RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 LMTK2Q8IWU2 1503 aa8.01□□□□□ -1.13
GTDC1-220ENST00000618778 UGGT1Q9NYU2 1555 aa8□□□□□ -1.13
GTDC1-220ENST00000618778 TNRQ92752 1358 aa8□□□□□ -1.13
GTDC1-220ENST00000618778 A2ML1A8K2U0 1454 aa8□□□□□ -1.13
GTDC1-220ENST00000618778 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
GTDC1-220ENST00000618778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.99□□□□□ -1.13
GTDC1-220ENST00000618778 NAIPQ13075 1403 aa7.98□□□□□ -1.13
GTDC1-220ENST00000618778 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
GTDC1-220ENST00000618778 SPHKAPQ2M3C7 1700 aa7.97□□□□□ -1.13
GTDC1-220ENST00000618778 ARHGAP31Q2M1Z3 1444 aa7.96□□□□□ -1.13
GTDC1-220ENST00000618778 NCKAP5LQ9HCH0 1330 aa7.96□□□□□ -1.13
GTDC1-220ENST00000618778 STRCP1A6NGW2 1772 aa7.96□□□□□ -1.14
GTDC1-220ENST00000618778 PLA2R1Q13018 1463 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 NLRP1Q9C000 1473 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 HFM1A2PYH4 1435 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 NOS1P29475 1434 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 IQGAP1P46940 1657 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 ADGRB3O60242 1522 aa7.95□□□□□ -1.14
GTDC1-220ENST00000618778 KANK1Q14678 1352 aa7.94□□□□□ -1.14
GTDC1-220ENST00000618778 SPDYE1Q8NFV5 336 aaPredicted RBP7.94□□□□□ -1.14
GTDC1-220ENST00000618778 LTBP4Q8N2S1 1624 aa7.94□□□□□ -1.14
GTDC1-220ENST00000618778 FXR2P51116 673 aaKnown RBP eCLIP7.94□□□□□ -1.14
GTDC1-220ENST00000618778 TMEM131LA2VDJ0 1609 aa7.93□□□□□ -1.14
GTDC1-220ENST00000618778 CLTCL1P53675 1640 aa7.93□□□□□ -1.14
GTDC1-220ENST00000618778 NUP155O75694 1391 aa7.93□□□□□ -1.14
GTDC1-220ENST00000618778 KDM5AP29375 1690 aaKnown RBP7.92□□□□□ -1.14
GTDC1-220ENST00000618778 RPRD2Q5VT52 1461 aaKnown RBP7.92□□□□□ -1.14
GTDC1-220ENST00000618778 SLIT1O75093 1534 aa7.91□□□□□ -1.14
GTDC1-220ENST00000618778 ARHGAP23Q9P227 1491 aa7.91□□□□□ -1.14
GTDC1-220ENST00000618778 ZNF335Q9H4Z2 1342 aaPredicted RBP7.91□□□□□ -1.14
GTDC1-220ENST00000618778 PTPRTO14522 1441 aa7.91□□□□□ -1.14
GTDC1-220ENST00000618778 CLEC11AQ9Y240 323 aa7.9□□□□□ -1.14
GTDC1-220ENST00000618778 IDI1Q13907 227 aa7.9□□□□□ -1.15
GTDC1-220ENST00000618778 XIRP1Q702N8 1843 aaKnown RBP7.9□□□□□ -1.15
GTDC1-220ENST00000618778 SCAF11Q99590 1463 aaKnown RBP7.89□□□□□ -1.15
GTDC1-220ENST00000618778 TRPM2O94759 1503 aa7.89□□□□□ -1.15
GTDC1-220ENST00000618778 LTKP29376 864 aa7.89□□□□□ -1.15
GTDC1-220ENST00000618778 NPHP4O75161 1426 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-220ENST00000618778 MED14O60244 1454 aa7.88□□□□□ -1.15
GTDC1-220ENST00000618778 KIF1BO60333 1816 aa7.88□□□□□ -1.15
GTDC1-220ENST00000618778 SPDYE4A6NLX3 237 aa7.88□□□□□ -1.15
GTDC1-220ENST00000618778 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
GTDC1-220ENST00000618778 ZFYVE9O95405 1425 aa7.88□□□□□ -1.15
GTDC1-220ENST00000618778 NRXN3Q9Y4C0 1643 aa7.87□□□□□ -1.15
GTDC1-220ENST00000618778 TMEM2Q9UHN6 1383 aa7.87□□□□□ -1.15
GTDC1-220ENST00000618778 NUTM2DQ5VT03 806 aaPredicted RBP7.86□□□□□ -1.15
GTDC1-220ENST00000618778 PKD2Q13563 968 aa7.86□□□□□ -1.15
GTDC1-220ENST00000618778 ALKQ9UM73 1620 aa7.86□□□□□ -1.15
GTDC1-220ENST00000618778 RAB3GAP2Q9H2M9 1393 aa7.86□□□□□ -1.15
GTDC1-220ENST00000618778 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
GTDC1-220ENST00000618778 TRIM52Q96A61 297 aa7.85□□□□□ -1.15
GTDC1-220ENST00000618778 PPLO60437 1756 aa7.85□□□□□ -1.15
GTDC1-220ENST00000618778 THEMISQ8N1K5 641 aaPredicted RBP7.85□□□□□ -1.15
GTDC1-220ENST00000618778 IFT172Q9UG01 1749 aa7.85□□□□□ -1.15
GTDC1-220ENST00000618778 SETD5Q9C0A6 1442 aa7.85□□□□□ -1.15
GTDC1-220ENST00000618778 RIMS2Q9UQ26 1411 aa7.85□□□□□ -1.15
GTDC1-220ENST00000618778 SETD1AO15047 1707 aaKnown RBP7.84□□□□□ -1.15
GTDC1-220ENST00000618778 ANKLE2Q86XL3 938 aa7.84□□□□□ -1.15
GTDC1-220ENST00000618778 CERKQ8TCT0 537 aa7.84□□□□□ -1.15
GTDC1-220ENST00000618778 RTN4Q9NQC3 1192 aaKnown RBP7.84□□□□□ -1.15
GTDC1-220ENST00000618778 CHGAP10645 457 aaKnown RBP7.84□□□□□ -1.15
GTDC1-220ENST00000618778 CHD2O14647 1828 aaKnown RBP7.83□□□□□ -1.16
GTDC1-220ENST00000618778 TXNDC2Q86VQ3 553 aa7.83□□□□□ -1.16
GTDC1-220ENST00000618778 STAG3Q9UJ98 1225 aa7.83□□□□□ -1.16
GTDC1-220ENST00000618778 NWD1Q149M9 1564 aa7.83□□□□□ -1.16
GTDC1-220ENST00000618778 LRRC7Q96NW7 1537 aa7.82□□□□□ -1.16
GTDC1-220ENST00000618778 SLC26A8Q96RN1 970 aa7.81□□□□□ -1.16
GTDC1-220ENST00000618778 SLC52A1Q9NWF4 448 aa7.81□□□□□ -1.16
GTDC1-220ENST00000618778 ADAMTS13Q76LX8 1427 aa7.81□□□□□ -1.16
GTDC1-220ENST00000618778 PRR29P0C7W0 189 aa7.81□□□□□ -1.16
GTDC1-220ENST00000618778 PRKAR2AP13861 404 aaKnown RBP7.81□□□□□ -1.16
GTDC1-220ENST00000618778 CPS1P31327 1500 aa7.81□□□□□ -1.16
GTDC1-220ENST00000618778 RBM33Q96EV2 1170 aaKnown RBP7.8□□□□□ -1.16
GTDC1-220ENST00000618778 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
GTDC1-220ENST00000618778 XRN1Q8IZH2 1706 aaKnown RBP7.8□□□□□ -1.16
GTDC1-220ENST00000618778 PLEKHG1Q9ULL1 1385 aa7.8□□□□□ -1.16
GTDC1-220ENST00000618778 FBXO41Q8TF61 875 aa7.79□□□□□ -1.16
GTDC1-220ENST00000618778 MPHOSPH9Q99550 1183 aa7.79□□□□□ -1.16
GTDC1-220ENST00000618778 PTPRUQ92729 1446 aa7.79□□□□□ -1.16
GTDC1-220ENST00000618778 DIP2AQ14689 1571 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 SLC24A1O60721 1099 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 PLSCR2Q9NRY7 297 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 EID1Q9Y6B2 187 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 IQSEC2Q5JU85 1478 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 SPATA31E1Q6ZUB1 1445 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 ASXL1Q8IXJ9 1541 aa7.78□□□□□ -1.16
GTDC1-220ENST00000618778 DHX57Q6P158 1386 aaKnown RBP7.78□□□□□ -1.16
GTDC1-220ENST00000618778 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
GTDC1-220ENST00000618778 NALCNQ8IZF0 1738 aa7.77□□□□□ -1.17
GTDC1-220ENST00000618778 CCDC144AA2RUR9 1427 aa7.77□□□□□ -1.17
GTDC1-220ENST00000618778 ZNF326Q5BKZ1 582 aaKnown RBP7.77□□□□□ -1.17
GTDC1-220ENST00000618778 NKTRP30414 1462 aaKnown RBP7.76□□□□□ -1.17
GTDC1-220ENST00000618778 METP08581 1390 aa7.75□□□□□ -1.17
GTDC1-220ENST00000618778 CHADLQ6NUI6 762 aa7.75□□□□□ -1.17
GTDC1-220ENST00000618778 PROM2Q8N271 834 aa7.75□□□□□ -1.17
GTDC1-220ENST00000618778 BCANQ96GW7 911 aa7.75□□□□□ -1.17
GTDC1-220ENST00000618778 CLSPNQ9HAW4 1339 aa7.75□□□□□ -1.17
GTDC1-220ENST00000618778 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.75□□□□□ -1.17
GTDC1-220ENST00000618778 TMEM94Q12767 1356 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms