RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ERVK-7P63135 1459 aa19.89■□□□□ 0.77
CDCA3-207ENST00000538862 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
CDCA3-207ENST00000538862 A2ML1A8K2U0 1454 aa19.88■□□□□ 0.77
CDCA3-207ENST00000538862 RALGAPBQ86X10 1494 aa19.88■□□□□ 0.77
CDCA3-207ENST00000538862 FAM9BQ8IZU0 186 aa19.86■□□□□ 0.77
CDCA3-207ENST00000538862 LMTK2Q8IWU2 1503 aa19.85■□□□□ 0.77
CDCA3-207ENST00000538862 UNC13BO14795 1591 aa19.84■□□□□ 0.77
CDCA3-207ENST00000538862 ROCK2O75116 1388 aaKnown RBP19.84■□□□□ 0.77
CDCA3-207ENST00000538862 ARHGAP31Q2M1Z3 1444 aa19.84■□□□□ 0.77
CDCA3-207ENST00000538862 NCKAP5LQ9HCH0 1330 aa19.84■□□□□ 0.77
CDCA3-207ENST00000538862 EFCAB6Q5THR3 1501 aa19.82■□□□□ 0.76
CDCA3-207ENST00000538862 BCL11AQ9H165 835 aa19.82■□□□□ 0.76
CDCA3-207ENST00000538862 NLRP1Q9C000 1473 aa19.82■□□□□ 0.76
CDCA3-207ENST00000538862 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
CDCA3-207ENST00000538862 RBM19Q9Y4C8 960 aaKnown RBP19.82■□□□□ 0.76
CDCA3-207ENST00000538862 UGGT1Q9NYU2 1555 aa19.81■□□□□ 0.76
CDCA3-207ENST00000538862 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
CDCA3-207ENST00000538862 TET3O43151 1660 aa19.79■□□□□ 0.76
CDCA3-207ENST00000538862 DMRT2Q9Y5R5 561 aa19.78■□□□□ 0.76
CDCA3-207ENST00000538862 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
CDCA3-207ENST00000538862 CARD11Q9BXL7 1154 aa19.77■□□□□ 0.76
CDCA3-207ENST00000538862 SYNMO15061 1565 aa19.76■□□□□ 0.75
CDCA3-207ENST00000538862 IQGAP3Q86VI3 1631 aa19.76■□□□□ 0.75
CDCA3-207ENST00000538862 UBR1Q8IWV7 1749 aa19.76■□□□□ 0.75
CDCA3-207ENST00000538862 PTPRTO14522 1441 aa19.76■□□□□ 0.75
CDCA3-207ENST00000538862 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
CDCA3-207ENST00000538862 THEMISQ8N1K5 641 aaPredicted RBP19.75■□□□□ 0.75
CDCA3-207ENST00000538862 PIK3C2BO00750 1634 aa19.75■□□□□ 0.75
CDCA3-207ENST00000538862 IRX6P78412 446 aaPredicted RBP19.74■□□□□ 0.75
CDCA3-207ENST00000538862 E9PCH4 1651 aa19.74■□□□□ 0.75
CDCA3-207ENST00000538862 NOS1P29475 1434 aa19.73■□□□□ 0.75
CDCA3-207ENST00000538862 NEURL4Q96JN8 1562 aa19.72■□□□□ 0.75
CDCA3-207ENST00000538862 KTN1Q86UP2 1357 aaKnown RBP19.71■□□□□ 0.75
CDCA3-207ENST00000538862 IDI1Q13907 227 aa19.71■□□□□ 0.75
CDCA3-207ENST00000538862 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
CDCA3-207ENST00000538862 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.75
CDCA3-207ENST00000538862 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
CDCA3-207ENST00000538862 ANKLE2Q86XL3 938 aa19.7■□□□□ 0.74
CDCA3-207ENST00000538862 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
CDCA3-207ENST00000538862 KDM2AQ9Y2K7 1162 aa19.68■□□□□ 0.74
CDCA3-207ENST00000538862 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
CDCA3-207ENST00000538862 CCDC144AA2RUR9 1427 aa19.67■□□□□ 0.74
CDCA3-207ENST00000538862 ILDR1Q86SU0 546 aaPredicted RBP19.67■□□□□ 0.74
CDCA3-207ENST00000538862 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
CDCA3-207ENST00000538862 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
CDCA3-207ENST00000538862 MYO5BQ9ULV0 1848 aa19.66■□□□□ 0.74
CDCA3-207ENST00000538862 TRPM1Q7Z4N2 1603 aa19.66■□□□□ 0.74
CDCA3-207ENST00000538862 CERKQ8TCT0 537 aa19.65■□□□□ 0.74
CDCA3-207ENST00000538862 PRAG1Q86YV5 1406 aa19.65■□□□□ 0.74
CDCA3-207ENST00000538862 RALBP1Q15311 655 aa19.64■□□□□ 0.74
CDCA3-207ENST00000538862 LTKP29376 864 aa19.64■□□□□ 0.73
CDCA3-207ENST00000538862 TMC1Q8TDI8 760 aa19.64■□□□□ 0.73
CDCA3-207ENST00000538862 NUDCQ9Y266 331 aa19.64■□□□□ 0.73
CDCA3-207ENST00000538862 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
CDCA3-207ENST00000538862 NPHP4O75161 1426 aaPredicted RBP19.63■□□□□ 0.73
CDCA3-207ENST00000538862 SLC52A1Q9NWF4 448 aa19.63■□□□□ 0.73
CDCA3-207ENST00000538862 ADGRB3O60242 1522 aa19.63■□□□□ 0.73
CDCA3-207ENST00000538862 BRD4O60885 1362 aaPredicted RBP19.63■□□□□ 0.73
CDCA3-207ENST00000538862 IQGAP1P46940 1657 aa19.63■□□□□ 0.73
CDCA3-207ENST00000538862 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
CDCA3-207ENST00000538862 SLIT1O75093 1534 aa19.63■□□□□ 0.73
CDCA3-207ENST00000538862 TXNDC2Q86VQ3 553 aa19.62■□□□□ 0.73
CDCA3-207ENST00000538862 LAMC1P11047 1609 aa19.62■□□□□ 0.73
CDCA3-207ENST00000538862 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
CDCA3-207ENST00000538862 GPRASP1Q5JY77 1395 aa19.62■□□□□ 0.73
CDCA3-207ENST00000538862 MED14O60244 1454 aa19.61■□□□□ 0.73
CDCA3-207ENST00000538862 SCAF11Q99590 1463 aaKnown RBP19.61■□□□□ 0.73
CDCA3-207ENST00000538862 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
CDCA3-207ENST00000538862 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
CDCA3-207ENST00000538862 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
CDCA3-207ENST00000538862 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
CDCA3-207ENST00000538862 FANCIQ9NVI1 1328 aa19.6■□□□□ 0.73
CDCA3-207ENST00000538862 LRPPRCP42704 1394 aaKnown RBP19.6■□□□□ 0.73
CDCA3-207ENST00000538862 SPHKAPQ2M3C7 1700 aa19.6■□□□□ 0.73
CDCA3-207ENST00000538862 SENP3Q9H4L4 574 aaPredicted RBP19.59■□□□□ 0.73
CDCA3-207ENST00000538862 TMEM131LA2VDJ0 1609 aa19.58■□□□□ 0.73
CDCA3-207ENST00000538862 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
CDCA3-207ENST00000538862 CNGB1Q14028 1251 aaPredicted RBP19.57■□□□□ 0.72
CDCA3-207ENST00000538862 FBXO41Q8TF61 875 aa19.57■□□□□ 0.72
CDCA3-207ENST00000538862 B4GALNT3Q6L9W6 998 aa19.55■□□□□ 0.72
CDCA3-207ENST00000538862 NUTM2DQ5VT03 806 aaPredicted RBP19.53■□□□□ 0.72
CDCA3-207ENST00000538862 PARD3Q8TEW0 1356 aa19.53■□□□□ 0.72
CDCA3-207ENST00000538862 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.72
CDCA3-207ENST00000538862 CLTCL1P53675 1640 aa19.52■□□□□ 0.72
CDCA3-207ENST00000538862 RGL3Q3MIN7 710 aa19.52■□□□□ 0.72
CDCA3-207ENST00000538862 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
CDCA3-207ENST00000538862 NBPF1Q3BBV0 1214 aa19.51■□□□□ 0.71
CDCA3-207ENST00000538862 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
CDCA3-207ENST00000538862 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
CDCA3-207ENST00000538862 TRPM2O94759 1503 aa19.5■□□□□ 0.71
CDCA3-207ENST00000538862 PER1O15534 1290 aaPredicted RBP19.49■□□□□ 0.71
CDCA3-207ENST00000538862 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
CDCA3-207ENST00000538862 TESK2Q96S53 571 aa19.48■□□□□ 0.71
CDCA3-207ENST00000538862 MSH5O43196 834 aa19.47■□□□□ 0.71
CDCA3-207ENST00000538862 INSRP06213 1382 aa19.46■□□□□ 0.71
CDCA3-207ENST00000538862 KIF1BO60333 1816 aa19.45■□□□□ 0.7
CDCA3-207ENST00000538862 CPS1P31327 1500 aa19.45■□□□□ 0.7
CDCA3-207ENST00000538862 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
CDCA3-207ENST00000538862 TMF1P82094 1093 aa19.43■□□□□ 0.7
CDCA3-207ENST00000538862 DISP3Q9P2K9 1392 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms