RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
DENND3-221ENST00000523308 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
DENND3-221ENST00000523308 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
DENND3-221ENST00000523308 ARID3AQ99856 593 aa16.23■□□□□ 0.19
DENND3-221ENST00000523308 PDCL3Q9H2J4 239 aa16.23■□□□□ 0.19
DENND3-221ENST00000523308 SOX12O15370 315 aa16.23■□□□□ 0.19
DENND3-221ENST00000523308 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
DENND3-221ENST00000523308 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.19
DENND3-221ENST00000523308 ATP10BO94823 1461 aa16.22■□□□□ 0.19
DENND3-221ENST00000523308 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
DENND3-221ENST00000523308 KIF15Q9NS87 1388 aa16.21■□□□□ 0.19
DENND3-221ENST00000523308 OS9Q13438 667 aaPredicted RBP16.21■□□□□ 0.19
DENND3-221ENST00000523308 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
DENND3-221ENST00000523308 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
DENND3-221ENST00000523308 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
DENND3-221ENST00000523308 NBPF1Q3BBV0 1214 aa16.2■□□□□ 0.18
DENND3-221ENST00000523308 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
DENND3-221ENST00000523308 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
DENND3-221ENST00000523308 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
DENND3-221ENST00000523308 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
DENND3-221ENST00000523308 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
DENND3-221ENST00000523308 APPP05067 770 aa16.17■□□□□ 0.18
DENND3-221ENST00000523308 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
DENND3-221ENST00000523308 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
DENND3-221ENST00000523308 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
DENND3-221ENST00000523308 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
DENND3-221ENST00000523308 CROCC2H7BZ55 1655 aa16.15■□□□□ 0.18
DENND3-221ENST00000523308 KDM5CP41229 1560 aa16.15■□□□□ 0.18
DENND3-221ENST00000523308 PHF14O94880 888 aa16.15■□□□□ 0.18
DENND3-221ENST00000523308 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
DENND3-221ENST00000523308 NUP160Q12769 1436 aa16.14■□□□□ 0.17
DENND3-221ENST00000523308 ABCC10Q5T3U5 1492 aa16.14■□□□□ 0.17
DENND3-221ENST00000523308 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
DENND3-221ENST00000523308 PSEN1P49768 467 aa16.14■□□□□ 0.17
DENND3-221ENST00000523308 CC2D1BQ5T0F9 858 aaKnown RBP16.13■□□□□ 0.17
DENND3-221ENST00000523308 PTPRGP23470 1445 aa16.13■□□□□ 0.17
DENND3-221ENST00000523308 ADCY10Q96PN6 1610 aa16.11■□□□□ 0.17
DENND3-221ENST00000523308 ANAPC15P60006 121 aa16.1■□□□□ 0.17
DENND3-221ENST00000523308 DDRGK1Q96HY6 314 aa16.1■□□□□ 0.17
DENND3-221ENST00000523308 ABCA8O94911 1581 aa16.09■□□□□ 0.17
DENND3-221ENST00000523308 SETQ01105 290 aaPredicted RBP16.09■□□□□ 0.17
DENND3-221ENST00000523308 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
DENND3-221ENST00000523308 SMG6Q86US8 1419 aaKnown RBP16.09■□□□□ 0.17
DENND3-221ENST00000523308 GSE1Q14687 1217 aa16.09■□□□□ 0.17
DENND3-221ENST00000523308 AXDND1Q5T1B0 1012 aaPredicted RBP16.09■□□□□ 0.17
DENND3-221ENST00000523308 SMAP1Q8IYB5 467 aaPredicted RBP16.09■□□□□ 0.17
DENND3-221ENST00000523308 DNAJC2Q99543 621 aaKnown RBP16.08■□□□□ 0.17
DENND3-221ENST00000523308 PPP4R3BQ5MIZ7 849 aa16.07■□□□□ 0.16
DENND3-221ENST00000523308 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
DENND3-221ENST00000523308 ANP32BQ92688 251 aaKnown RBP16.07■□□□□ 0.16
DENND3-221ENST00000523308 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
DENND3-221ENST00000523308 GPATCH11Q8N954 259 aa16.06■□□□□ 0.16
DENND3-221ENST00000523308 CDCA7LQ96GN5 454 aa16.06■□□□□ 0.16
DENND3-221ENST00000523308 CCDC144AA2RUR9 1427 aa16.06■□□□□ 0.16
DENND3-221ENST00000523308 MYBBP1AQ9BQG0 1328 aaKnown RBP16.05■□□□□ 0.16
DENND3-221ENST00000523308 UHRF1BP1Q6BDS2 1440 aa16.05■□□□□ 0.16
DENND3-221ENST00000523308 FAM135AQ9P2D6 1515 aa16.04■□□□□ 0.16
DENND3-221ENST00000523308 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
DENND3-221ENST00000523308 SYCP2Q9BX26 1530 aa16.03■□□□□ 0.16
DENND3-221ENST00000523308 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
DENND3-221ENST00000523308 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
DENND3-221ENST00000523308 PLIN1O60240 522 aa16.02■□□□□ 0.16
DENND3-221ENST00000523308 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.16
DENND3-221ENST00000523308 E9PSI1 815 aa16.02■□□□□ 0.16
DENND3-221ENST00000523308 SHANK2Q9UPX8 1470 aa16.02■□□□□ 0.15
DENND3-221ENST00000523308 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.15
DENND3-221ENST00000523308 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
DENND3-221ENST00000523308 SKAP1Q86WV1 359 aa16.02■□□□□ 0.15
DENND3-221ENST00000523308 PANK3Q9H999 370 aa16.02■□□□□ 0.15
DENND3-221ENST00000523308 DISP3Q9P2K9 1392 aa16.01■□□□□ 0.15
DENND3-221ENST00000523308 PLEKHH2Q8IVE3 1493 aa16.01■□□□□ 0.15
DENND3-221ENST00000523308 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
DENND3-221ENST00000523308 RALBP1Q15311 655 aa16■□□□□ 0.15
DENND3-221ENST00000523308 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
DENND3-221ENST00000523308 PRAG1Q86YV5 1406 aa15.99■□□□□ 0.15
DENND3-221ENST00000523308 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
DENND3-221ENST00000523308 PLA2R1Q13018 1463 aa15.99■□□□□ 0.15
DENND3-221ENST00000523308 KTN1Q86UP2 1357 aaKnown RBP15.99■□□□□ 0.15
DENND3-221ENST00000523308 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
DENND3-221ENST00000523308 NLRP13Q86W25 1043 aa15.98■□□□□ 0.15
DENND3-221ENST00000523308 ARHGEF12Q9NZN5 1544 aa15.98■□□□□ 0.15
DENND3-221ENST00000523308 ERCC6L2Q5T890 1561 aa15.98■□□□□ 0.15
DENND3-221ENST00000523308 TTC37Q6PGP7 1564 aa15.98■□□□□ 0.15
DENND3-221ENST00000523308 RCAN3Q9UKA8 241 aa15.97■□□□□ 0.15
DENND3-221ENST00000523308 BRD4O60885 1362 aaPredicted RBP15.97■□□□□ 0.15
DENND3-221ENST00000523308 KDM5DQ9BY66 1539 aa15.97■□□□□ 0.15
DENND3-221ENST00000523308 PER1O15534 1290 aaPredicted RBP15.97■□□□□ 0.15
DENND3-221ENST00000523308 CDCA8Q53HL2 280 aa15.97■□□□□ 0.15
DENND3-221ENST00000523308 RRP1P56182 461 aaKnown RBP15.96■□□□□ 0.15
DENND3-221ENST00000523308 RNF123Q5XPI4 1314 aa15.96■□□□□ 0.15
DENND3-221ENST00000523308 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
DENND3-221ENST00000523308 TESK2Q96S53 571 aa15.96■□□□□ 0.15
DENND3-221ENST00000523308 A2MP01023 1474 aa15.96■□□□□ 0.15
DENND3-221ENST00000523308 DNTTIP2Q5QJE6 756 aaKnown RBP15.95■□□□□ 0.14
DENND3-221ENST00000523308 SH3BP1Q9Y3L3 701 aa15.95■□□□□ 0.14
DENND3-221ENST00000523308 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
DENND3-221ENST00000523308 AFAP1Q8N556 730 aa15.94■□□□□ 0.14
DENND3-221ENST00000523308 MAFGO15525 162 aa15.94■□□□□ 0.14
DENND3-221ENST00000523308 EGFL6Q8IUX8 553 aa15.93■□□□□ 0.14
DENND3-221ENST00000523308 NECTIN2Q92692 538 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms