RNA–Protein interactions for RNA: ENST00000618785.4

SNX25-207, Transcript of sorting nexin 25, humanhuman

TSL 5 BASIC

Gene SNX25, Length 3,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-207ENST00000618785 NISCHQ9Y2I1 1504 aa17.02■□□□□ 0.31
SNX25-207ENST00000618785 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
SNX25-207ENST00000618785 ABCC9O60706 1549 aa14.76□□□□□ -0.05
SNX25-207ENST00000618785 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
SNX25-207ENST00000618785 DNAJC5Q9H3Z4 198 aa14.38□□□□□ -0.11
SNX25-207ENST00000618785 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
SNX25-207ENST00000618785 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
SNX25-207ENST00000618785 NACADO15069 1562 aa14.19□□□□□ -0.14
SNX25-207ENST00000618785 RB1CC1Q8TDY2 1594 aa14.18□□□□□ -0.14
SNX25-207ENST00000618785 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
SNX25-207ENST00000618785 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
SNX25-207ENST00000618785 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
SNX25-207ENST00000618785 SCRIBQ14160 1630 aa13.76□□□□□ -0.21
SNX25-207ENST00000618785 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNX25-207ENST00000618785 BICRAQ9NZM4 1560 aa13.72□□□□□ -0.21
SNX25-207ENST00000618785 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
SNX25-207ENST00000618785 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
SNX25-207ENST00000618785 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
SNX25-207ENST00000618785 CUX2O14529 1486 aa13.36□□□□□ -0.27
SNX25-207ENST00000618785 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.27
SNX25-207ENST00000618785 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
SNX25-207ENST00000618785 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
SNX25-207ENST00000618785 TRIM41Q8WV44 630 aa13.17□□□□□ -0.3
SNX25-207ENST00000618785 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
SNX25-207ENST00000618785 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
SNX25-207ENST00000618785 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
SNX25-207ENST00000618785 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
SNX25-207ENST00000618785 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
SNX25-207ENST00000618785 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
SNX25-207ENST00000618785 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
SNX25-207ENST00000618785 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
SNX25-207ENST00000618785 WIZO95785 1651 aa12.95□□□□□ -0.34
SNX25-207ENST00000618785 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
SNX25-207ENST00000618785 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
SNX25-207ENST00000618785 AEBP2Q6ZN18 517 aaPredicted RBP12.81□□□□□ -0.36
SNX25-207ENST00000618785 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
SNX25-207ENST00000618785 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
SNX25-207ENST00000618785 CADPSQ9ULU8 1353 aa12.72□□□□□ -0.37
SNX25-207ENST00000618785 NESP48681 1621 aa12.72□□□□□ -0.37
SNX25-207ENST00000618785 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
SNX25-207ENST00000618785 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
SNX25-207ENST00000618785 CFTRP13569 1480 aa12.65□□□□□ -0.38
SNX25-207ENST00000618785 FANCD2Q9BXW9 1451 aa12.56□□□□□ -0.4
SNX25-207ENST00000618785 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
SNX25-207ENST00000618785 CEP164Q9UPV0 1460 aa12.55□□□□□ -0.4
SNX25-207ENST00000618785 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
SNX25-207ENST00000618785 PRDM2Q13029 1718 aa12.53□□□□□ -0.4
SNX25-207ENST00000618785 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
SNX25-207ENST00000618785 OSCARQ8IYS5 282 aa12.49□□□□□ -0.41
SNX25-207ENST00000618785 WDR62O43379 1518 aa12.45□□□□□ -0.42
SNX25-207ENST00000618785 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
SNX25-207ENST00000618785 ABCC8Q09428 1581 aa12.41□□□□□ -0.42
SNX25-207ENST00000618785 ILDR1Q86SU0 546 aaPredicted RBP12.37□□□□□ -0.43
SNX25-207ENST00000618785 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
SNX25-207ENST00000618785 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
SNX25-207ENST00000618785 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
SNX25-207ENST00000618785 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
SNX25-207ENST00000618785 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
SNX25-207ENST00000618785 TRHP20396 242 aaPredicted RBP12.34□□□□□ -0.43
SNX25-207ENST00000618785 CUX1P39880 1505 aa12.29□□□□□ -0.44
SNX25-207ENST00000618785 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
SNX25-207ENST00000618785 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
SNX25-207ENST00000618785 POLA1P09884 1462 aaPredicted RBP12.26□□□□□ -0.45
SNX25-207ENST00000618785 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
SNX25-207ENST00000618785 ARHGEF11O15085 1522 aa12.24□□□□□ -0.45
SNX25-207ENST00000618785 SOGA1O94964 1423 aa12.23□□□□□ -0.45
SNX25-207ENST00000618785 TOP2BQ02880 1626 aa12.21□□□□□ -0.45
SNX25-207ENST00000618785 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.46
SNX25-207ENST00000618785 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
SNX25-207ENST00000618785 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
SNX25-207ENST00000618785 SYNJ1O43426 1573 aa12.2□□□□□ -0.46
SNX25-207ENST00000618785 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
SNX25-207ENST00000618785 WDR97A6NE52 1622 aa12.15□□□□□ -0.46
SNX25-207ENST00000618785 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.47
SNX25-207ENST00000618785 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNX25-207ENST00000618785 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
SNX25-207ENST00000618785 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
SNX25-207ENST00000618785 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
SNX25-207ENST00000618785 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
SNX25-207ENST00000618785 GRIN2BQ13224 1484 aa12.08□□□□□ -0.48
SNX25-207ENST00000618785 ABCA5Q8WWZ7 1642 aa12.06□□□□□ -0.48
SNX25-207ENST00000618785 SNAPC4Q5SXM2 1469 aa12.04□□□□□ -0.48
SNX25-207ENST00000618785 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
SNX25-207ENST00000618785 ARAP1Q96P48 1450 aa12.03□□□□□ -0.48
SNX25-207ENST00000618785 PBRM1Q86U86 1689 aa12.02□□□□□ -0.48
SNX25-207ENST00000618785 KIF27Q86VH2 1401 aa12.02□□□□□ -0.49
SNX25-207ENST00000618785 FBLN2P98095 1184 aa12□□□□□ -0.49
SNX25-207ENST00000618785 ERICH3Q5RHP9 1530 aa12□□□□□ -0.49
SNX25-207ENST00000618785 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
SNX25-207ENST00000618785 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
SNX25-207ENST00000618785 CHD1O14646 1710 aa11.96□□□□□ -0.49
SNX25-207ENST00000618785 FHAD1B1AJZ9 1412 aa11.96□□□□□ -0.49
SNX25-207ENST00000618785 ADAMTS12P58397 1594 aa11.95□□□□□ -0.5
SNX25-207ENST00000618785 IGF1RP08069 1367 aa11.94□□□□□ -0.5
SNX25-207ENST00000618785 CHIC1Q5VXU3 224 aa11.93□□□□□ -0.5
SNX25-207ENST00000618785 GRIN2AQ12879 1464 aa11.91□□□□□ -0.5
SNX25-207ENST00000618785 CUL7Q14999 1698 aa11.9□□□□□ -0.5
SNX25-207ENST00000618785 CARMIL1Q5VZK9 1371 aa11.88□□□□□ -0.51
SNX25-207ENST00000618785 RUSC2Q8N2Y8 1516 aa11.88□□□□□ -0.51
SNX25-207ENST00000618785 NUP160Q12769 1436 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms