RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
GTDC1-220ENST00000618778 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
GTDC1-220ENST00000618778 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
GTDC1-220ENST00000618778 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
GTDC1-220ENST00000618778 PHF23Q9BUL5 403 aaPredicted RBP12.45□□□□□ -0.42
GTDC1-220ENST00000618778 FOXD1Q16676 465 aa11.7□□□□□ -0.54
GTDC1-220ENST00000618778 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
GTDC1-220ENST00000618778 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
GTDC1-220ENST00000618778 ABCC9O60706 1549 aa11.29□□□□□ -0.6
GTDC1-220ENST00000618778 PPP6R1Q9UPN7 881 aa11.07□□□□□ -0.64
GTDC1-220ENST00000618778 ADRA2BP18089 450 aa11.02□□□□□ -0.64
GTDC1-220ENST00000618778 POTEDQ86YR6 584 aa11.02□□□□□ -0.64
GTDC1-220ENST00000618778 PIAS4Q8N2W9 510 aaPredicted RBP10.95□□□□□ -0.66
GTDC1-220ENST00000618778 MSH5O43196 834 aa10.87□□□□□ -0.67
GTDC1-220ENST00000618778 RB1CC1Q8TDY2 1594 aa10.79□□□□□ -0.68
GTDC1-220ENST00000618778 ZCCHC6Q5VYS8 1495 aaKnown RBP10.76□□□□□ -0.69
GTDC1-220ENST00000618778 NACADO15069 1562 aa10.75□□□□□ -0.69
GTDC1-220ENST00000618778 DCAF8L2P0C7V8 631 aa10.73□□□□□ -0.69
GTDC1-220ENST00000618778 UNC13AQ9UPW8 1703 aa10.73□□□□□ -0.69
GTDC1-220ENST00000618778 MYO15BQ96JP2 1530 aa10.64□□□□□ -0.71
GTDC1-220ENST00000618778 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
GTDC1-220ENST00000618778 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
GTDC1-220ENST00000618778 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
GTDC1-220ENST00000618778 PABPN1Q86U42 306 aaKnown RBP eCLIP10.52□□□□□ -0.73
GTDC1-220ENST00000618778 DNAJC5BQ9UF47 199 aa10.39□□□□□ -0.75
GTDC1-220ENST00000618778 SHROOM4Q9ULL8 1493 aa10.28□□□□□ -0.76
GTDC1-220ENST00000618778 EIF4G1Q04637 1599 aaKnown RBP10.24□□□□□ -0.77
GTDC1-220ENST00000618778 CC2D2AQ9P2K1 1620 aa10.23□□□□□ -0.77
GTDC1-220ENST00000618778 CECR2Q9BXF3 1484 aa10.11□□□□□ -0.79
GTDC1-220ENST00000618778 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
GTDC1-220ENST00000618778 SCAF1Q9H7N4 1312 aaKnown RBP10.07□□□□□ -0.8
GTDC1-220ENST00000618778 SMARCA4P51532 1647 aa10.05□□□□□ -0.8
GTDC1-220ENST00000618778 PPP4R3CPQ6ZMV5 832 aa10□□□□□ -0.81
GTDC1-220ENST00000618778 DMRT2Q9Y5R5 561 aa9.99□□□□□ -0.81
GTDC1-220ENST00000618778 MROH2BQ7Z745 1585 aa9.98□□□□□ -0.81
GTDC1-220ENST00000618778 BAZ1AQ9NRL2 1556 aaPredicted RBP9.97□□□□□ -0.81
GTDC1-220ENST00000618778 ATAD2BQ9ULI0 1458 aa9.95□□□□□ -0.82
GTDC1-220ENST00000618778 WIZO95785 1651 aa9.92□□□□□ -0.82
GTDC1-220ENST00000618778 SMARCA2P51531 1590 aa9.91□□□□□ -0.82
GTDC1-220ENST00000618778 PEG3Q9GZU2 1588 aa9.91□□□□□ -0.82
GTDC1-220ENST00000618778 HMGXB3Q12766 1538 aa9.9□□□□□ -0.82
GTDC1-220ENST00000618778 NCAPD3P42695 1498 aa9.9□□□□□ -0.82
GTDC1-220ENST00000618778 BAZ1BQ9UIG0 1483 aaKnown RBP9.86□□□□□ -0.83
GTDC1-220ENST00000618778 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
GTDC1-220ENST00000618778 NESP48681 1621 aa9.81□□□□□ -0.84
GTDC1-220ENST00000618778 CNKSR2Q8WXI2 1034 aa9.77□□□□□ -0.85
GTDC1-220ENST00000618778 TOP2AP11388 1531 aaKnown RBP9.74□□□□□ -0.85
GTDC1-220ENST00000618778 KIF21AQ7Z4S6 1674 aa9.73□□□□□ -0.85
GTDC1-220ENST00000618778 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
GTDC1-220ENST00000618778 LAMC3Q9Y6N6 1575 aa9.68□□□□□ -0.86
GTDC1-220ENST00000618778 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
GTDC1-220ENST00000618778 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
GTDC1-220ENST00000618778 RNF216Q9NWF9 866 aaPredicted RBP9.65□□□□□ -0.86
GTDC1-220ENST00000618778 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
GTDC1-220ENST00000618778 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
GTDC1-220ENST00000618778 CCDC88BA6NC98 1476 aa9.61□□□□□ -0.87
GTDC1-220ENST00000618778 CADPSQ9ULU8 1353 aa9.61□□□□□ -0.87
GTDC1-220ENST00000618778 CFTRP13569 1480 aa9.58□□□□□ -0.88
GTDC1-220ENST00000618778 CUX2O14529 1486 aa9.56□□□□□ -0.88
GTDC1-220ENST00000618778 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
GTDC1-220ENST00000618778 FANCD2Q9BXW9 1451 aa9.55□□□□□ -0.88
GTDC1-220ENST00000618778 CEP164Q9UPV0 1460 aa9.53□□□□□ -0.88
GTDC1-220ENST00000618778 WDR62O43379 1518 aa9.53□□□□□ -0.88
GTDC1-220ENST00000618778 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
GTDC1-220ENST00000618778 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
GTDC1-220ENST00000618778 MRC2Q9UBG0 1479 aa9.52□□□□□ -0.88
GTDC1-220ENST00000618778 DCAF8L1A6NGE4 600 aa9.52□□□□□ -0.89
GTDC1-220ENST00000618778 URB2Q14146 1524 aaKnown RBP9.5□□□□□ -0.89
GTDC1-220ENST00000618778 KCNA4P22459 653 aa9.48□□□□□ -0.89
GTDC1-220ENST00000618778 TOPBP1Q92547 1522 aa9.42□□□□□ -0.9
GTDC1-220ENST00000618778 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.9
GTDC1-220ENST00000618778 CUX1P39880 1505 aa9.37□□□□□ -0.91
GTDC1-220ENST00000618778 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
GTDC1-220ENST00000618778 TARBP1Q13395 1621 aaKnown RBP9.35□□□□□ -0.91
GTDC1-220ENST00000618778 EIF4G3O43432 1585 aaKnown RBP9.34□□□□□ -0.91
GTDC1-220ENST00000618778 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
GTDC1-220ENST00000618778 POLA1P09884 1462 aaPredicted RBP9.34□□□□□ -0.91
GTDC1-220ENST00000618778 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
GTDC1-220ENST00000618778 WDR97A6NE52 1622 aa9.32□□□□□ -0.92
GTDC1-220ENST00000618778 FGD5Q6ZNL6 1462 aa9.31□□□□□ -0.92
GTDC1-220ENST00000618778 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
GTDC1-220ENST00000618778 RNF39Q9H2S5 420 aa9.31□□□□□ -0.92
GTDC1-220ENST00000618778 IFT140Q96RY7 1462 aa9.3□□□□□ -0.92
GTDC1-220ENST00000618778 BIVM-ERCC5R4GMW8 1640 aa9.28□□□□□ -0.92
GTDC1-220ENST00000618778 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.93
GTDC1-220ENST00000618778 CHD1O14646 1710 aa9.27□□□□□ -0.93
GTDC1-220ENST00000618778 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
GTDC1-220ENST00000618778 TOP2BQ02880 1626 aa9.26□□□□□ -0.93
GTDC1-220ENST00000618778 PBRM1Q86U86 1689 aa9.25□□□□□ -0.93
GTDC1-220ENST00000618778 SOGA1O94964 1423 aa9.23□□□□□ -0.93
GTDC1-220ENST00000618778 WRNQ14191 1432 aaPredicted RBP eCLIP9.23□□□□□ -0.93
GTDC1-220ENST00000618778 ABCA5Q8WWZ7 1642 aa9.23□□□□□ -0.93
GTDC1-220ENST00000618778 TDRD9Q8NDG6 1382 aaKnown RBP9.22□□□□□ -0.93
GTDC1-220ENST00000618778 CACNB1Q02641 598 aaPredicted RBP9.22□□□□□ -0.93
GTDC1-220ENST00000618778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.2□□□□□ -0.94
GTDC1-220ENST00000618778 SNAPC4Q5SXM2 1469 aa9.2□□□□□ -0.94
GTDC1-220ENST00000618778 ABCA10Q8WWZ4 1543 aa9.19□□□□□ -0.94
GTDC1-220ENST00000618778 C1QBPQ07021 282 aaKnown RBP9.17□□□□□ -0.94
GTDC1-220ENST00000618778 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.94
GTDC1-220ENST00000618778 ADAMTS12P58397 1594 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms