RNA–Protein interactions for RNA: ENST00000552931.1

SMARCC2-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-215ENST00000552931 PIAS4Q8N2W9 510 aaPredicted RBP9.29□□□□□ -0.92
SMARCC2-215ENST00000552931 EID1Q9Y6B2 187 aa9.29□□□□□ -0.92
SMARCC2-215ENST00000552931 PIK3C2BO00750 1634 aa9.29□□□□□ -0.92
SMARCC2-215ENST00000552931 IQGAP3Q86VI3 1631 aa9.29□□□□□ -0.92
SMARCC2-215ENST00000552931 ACIN1Q9UKV3 1341 aaKnown RBP9.29□□□□□ -0.92
SMARCC2-215ENST00000552931 PIP4K2BP78356 416 aa9.28□□□□□ -0.92
SMARCC2-215ENST00000552931 PLCB2Q00722 1185 aa9.28□□□□□ -0.92
SMARCC2-215ENST00000552931 TXNDC2Q86VQ3 553 aa9.28□□□□□ -0.92
SMARCC2-215ENST00000552931 GCC2Q8IWJ2 1684 aa9.28□□□□□ -0.92
SMARCC2-215ENST00000552931 ZFYVE9O95405 1425 aa9.28□□□□□ -0.92
SMARCC2-215ENST00000552931 NCOA3Q9Y6Q9 1424 aa9.28□□□□□ -0.92
SMARCC2-215ENST00000552931 ADGRB3O60242 1522 aa9.27□□□□□ -0.93
SMARCC2-215ENST00000552931 LRRC7Q96NW7 1537 aa9.27□□□□□ -0.93
SMARCC2-215ENST00000552931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.27□□□□□ -0.933e-6■■□□□ 14.3
SMARCC2-215ENST00000552931 CFAP65Q6ZU64 1925 aaKnown RBP9.27□□□□□ -0.93
SMARCC2-215ENST00000552931 BCANQ96GW7 911 aa9.26□□□□□ -0.93
SMARCC2-215ENST00000552931 PIK3R4Q99570 1358 aa9.25□□□□□ -0.93
SMARCC2-215ENST00000552931 PLEKHG1Q9ULL1 1385 aa9.25□□□□□ -0.93
SMARCC2-215ENST00000552931 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SMARCC2-215ENST00000552931 KCNA6P17658 529 aa9.25□□□□□ -0.93
SMARCC2-215ENST00000552931 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMARCC2-215ENST00000552931 TBX22Q9Y458 520 aa9.25□□□□□ -0.93
SMARCC2-215ENST00000552931 TMEM131LA2VDJ0 1609 aa9.24□□□□□ -0.93
SMARCC2-215ENST00000552931 HFM1A2PYH4 1435 aa9.24□□□□□ -0.93
SMARCC2-215ENST00000552931 NAIPQ13075 1403 aa9.24□□□□□ -0.93
SMARCC2-215ENST00000552931 TAOK2Q9UL54 1235 aa9.24□□□□□ -0.93
SMARCC2-215ENST00000552931 STRCP1A6NGW2 1772 aa9.24□□□□□ -0.93
SMARCC2-215ENST00000552931 NUP155O75694 1391 aa9.24□□□□□ -0.93
SMARCC2-215ENST00000552931 E9PCH4 1651 aa9.23□□□□□ -0.93
SMARCC2-215ENST00000552931 NKTRP30414 1462 aaKnown RBP9.23□□□□□ -0.93
SMARCC2-215ENST00000552931 NWD1Q149M9 1564 aa9.23□□□□□ -0.93
SMARCC2-215ENST00000552931 FAM135BQ49AJ0 1406 aa9.22□□□□□ -0.93
SMARCC2-215ENST00000552931 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
SMARCC2-215ENST00000552931 DIP2AQ14689 1571 aa9.21□□□□□ -0.93
SMARCC2-215ENST00000552931 RIMS2Q9UQ26 1411 aa9.21□□□□□ -0.94
SMARCC2-215ENST00000552931 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
SMARCC2-215ENST00000552931 ADAMTS13Q76LX8 1427 aa9.19□□□□□ -0.94
SMARCC2-215ENST00000552931 PRAG1Q86YV5 1406 aa9.19□□□□□ -0.94
SMARCC2-215ENST00000552931 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
SMARCC2-215ENST00000552931 XIRP1Q702N8 1843 aaKnown RBP9.18□□□□□ -0.94
SMARCC2-215ENST00000552931 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
SMARCC2-215ENST00000552931 TRPM2O94759 1503 aa9.17□□□□□ -0.94
SMARCC2-215ENST00000552931 RPGRIP1LQ68CZ1 1315 aa9.17□□□□□ -0.94
SMARCC2-215ENST00000552931 TMEM94Q12767 1356 aa9.16□□□□□ -0.94
SMARCC2-215ENST00000552931 HRCP23327 699 aa9.16□□□□□ -0.94
SMARCC2-215ENST00000552931 SPHKAPQ2M3C7 1700 aa9.16□□□□□ -0.94
SMARCC2-215ENST00000552931 DCCP43146 1447 aa9.15□□□□□ -0.94
SMARCC2-215ENST00000552931 SLC26A8Q96RN1 970 aa9.15□□□□□ -0.94
SMARCC2-215ENST00000552931 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.94
SMARCC2-215ENST00000552931 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.95
SMARCC2-215ENST00000552931 PROSER2Q86WR7 435 aaPredicted RBP9.13□□□□□ -0.95
SMARCC2-215ENST00000552931 C19orf44Q9H6X5 657 aa9.13□□□□□ -0.95
SMARCC2-215ENST00000552931 VGFO15240 615 aaPredicted RBP9.12□□□□□ -0.95
SMARCC2-215ENST00000552931 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
SMARCC2-215ENST00000552931 NRXN3Q9Y4C0 1643 aa9.12□□□□□ -0.95
SMARCC2-215ENST00000552931 MSH6P52701 1360 aa9.12□□□□□ -0.95
SMARCC2-215ENST00000552931 NEXMIFQ5QGS0 1516 aa9.11□□□□□ -0.95
SMARCC2-215ENST00000552931 PPP1R15AO75807 674 aaPredicted RBP9.11□□□□□ -0.95
SMARCC2-215ENST00000552931 CADPS2Q86UW7 1296 aa9.11□□□□□ -0.95
SMARCC2-215ENST00000552931 SLAIN2Q9P270 581 aa9.11□□□□□ -0.95
SMARCC2-215ENST00000552931 CLTCL1P53675 1640 aa9.1□□□□□ -0.95
SMARCC2-215ENST00000552931 ITGAEP38570 1179 aa9.1□□□□□ -0.95
SMARCC2-215ENST00000552931 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
SMARCC2-215ENST00000552931 PTPRUQ92729 1446 aa9.1□□□□□ -0.95
SMARCC2-215ENST00000552931 XRN1Q8IZH2 1706 aaKnown RBP9.1□□□□□ -0.95
SMARCC2-215ENST00000552931 PTCH1Q13635 1447 aa9.09□□□□□ -0.95
SMARCC2-215ENST00000552931 SPATA31E1Q6ZUB1 1445 aa9.09□□□□□ -0.95
SMARCC2-215ENST00000552931 POTEAQ6S8J7 498 aa9.09□□□□□ -0.95
SMARCC2-215ENST00000552931 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
SMARCC2-215ENST00000552931 AMOTL2Q9Y2J4 779 aa9.09□□□□□ -0.95
SMARCC2-215ENST00000552931 KIF1BO60333 1816 aa9.09□□□□□ -0.95
SMARCC2-215ENST00000552931 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
SMARCC2-215ENST00000552931 METP08581 1390 aa9.08□□□□□ -0.96
SMARCC2-215ENST00000552931 ANKRD30BQ9BXX2 1392 aa9.08□□□□□ -0.96
SMARCC2-215ENST00000552931 SIRT1Q96EB6 747 aa9.07□□□□□ -0.96
SMARCC2-215ENST00000552931 MPHOSPH9Q99550 1183 aa9.07□□□□□ -0.96
SMARCC2-215ENST00000552931 TECPR2O15040 1411 aa9.06□□□□□ -0.96
SMARCC2-215ENST00000552931 SETD5Q9C0A6 1442 aa9.06□□□□□ -0.96
SMARCC2-215ENST00000552931 AHDC1Q5TGY3 1603 aaPredicted RBP9.06□□□□□ -0.96
SMARCC2-215ENST00000552931 CHGAP10645 457 aaKnown RBP9.06□□□□□ -0.96
SMARCC2-215ENST00000552931 ROBO1Q9Y6N7 1651 aa9.06□□□□□ -0.96
SMARCC2-215ENST00000552931 SETD1AO15047 1707 aaKnown RBP9.05□□□□□ -0.96
SMARCC2-215ENST00000552931 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.05□□□□□ -0.96
SMARCC2-215ENST00000552931 LAMC1P11047 1609 aa9.05□□□□□ -0.96
SMARCC2-215ENST00000552931 CCDC144AA2RUR9 1427 aa9.05□□□□□ -0.96
SMARCC2-215ENST00000552931 ADGRL3Q9HAR2 1447 aa9.05□□□□□ -0.96
SMARCC2-215ENST00000552931 NRXN1Q9ULB1 1477 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 ABCC11Q96J66 1382 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 JCADQ9P266 1359 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 ATF3P18847 181 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 ZNF326Q5BKZ1 582 aaKnown RBP9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 PPLO60437 1756 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 SPATA31A6Q5VVP1 1343 aa9.04□□□□□ -0.96
SMARCC2-215ENST00000552931 ATXN8OSP0DMR3 200 aa9.03□□□□□ -0.96
SMARCC2-215ENST00000552931 MST1RQ04912 1400 aa9.03□□□□□ -0.96
SMARCC2-215ENST00000552931 COL16A1Q07092 1604 aaPredicted RBP9.02□□□□□ -0.96
SMARCC2-215ENST00000552931 BRINP3Q76B58 766 aa9.02□□□□□ -0.97
SMARCC2-215ENST00000552931 VSIG10Q8N0Z9 540 aa9.02□□□□□ -0.97
SMARCC2-215ENST00000552931 UPF1Q92900 1129 aaKnown RBP eCLIP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms