RNA–Protein interactions for RNA: ENST00000567285.1

CNOT1-212, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-212ENST00000567285 AEBP2Q6ZN18 517 aaPredicted RBP25.83■■□□□ 1.73
CNOT1-212ENST00000567285 CHIC1Q5VXU3 224 aa25.05■■□□□ 1.6
CNOT1-212ENST00000567285 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
CNOT1-212ENST00000567285 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
CNOT1-212ENST00000567285 FOXD1Q16676 465 aa20.32■□□□□ 0.84
CNOT1-212ENST00000567285 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
CNOT1-212ENST00000567285 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
CNOT1-212ENST00000567285 ADRA2BP18089 450 aa19.51■□□□□ 0.71
CNOT1-212ENST00000567285 PIAS4Q8N2W9 510 aaPredicted RBP19.1■□□□□ 0.65
CNOT1-212ENST00000567285 MSH5O43196 834 aa18.64■□□□□ 0.57
CNOT1-212ENST00000567285 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
CNOT1-212ENST00000567285 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
CNOT1-212ENST00000567285 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
CNOT1-212ENST00000567285 KCNA4P22459 653 aa17.46■□□□□ 0.39
CNOT1-212ENST00000567285 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
CNOT1-212ENST00000567285 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
CNOT1-212ENST00000567285 NCBP3Q53F19 620 aaKnown RBP17.31■□□□□ 0.36
CNOT1-212ENST00000567285 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
CNOT1-212ENST00000567285 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
CNOT1-212ENST00000567285 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
CNOT1-212ENST00000567285 HOXD11P31277 338 aaPredicted RBP17.02■□□□□ 0.32
CNOT1-212ENST00000567285 DCAF8L1A6NGE4 600 aa16.67■□□□□ 0.26
CNOT1-212ENST00000567285 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
CNOT1-212ENST00000567285 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
CNOT1-212ENST00000567285 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
CNOT1-212ENST00000567285 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
CNOT1-212ENST00000567285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■■□ 20.8
CNOT1-212ENST00000567285 ZBTB22O15209 634 aa16.12■□□□□ 0.17
CNOT1-212ENST00000567285 EHMT2Q96KQ7 1210 aa16.06■□□□□ 0.16
CNOT1-212ENST00000567285 RNF39Q9H2S5 420 aa16.04■□□□□ 0.16
CNOT1-212ENST00000567285 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
CNOT1-212ENST00000567285 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
CNOT1-212ENST00000567285 ABCC9O60706 1549 aa15.99■□□□□ 0.15
CNOT1-212ENST00000567285 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
CNOT1-212ENST00000567285 MYCNP04198 464 aaPredicted RBP15.8■□□□□ 0.12
CNOT1-212ENST00000567285 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
CNOT1-212ENST00000567285 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-212ENST00000567285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
CNOT1-212ENST00000567285 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
CNOT1-212ENST00000567285 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
CNOT1-212ENST00000567285 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
CNOT1-212ENST00000567285 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
CNOT1-212ENST00000567285 CAPN15O75808 1086 aa15.46■□□□□ 0.07
CNOT1-212ENST00000567285 APLP2Q06481 763 aa15.42■□□□□ 0.06
CNOT1-212ENST00000567285 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
CNOT1-212ENST00000567285 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
CNOT1-212ENST00000567285 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
CNOT1-212ENST00000567285 DSG3P32926 999 aa15.25■□□□□ 0.03
CNOT1-212ENST00000567285 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
CNOT1-212ENST00000567285 ABCB7O75027 752 aa15.23■□□□□ 0.03
CNOT1-212ENST00000567285 POLA2Q14181 598 aa15.14■□□□□ 0.01
CNOT1-212ENST00000567285 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
CNOT1-212ENST00000567285 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
CNOT1-212ENST00000567285 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
CNOT1-212ENST00000567285 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
CNOT1-212ENST00000567285 FBLN2P98095 1184 aa14.71□□□□□ -0.05
CNOT1-212ENST00000567285 RB1CC1Q8TDY2 1594 aa14.7□□□□□ -0.06
CNOT1-212ENST00000567285 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
CNOT1-212ENST00000567285 DCAF8L2P0C7V8 631 aa14.54□□□□□ -0.08
CNOT1-212ENST00000567285 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
CNOT1-212ENST00000567285 RBM42Q9BTD8 480 aaKnown RBP14.42□□□□□ -0.1
CNOT1-212ENST00000567285 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
CNOT1-212ENST00000567285 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
CNOT1-212ENST00000567285 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
CNOT1-212ENST00000567285 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
CNOT1-212ENST00000567285 ZNF692Q9BU19 519 aaPredicted RBP14.37□□□□□ -0.11
CNOT1-212ENST00000567285 NACADO15069 1562 aa14.35□□□□□ -0.11
CNOT1-212ENST00000567285 FKBP8Q14318 412 aa14.35□□□□□ -0.11
CNOT1-212ENST00000567285 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
CNOT1-212ENST00000567285 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
CNOT1-212ENST00000567285 CC2D2AQ9P2K1 1620 aa14.28□□□□□ -0.12
CNOT1-212ENST00000567285 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
CNOT1-212ENST00000567285 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
CNOT1-212ENST00000567285 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.14
CNOT1-212ENST00000567285 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
CNOT1-212ENST00000567285 PROM2Q8N271 834 aa14.15□□□□□ -0.14
CNOT1-212ENST00000567285 CUX2O14529 1486 aa14.06□□□□□ -0.16
CNOT1-212ENST00000567285 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
CNOT1-212ENST00000567285 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
CNOT1-212ENST00000567285 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
CNOT1-212ENST00000567285 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
CNOT1-212ENST00000567285 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
CNOT1-212ENST00000567285 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
CNOT1-212ENST00000567285 SHROOM4Q9ULL8 1493 aa13.91□□□□□ -0.18
CNOT1-212ENST00000567285 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
CNOT1-212ENST00000567285 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
CNOT1-212ENST00000567285 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.212e-8■■■■□ 23
CNOT1-212ENST00000567285 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
CNOT1-212ENST00000567285 MYO15BQ96JP2 1530 aa13.76□□□□□ -0.21
CNOT1-212ENST00000567285 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
CNOT1-212ENST00000567285 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
CNOT1-212ENST00000567285 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
CNOT1-212ENST00000567285 SCRIBQ14160 1630 aa13.68□□□□□ -0.22
CNOT1-212ENST00000567285 PRKAR2AP13861 404 aaKnown RBP13.67□□□□□ -0.22
CNOT1-212ENST00000567285 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
CNOT1-212ENST00000567285 MIER1Q8N108 512 aa13.63□□□□□ -0.23
CNOT1-212ENST00000567285 POTEHQ6S545 545 aa13.58□□□□□ -0.24
CNOT1-212ENST00000567285 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
CNOT1-212ENST00000567285 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
CNOT1-212ENST00000567285 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms