RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 FRAT1Q92837 279 aaPredicted RBP15.72■□□□□ 0.11
TP53-220ENST00000610623 IQGAP3Q86VI3 1631 aa15.72■□□□□ 0.11
TP53-220ENST00000610623 RGL2O15211 777 aa15.72■□□□□ 0.11
TP53-220ENST00000610623 ERBINQ96RT1 1412 aa15.71■□□□□ 0.11
TP53-220ENST00000610623 ABCA9Q8IUA7 1624 aa15.71■□□□□ 0.11
TP53-220ENST00000610623 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
TP53-220ENST00000610623 TMEM132AQ24JP5 1023 aa15.7■□□□□ 0.1
TP53-220ENST00000610623 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
TP53-220ENST00000610623 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
TP53-220ENST00000610623 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
TP53-220ENST00000610623 UHRF1BP1Q6BDS2 1440 aa15.69■□□□□ 0.1
TP53-220ENST00000610623 PDE3BQ13370 1112 aa15.67■□□□□ 0.1
TP53-220ENST00000610623 KLHL34Q8N239 644 aa15.67■□□□□ 0.1
TP53-220ENST00000610623 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
TP53-220ENST00000610623 ROCK2O75116 1388 aaKnown RBP15.67■□□□□ 0.1
TP53-220ENST00000610623 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
TP53-220ENST00000610623 SPOCK2Q92563 424 aa15.66■□□□□ 0.1
TP53-220ENST00000610623 BRD4O60885 1362 aaPredicted RBP15.65■□□□□ 0.1
TP53-220ENST00000610623 SPRYD3Q8NCJ5 442 aa15.65■□□□□ 0.1
TP53-220ENST00000610623 RALGAPBQ86X10 1494 aa15.64■□□□□ 0.09
TP53-220ENST00000610623 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
TP53-220ENST00000610623 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
TP53-220ENST00000610623 TRAPPC8Q9Y2L5 1435 aa15.63■□□□□ 0.09
TP53-220ENST00000610623 KDM5CP41229 1560 aa15.62■□□□□ 0.09
TP53-220ENST00000610623 INO80Q9ULG1 1556 aaPredicted RBP15.61■□□□□ 0.09
TP53-220ENST00000610623 FANCAO15360 1455 aa15.61■□□□□ 0.09
TP53-220ENST00000610623 ASXL2Q76L83 1435 aa15.61■□□□□ 0.09
TP53-220ENST00000610623 GLIPR1L2Q4G1C9 344 aa15.61■□□□□ 0.09
TP53-220ENST00000610623 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
TP53-220ENST00000610623 ATP10AO60312 1499 aa15.61■□□□□ 0.09
TP53-220ENST00000610623 CCDC144AA2RUR9 1427 aa15.6■□□□□ 0.09
TP53-220ENST00000610623 RALBP1Q15311 655 aa15.6■□□□□ 0.09
TP53-220ENST00000610623 SPAG9O60271 1321 aaKnown RBP15.59■□□□□ 0.09
TP53-220ENST00000610623 MYBBP1AQ9BQG0 1328 aaKnown RBP15.59■□□□□ 0.09
TP53-220ENST00000610623 CFAP74Q9C0B2 1584 aa15.59■□□□□ 0.09
TP53-220ENST00000610623 USP47Q96K76 1375 aa15.59■□□□□ 0.09
TP53-220ENST00000610623 PKNOX2Q96KN3 472 aa15.59■□□□□ 0.09
TP53-220ENST00000610623 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
TP53-220ENST00000610623 ATP7AQ04656 1500 aa15.58■□□□□ 0.09
TP53-220ENST00000610623 POLA2Q14181 598 aa15.58■□□□□ 0.08
TP53-220ENST00000610623 EIF2AK4Q9P2K8 1649 aaKnown RBP15.57■□□□□ 0.08
TP53-220ENST00000610623 CNGB1Q14028 1251 aaPredicted RBP15.56■□□□□ 0.08
TP53-220ENST00000610623 ADGRL1O94910 1474 aa15.56■□□□□ 0.08
TP53-220ENST00000610623 PLA2R1Q13018 1463 aa15.56■□□□□ 0.08
TP53-220ENST00000610623 TRHP20396 242 aaPredicted RBP15.55■□□□□ 0.08
TP53-220ENST00000610623 DCAF11Q8TEB1 546 aa15.55■□□□□ 0.08
TP53-220ENST00000610623 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
TP53-220ENST00000610623 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
TP53-220ENST00000610623 SLC4A3P48751 1232 aa15.55■□□□□ 0.08
TP53-220ENST00000610623 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
TP53-220ENST00000610623 FAM161AQ3B820 660 aa15.54■□□□□ 0.08
TP53-220ENST00000610623 C14orf37Q86TY3 774 aa15.54■□□□□ 0.08
TP53-220ENST00000610623 LAMC1P11047 1609 aa15.54■□□□□ 0.08
TP53-220ENST00000610623 POLR3GLQ9BT43 218 aa15.54■□□□□ 0.08
TP53-220ENST00000610623 DNAJC5Q9H3Z4 198 aa15.53■□□□□ 0.08
TP53-220ENST00000610623 TET3O43151 1660 aa15.53■□□□□ 0.08
TP53-220ENST00000610623 ZNF326Q5BKZ1 582 aaKnown RBP15.52■□□□□ 0.08
TP53-220ENST00000610623 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
TP53-220ENST00000610623 INSRP06213 1382 aa15.52■□□□□ 0.08
TP53-220ENST00000610623 E9PCH4 1651 aa15.52■□□□□ 0.08
TP53-220ENST00000610623 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.07
TP53-220ENST00000610623 KDM2BQ8NHM5 1336 aa15.52■□□□□ 0.07
TP53-220ENST00000610623 CENPQQ7L2Z9 268 aaPredicted RBP15.51■□□□□ 0.07
TP53-220ENST00000610623 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
TP53-220ENST00000610623 CRBNQ96SW2 442 aa15.51■□□□□ 0.07
TP53-220ENST00000610623 VWDEQ8N2E2 1590 aa15.51■□□□□ 0.07
TP53-220ENST00000610623 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
TP53-220ENST00000610623 AFAP1Q8N556 730 aa15.5■□□□□ 0.07
TP53-220ENST00000610623 TRPM2O94759 1503 aa15.5■□□□□ 0.07
TP53-220ENST00000610623 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
TP53-220ENST00000610623 A2MP01023 1474 aa15.5■□□□□ 0.07
TP53-220ENST00000610623 CHGAP10645 457 aaKnown RBP15.49■□□□□ 0.07
TP53-220ENST00000610623 C8orf34Q49A92 452 aa15.49■□□□□ 0.07
TP53-220ENST00000610623 L1TD1Q5T7N2 865 aaKnown RBP15.49■□□□□ 0.07
TP53-220ENST00000610623 NLRP13Q86W25 1043 aa15.49■□□□□ 0.07
TP53-220ENST00000610623 KANK1Q14678 1352 aa15.49■□□□□ 0.07
TP53-220ENST00000610623 CEP152O94986 1710 aa15.49■□□□□ 0.07
TP53-220ENST00000610623 ZNF518AQ6AHZ1 1483 aa15.49■□□□□ 0.07
TP53-220ENST00000610623 CARD11Q9BXL7 1154 aa15.49■□□□□ 0.07
TP53-220ENST00000610623 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
TP53-220ENST00000610623 KIDINS220Q9ULH0 1771 aa15.48■□□□□ 0.07
TP53-220ENST00000610623 PLIN1O60240 522 aa15.46■□□□□ 0.07
TP53-220ENST00000610623 SKAP1Q86WV1 359 aa15.46■□□□□ 0.07
TP53-220ENST00000610623 GPRASP1Q5JY77 1395 aa15.46■□□□□ 0.07
TP53-220ENST00000610623 PTPRTO14522 1441 aa15.46■□□□□ 0.06
TP53-220ENST00000610623 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
TP53-220ENST00000610623 CD109Q6YHK3 1445 aa15.45■□□□□ 0.06
TP53-220ENST00000610623 NEURL4Q96JN8 1562 aa15.45■□□□□ 0.06
TP53-220ENST00000610623 MROH1Q8NDA8 1641 aa15.45■□□□□ 0.06
TP53-220ENST00000610623 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
TP53-220ENST00000610623 PARD3Q8TEW0 1356 aa15.44■□□□□ 0.06
TP53-220ENST00000610623 RNF17Q9BXT8 1623 aaKnown RBP15.44■□□□□ 0.06
TP53-220ENST00000610623 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
TP53-220ENST00000610623 HECW2Q9P2P5 1572 aa15.42■□□□□ 0.06
TP53-220ENST00000610623 CLTCL1P53675 1640 aa15.42■□□□□ 0.06
TP53-220ENST00000610623 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
TP53-220ENST00000610623 NEO1Q92859 1461 aa15.42■□□□□ 0.06
TP53-220ENST00000610623 STAC3Q96MF2 364 aa15.42■□□□□ 0.06
TP53-220ENST00000610623 MLH3Q9UHC1 1453 aa15.41■□□□□ 0.06
TP53-220ENST00000610623 LMTK2Q8IWU2 1503 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms