RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 SCAPERQ9BY12 1400 aa7.53□□□□□ -1.2
PHC3-214ENST00000494943 E9PSI1 815 aa7.53□□□□□ -1.2
PHC3-214ENST00000494943 GABPB1Q06547 395 aaPredicted RBP7.53□□□□□ -1.2
PHC3-214ENST00000494943 DHX29Q7Z478 1369 aaKnown RBP7.52□□□□□ -1.2
PHC3-214ENST00000494943 USP47Q96K76 1375 aa7.52□□□□□ -1.2
PHC3-214ENST00000494943 BRD2P25440 801 aaKnown RBP7.52□□□□□ -1.21
PHC3-214ENST00000494943 CLASP1Q7Z460 1538 aa7.52□□□□□ -1.21
PHC3-214ENST00000494943 FAM184AQ8NB25 1140 aa7.52□□□□□ -1.21
PHC3-214ENST00000494943 PNISRQ8TF01 805 aaKnown RBP7.52□□□□□ -1.21
PHC3-214ENST00000494943 ARGLU1Q9NWB6 273 aaPredicted RBP7.52□□□□□ -1.21
PHC3-214ENST00000494943 FSD2A1L4K1 749 aa7.52□□□□□ -1.21
PHC3-214ENST00000494943 CLGNO14967 610 aa7.52□□□□□ -1.21
PHC3-214ENST00000494943 MPHOSPH9Q99550 1183 aa7.52□□□□□ -1.21
PHC3-214ENST00000494943 DCAF11Q8TEB1 546 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 L3MBTL2Q969R5 705 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 POLA1P09884 1462 aaPredicted RBP7.51□□□□□ -1.21
PHC3-214ENST00000494943 EFCAB5A4FU69 1503 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 ST18O60284 1047 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 DNAJC5Q9H3Z4 198 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 TMF1P82094 1093 aa7.51□□□□□ -1.21
PHC3-214ENST00000494943 DHX8Q14562 1220 aaKnown RBP7.51□□□□□ -1.21
PHC3-214ENST00000494943 VGFO15240 615 aaPredicted RBP7.5□□□□□ -1.21
PHC3-214ENST00000494943 RRP7BPQ9NSQ0 103 aa7.5□□□□□ -1.21
PHC3-214ENST00000494943 TSPY26PQ9H489 355 aa7.5□□□□□ -1.21
PHC3-214ENST00000494943 CWC22Q9HCG8 908 aaKnown RBP7.5□□□□□ -1.21
PHC3-214ENST00000494943 TPM4P67936 248 aa7.5□□□□□ -1.21
PHC3-214ENST00000494943 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
PHC3-214ENST00000494943 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
PHC3-214ENST00000494943 SHROOM2Q13796 1616 aa7.49□□□□□ -1.21
PHC3-214ENST00000494943 CLUAP1Q96AJ1 413 aa7.49□□□□□ -1.21
PHC3-214ENST00000494943 PRDM10Q9NQV6 1147 aa7.49□□□□□ -1.21
PHC3-214ENST00000494943 ZNF500O60304 480 aaPredicted RBP7.49□□□□□ -1.21
PHC3-214ENST00000494943 OGFRQ9NZT2 677 aa7.49□□□□□ -1.21
PHC3-214ENST00000494943 IPO8O15397 1037 aaKnown RBP7.49□□□□□ -1.21
PHC3-214ENST00000494943 NOL7Q9UMY1 257 aaKnown RBP7.49□□□□□ -1.21
PHC3-214ENST00000494943 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
PHC3-214ENST00000494943 ABCA10Q8WWZ4 1543 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 PTPN23Q9H3S7 1636 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 PPP1R9BQ96SB3 815 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 USP8P40818 1118 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 AK7Q96M32 723 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 MYOM3Q5VTT5 1437 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 CASKIN1Q8WXD9 1431 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 ZMYM4Q5VZL5 1548 aa7.48□□□□□ -1.21
PHC3-214ENST00000494943 ZNF608Q9ULD9 1512 aaPredicted RBP7.48□□□□□ -1.21
PHC3-214ENST00000494943 CBX1P83916 185 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 AQRO60306 1485 aaKnown RBP eCLIP7.47□□□□□ -1.211e-6■■■■□ 21.2
PHC3-214ENST00000494943 KLHL40Q2TBA0 621 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 CHIC2Q9UKJ5 165 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 ATP6V1DQ9Y5K8 247 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 PLIN1O60240 522 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 EHBP1L1Q8N3D4 1523 aa7.47□□□□□ -1.21
PHC3-214ENST00000494943 DEF6Q9H4E7 631 aa7.46□□□□□ -1.21
PHC3-214ENST00000494943 NCBP3Q53F19 620 aaKnown RBP7.46□□□□□ -1.21
PHC3-214ENST00000494943 MYRIPQ8NFW9 859 aa7.46□□□□□ -1.21
PHC3-214ENST00000494943 CARMIL1Q5VZK9 1371 aa7.46□□□□□ -1.22
PHC3-214ENST00000494943 ZRSR1Q15695 479 aaKnown RBP7.46□□□□□ -1.22
PHC3-214ENST00000494943 CC2D1BQ5T0F9 858 aaKnown RBP7.46□□□□□ -1.22
PHC3-214ENST00000494943 P3H3Q8IVL6 736 aa7.46□□□□□ -1.22
PHC3-214ENST00000494943 IBTKQ9P2D0 1353 aaPredicted RBP7.46□□□□□ -1.22
PHC3-214ENST00000494943 PLCB2Q00722 1185 aa7.46□□□□□ -1.22
PHC3-214ENST00000494943 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.223e-7■□□□□ 10.8
PHC3-214ENST00000494943 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
PHC3-214ENST00000494943 TXLNBQ8N3L3 684 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 TBC1D2Q9BYX2 928 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 LRRIQ1Q96JM4 1722 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 KIF2AO00139 706 aaPredicted RBP7.45□□□□□ -1.22
PHC3-214ENST00000494943 KCNJ4P48050 445 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
PHC3-214ENST00000494943 CCP110O43303 1012 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 MNS1Q8NEH6 495 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 SNX21Q969T3 373 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 ACBD3Q9H3P7 528 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 HECW1Q76N89 1606 aa7.45□□□□□ -1.22
PHC3-214ENST00000494943 RABEP1Q15276 862 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 PLEKHH1Q9ULM0 1364 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 TPM1P09493 284 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 FAM107BQ9H098 131 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 KDM2BQ8NHM5 1336 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 SUPT6HQ7KZ85 1726 aaKnown RBP7.44□□□□□ -1.22
PHC3-214ENST00000494943 ADAMTS12P58397 1594 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 HOMEZQ8IX15 550 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 KRT222Q8N1A0 295 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 BCCIPQ9P287 314 aaKnown RBP eCLIP7.44□□□□□ -1.22
PHC3-214ENST00000494943 FGD5Q6ZNL6 1462 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 RSPH4AQ5TD94 716 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 PAXIP1Q6ZW49 1069 aaPredicted RBP7.44□□□□□ -1.22
PHC3-214ENST00000494943 PANK2Q9BZ23 570 aa7.44□□□□□ -1.22
PHC3-214ENST00000494943 RBM28Q9NW13 759 aaKnown RBP7.44□□□□□ -1.22
PHC3-214ENST00000494943 MCM2P49736 904 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 CCDC184Q52MB2 194 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 LEKR1Q6ZMV7 388 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 TEX2Q8IWB9 1127 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 CCDC112Q8NEF3 446 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 RIMBP3CA6NJZ7 1639 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms