RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 HSPA1LP34931 641 aa11.46□□□□□ -0.57
CNOT1-212ENST00000567285 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
CNOT1-212ENST00000567285 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.57
CNOT1-212ENST00000567285 POGZQ7Z3K3 1410 aa11.45□□□□□ -0.58
CNOT1-212ENST00000567285 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
CNOT1-212ENST00000567285 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
CNOT1-212ENST00000567285 ERBB3P21860 1342 aa11.44□□□□□ -0.58
CNOT1-212ENST00000567285 PDIA6Q15084 440 aa11.44□□□□□ -0.58
CNOT1-212ENST00000567285 VARS2Q5ST30 1063 aaKnown RBP11.44□□□□□ -0.58
CNOT1-212ENST00000567285 ZCCHC11Q5TAX3 1644 aaKnown RBP11.43□□□□□ -0.58
CNOT1-212ENST00000567285 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
CNOT1-212ENST00000567285 MED1Q15648 1581 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-212ENST00000567285 CEBPAP49715 358 aaPredicted RBP11.42□□□□□ -0.58
CNOT1-212ENST00000567285 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
CNOT1-212ENST00000567285 IQSEC2Q5JU85 1478 aa11.41□□□□□ -0.58
CNOT1-212ENST00000567285 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
CNOT1-212ENST00000567285 CFAP43Q8NDM7 1665 aa11.4□□□□□ -0.58
CNOT1-212ENST00000567285 PTPRTO14522 1441 aa11.4□□□□□ -0.58
CNOT1-212ENST00000567285 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
CNOT1-212ENST00000567285 DDX12PQ92771 950 aa11.38□□□□□ -0.59
CNOT1-212ENST00000567285 FOSBP53539 338 aa11.37□□□□□ -0.59
CNOT1-212ENST00000567285 LTBP4Q8N2S1 1624 aa11.36□□□□□ -0.59
CNOT1-212ENST00000567285 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
CNOT1-212ENST00000567285 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
CNOT1-212ENST00000567285 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
CNOT1-212ENST00000567285 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
CNOT1-212ENST00000567285 SEMA3EO15041 775 aa11.35□□□□□ -0.59
CNOT1-212ENST00000567285 MLLT3P42568 568 aaPredicted RBP11.35□□□□□ -0.59
CNOT1-212ENST00000567285 PCDHGA10Q9Y5H3 936 aa11.35□□□□□ -0.59
CNOT1-212ENST00000567285 FANCAO15360 1455 aa11.34□□□□□ -0.59
CNOT1-212ENST00000567285 IGF1RP08069 1367 aa11.34□□□□□ -0.59
CNOT1-212ENST00000567285 TOM1O60784 492 aa11.34□□□□□ -0.59
CNOT1-212ENST00000567285 PTGER2P43116 358 aa11.34□□□□□ -0.59
CNOT1-212ENST00000567285 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
CNOT1-212ENST00000567285 ZNF335Q9H4Z2 1342 aaPredicted RBP11.33□□□□□ -0.6
CNOT1-212ENST00000567285 GRXCR2A6NFK2 248 aa11.32□□□□□ -0.6
CNOT1-212ENST00000567285 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
CNOT1-212ENST00000567285 FAM9AQ8IZU1 332 aaPredicted RBP11.32□□□□□ -0.6
CNOT1-212ENST00000567285 PREX1Q8TCU6 1659 aa11.31□□□□□ -0.6
CNOT1-212ENST00000567285 CDAN1Q8IWY9 1227 aa11.31□□□□□ -0.6
CNOT1-212ENST00000567285 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
CNOT1-212ENST00000567285 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
CNOT1-212ENST00000567285 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
CNOT1-212ENST00000567285 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
CNOT1-212ENST00000567285 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
CNOT1-212ENST00000567285 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
CNOT1-212ENST00000567285 PHF14O94880 888 aa11.29□□□□□ -0.6
CNOT1-212ENST00000567285 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
CNOT1-212ENST00000567285 IQGAP2Q13576 1575 aa11.28□□□□□ -0.6
CNOT1-212ENST00000567285 NBR1Q14596 966 aa11.28□□□□□ -0.6
CNOT1-212ENST00000567285 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
CNOT1-212ENST00000567285 BIVM-ERCC5R4GMW8 1640 aa11.27□□□□□ -0.6
CNOT1-212ENST00000567285 NEO1Q92859 1461 aa11.27□□□□□ -0.6
CNOT1-212ENST00000567285 OSBPP22059 807 aa11.27□□□□□ -0.61
CNOT1-212ENST00000567285 TYW1BQ6NUM6 668 aa11.27□□□□□ -0.61
CNOT1-212ENST00000567285 KRTAP3-3Q9BYR6 98 aa11.27□□□□□ -0.61
CNOT1-212ENST00000567285 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
CNOT1-212ENST00000567285 ESF1Q9H501 851 aaKnown RBP11.27□□□□□ -0.61
CNOT1-212ENST00000567285 CARMIL1Q5VZK9 1371 aa11.27□□□□□ -0.61
CNOT1-212ENST00000567285 TESPA1A2RU30 521 aaPredicted RBP11.26□□□□□ -0.61
CNOT1-212ENST00000567285 RBM33Q96EV2 1170 aaKnown RBP11.26□□□□□ -0.61
CNOT1-212ENST00000567285 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-212ENST00000567285 DENND4BO75064 1496 aaPredicted RBP11.25□□□□□ -0.61
CNOT1-212ENST00000567285 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
CNOT1-212ENST00000567285 FER1L4A9Z1Z3 1794 aa11.24□□□□□ -0.61
CNOT1-212ENST00000567285 PSEN2P49810 448 aa11.24□□□□□ -0.61
CNOT1-212ENST00000567285 EPAS1Q99814 870 aa11.24□□□□□ -0.61
CNOT1-212ENST00000567285 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
CNOT1-212ENST00000567285 ARHGEF40Q8TER5 1519 aa11.24□□□□□ -0.61
CNOT1-212ENST00000567285 KIF27Q86VH2 1401 aa11.23□□□□□ -0.61
CNOT1-212ENST00000567285 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
CNOT1-212ENST00000567285 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
CNOT1-212ENST00000567285 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
CNOT1-212ENST00000567285 EN1Q05925 392 aaPredicted RBP11.21□□□□□ -0.61
CNOT1-212ENST00000567285 DMRTA1Q5VZB9 504 aa11.21□□□□□ -0.61
CNOT1-212ENST00000567285 FRMPD1Q5SYB0 1578 aa11.2□□□□□ -0.62
CNOT1-212ENST00000567285 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
CNOT1-212ENST00000567285 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
CNOT1-212ENST00000567285 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
CNOT1-212ENST00000567285 NCOA1Q15788 1441 aa11.19□□□□□ -0.62
CNOT1-212ENST00000567285 MAP3K7O43318 606 aa11.19□□□□□ -0.62
CNOT1-212ENST00000567285 COL9A1P20849 921 aa11.19□□□□□ -0.62
CNOT1-212ENST00000567285 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
CNOT1-212ENST00000567285 ZFYVE16Q7Z3T8 1539 aa11.19□□□□□ -0.62
CNOT1-212ENST00000567285 PBX2P40425 430 aa11.18□□□□□ -0.62
CNOT1-212ENST00000567285 CDHR5Q9HBB8 845 aa11.18□□□□□ -0.62
CNOT1-212ENST00000567285 PTPREP23469 700 aa11.17□□□□□ -0.62
CNOT1-212ENST00000567285 RBM26Q5T8P6 1007 aaKnown RBP11.17□□□□□ -0.62
CNOT1-212ENST00000567285 SETD1BQ9UPS6 1966 aaKnown RBP11.16□□□□□ -0.62
CNOT1-212ENST00000567285 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
CNOT1-212ENST00000567285 KIAA0556O60303 1618 aa11.16□□□□□ -0.62
CNOT1-212ENST00000567285 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
CNOT1-212ENST00000567285 EFCAB5A4FU69 1503 aa11.15□□□□□ -0.62
CNOT1-212ENST00000567285 LSM11P83369 360 aaKnown RBP eCLIP11.15□□□□□ -0.62
CNOT1-212ENST00000567285 ABCA9Q8IUA7 1624 aa11.15□□□□□ -0.62
CNOT1-212ENST00000567285 UGGT2Q9NYU1 1516 aa11.14□□□□□ -0.63
CNOT1-212ENST00000567285 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
CNOT1-212ENST00000567285 ANKRD13DQ6ZTN6 518 aa11.14□□□□□ -0.63
CNOT1-212ENST00000567285 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
CNOT1-212ENST00000567285 TRAPPC8Q9Y2L5 1435 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms