -0.77
SNX25-207ENST00000618785 METP08581 1390 aa10.25□□□□□ -0.77
SNX25-207ENST00000618785 NRXN1Q9ULB1 1477 aa10.25□□□□□ -0.77
SNX25-207ENST00000618785 LRRC7Q96NW7 1537 aa10.25□□□□□ -0.77
SNX25-207ENST00000618785 STRCP1A6NGW2 1772 aa10.24□□□□□ -0.77
SNX25-207ENST00000618785 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
SNX25-207ENST00000618785 PTPRUQ92729 1446 aa10.23□□□□□ -0.77
SNX25-207ENST00000618785 CLSPNQ9HAW4 1339 aa10.23□□□□□ -0.77
SNX25-207ENST00000618785 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
SNX25-207ENST00000618785 TMEM94Q12767 1356 aa10.23□□□□□ -0.77
SNX25-207ENST00000618785 L3MBTL2Q969R5 705 aa10.22□□□□□ -0.77
SNX25-207ENST00000618785 LAMC1P11047 1609 aa10.22□□□□□ -0.77
SNX25-207ENST00000618785 CFAP70Q5T0N1 1121 aa10.22□□□□□ -0.77
SNX25-207ENST00000618785 NCOA3Q9Y6Q9 1424 aa10.22□□□□□ -0.77
SNX25-207ENST00000618785 SETD1AO15047 1707 aaKnown RBP10.21□□□□□ -0.77
SNX25-207ENST00000618785 XRN1Q8IZH2 1706 aaKnown RBP10.21□□□□□ -0.77
SNX25-207ENST00000618785 TONSLQ96HA7 1378 aa10.21□□□□□ -0.77
SNX25-207ENST00000618785 LRPPRCP42704 1394 aaKnown RBP10.2□□□□□ -0.78
SNX25-207ENST00000618785 PRAG1Q86YV5 1406 aa10.2□□□□□ -0.78
SNX25-207ENST00000618785 CCER1Q8TC90 406 aaPredicted RBP10.2□□□□□ -0.78
SNX25-207ENST00000618785 C14orf37Q86TY3 774 aa10.2□□□□□ -0.78
SNX25-207ENST00000618785 PTCH1Q13635 1447 aa10.19□□□□□ -0.78
SNX25-207ENST00000618785 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
SNX25-207ENST00000618785 MSH6P52701 1360 aa10.19□□□□□ -0.78
SNX25-207ENST00000618785 ABCC11Q96J66 1382 aa10.19□□□□□ -0.78
SNX25-207ENST00000618785 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
SNX25-207ENST00000618785 STK26Q9P289 416 aa10.18□□□□□ -0.78
SNX25-207ENST00000618785 ASXL1Q8IXJ9 1541 aa10.18□□□□□ -0.78
SNX25-207ENST00000618785 YTHDC2Q9H6S0 1430 aaKnown RBP10.18□□□□□ -0.78
SNX25-207ENST00000618785 TECPR2O15040 1411 aa10.18□□□□□ -0.78
SNX25-207ENST00000618785 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
SNX25-207ENST00000618785 C19orf44Q9H6X5 657 aa10.17□□□□□ -0.78
SNX25-207ENST00000618785 ROBO2Q9HCK4 1378 aa10.17□□□□□ -0.78
SNX25-207ENST00000618785 XIRP1Q702N8 1843 aaKnown RBP10.16□□□□□ -0.78
SNX25-207ENST00000618785 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
SNX25-207ENST00000618785 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
SNX25-207ENST00000618785 CDK12Q9NYV4 1490 aaPredicted RBP10.16□□□□□ -0.78
SNX25-207ENST00000618785 ADGRB1O14514 1584 aa10.16□□□□□ -0.78
SNX25-207ENST00000618785 ATF3P18847 181 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms