RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
UBA3-211ENST00000493957 SLIT1O75093 1534 aa17.43■□□□□ 0.38
UBA3-211ENST00000493957 IQGAP1P46940 1657 aa17.43■□□□□ 0.38
UBA3-211ENST00000493957 PTPRTO14522 1441 aa17.43■□□□□ 0.38
UBA3-211ENST00000493957 ARHGAP23Q9P227 1491 aa17.43■□□□□ 0.38
UBA3-211ENST00000493957 KIF1BO60333 1816 aa17.42■□□□□ 0.38
UBA3-211ENST00000493957 TRPM2O94759 1503 aa17.42■□□□□ 0.38
UBA3-211ENST00000493957 PKD2Q13563 968 aa17.42■□□□□ 0.38
UBA3-211ENST00000493957 THEMISQ8N1K5 641 aaPredicted RBP17.42■□□□□ 0.38
UBA3-211ENST00000493957 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
UBA3-211ENST00000493957 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
UBA3-211ENST00000493957 SCAF11Q99590 1463 aaKnown RBP17.38■□□□□ 0.37
UBA3-211ENST00000493957 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
UBA3-211ENST00000493957 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
UBA3-211ENST00000493957 MED14O60244 1454 aa17.37■□□□□ 0.37
UBA3-211ENST00000493957 LTKP29376 864 aa17.37■□□□□ 0.37
UBA3-211ENST00000493957 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
UBA3-211ENST00000493957 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
UBA3-211ENST00000493957 MPHOSPH9Q99550 1183 aa17.37■□□□□ 0.37
UBA3-211ENST00000493957 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
UBA3-211ENST00000493957 STRCP1A6NGW2 1772 aa17.36■□□□□ 0.37
UBA3-211ENST00000493957 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
UBA3-211ENST00000493957 ZFYVE9O95405 1425 aa17.35■□□□□ 0.37
UBA3-211ENST00000493957 LTBP4Q8N2S1 1624 aa17.35■□□□□ 0.37
UBA3-211ENST00000493957 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
UBA3-211ENST00000493957 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
UBA3-211ENST00000493957 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
UBA3-211ENST00000493957 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
UBA3-211ENST00000493957 PPLO60437 1756 aa17.3■□□□□ 0.36
UBA3-211ENST00000493957 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
UBA3-211ENST00000493957 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
UBA3-211ENST00000493957 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
UBA3-211ENST00000493957 IFT172Q9UG01 1749 aa17.27■□□□□ 0.36
UBA3-211ENST00000493957 NRXN3Q9Y4C0 1643 aa17.27■□□□□ 0.36
UBA3-211ENST00000493957 HRCP23327 699 aa17.26■□□□□ 0.35
UBA3-211ENST00000493957 ACIN1Q9UKV3 1341 aaKnown RBP17.25■□□□□ 0.35
UBA3-211ENST00000493957 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
UBA3-211ENST00000493957 KCNA4P22459 653 aa17.25■□□□□ 0.35
UBA3-211ENST00000493957 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
UBA3-211ENST00000493957 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
UBA3-211ENST00000493957 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
UBA3-211ENST00000493957 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
UBA3-211ENST00000493957 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
UBA3-211ENST00000493957 PPP1R15AO75807 674 aaPredicted RBP17.22■□□□□ 0.35
UBA3-211ENST00000493957 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
UBA3-211ENST00000493957 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
UBA3-211ENST00000493957 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
UBA3-211ENST00000493957 ANKRD30BQ9BXX2 1392 aa17.21■□□□□ 0.35
UBA3-211ENST00000493957 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
UBA3-211ENST00000493957 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.34
UBA3-211ENST00000493957 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
UBA3-211ENST00000493957 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBA3-211ENST00000493957 CPS1P31327 1500 aa17.19■□□□□ 0.34
UBA3-211ENST00000493957 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
UBA3-211ENST00000493957 BCANQ96GW7 911 aa17.18■□□□□ 0.34
UBA3-211ENST00000493957 DIP2AQ14689 1571 aa17.18■□□□□ 0.34
UBA3-211ENST00000493957 HDGFP51858 240 aaKnown RBP17.16■□□□□ 0.34
UBA3-211ENST00000493957 RGL3Q3MIN7 710 aa17.16■□□□□ 0.34
UBA3-211ENST00000493957 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
UBA3-211ENST00000493957 SP7Q8TDD2 431 aaPredicted RBP17.13■□□□□ 0.33
UBA3-211ENST00000493957 XRN1Q8IZH2 1706 aaKnown RBP17.13■□□□□ 0.33
UBA3-211ENST00000493957 IQSEC2Q5JU85 1478 aa17.12■□□□□ 0.33
UBA3-211ENST00000493957 ALKQ9UM73 1620 aa17.12■□□□□ 0.33
UBA3-211ENST00000493957 PTPRUQ92729 1446 aa17.12■□□□□ 0.33
UBA3-211ENST00000493957 ILDR1Q86SU0 546 aaPredicted RBP17.11■□□□□ 0.33
UBA3-211ENST00000493957 RPGRIP1LQ68CZ1 1315 aa17.11■□□□□ 0.33
UBA3-211ENST00000493957 DHX57Q6P158 1386 aaKnown RBP17.11■□□□□ 0.33
UBA3-211ENST00000493957 POLA2Q14181 598 aa17.1■□□□□ 0.33
UBA3-211ENST00000493957 TBX22Q9Y458 520 aa17.1■□□□□ 0.33
UBA3-211ENST00000493957 ADGRF5Q8IZF2 1346 aa17.1■□□□□ 0.33
UBA3-211ENST00000493957 KCNA6P17658 529 aa17.09■□□□□ 0.33
UBA3-211ENST00000493957 METP08581 1390 aa17.09■□□□□ 0.33
UBA3-211ENST00000493957 NKTRP30414 1462 aaKnown RBP17.08■□□□□ 0.32
UBA3-211ENST00000493957 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
UBA3-211ENST00000493957 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
UBA3-211ENST00000493957 VGFO15240 615 aaPredicted RBP17.07■□□□□ 0.32
UBA3-211ENST00000493957 FBXO41Q8TF61 875 aa17.07■□□□□ 0.32
UBA3-211ENST00000493957 MYOM2P54296 1465 aa17.06■□□□□ 0.32
UBA3-211ENST00000493957 NRXN1Q9ULB1 1477 aa17.05■□□□□ 0.32
UBA3-211ENST00000493957 PIK3C2GO75747 1445 aa17.05■□□□□ 0.32
UBA3-211ENST00000493957 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
UBA3-211ENST00000493957 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
UBA3-211ENST00000493957 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
UBA3-211ENST00000493957 LAMC1P11047 1609 aa17.03■□□□□ 0.32
UBA3-211ENST00000493957 PROSER2Q86WR7 435 aaPredicted RBP17.02■□□□□ 0.32
UBA3-211ENST00000493957 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
UBA3-211ENST00000493957 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
UBA3-211ENST00000493957 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
UBA3-211ENST00000493957 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
UBA3-211ENST00000493957 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
UBA3-211ENST00000493957 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
UBA3-211ENST00000493957 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
UBA3-211ENST00000493957 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
UBA3-211ENST00000493957 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
UBA3-211ENST00000493957 CFAP70Q5T0N1 1121 aa16.96■□□□□ 0.31
UBA3-211ENST00000493957 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.31
UBA3-211ENST00000493957 ADGRB1O14514 1584 aa16.95■□□□□ 0.3
UBA3-211ENST00000493957 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
UBA3-211ENST00000493957 PIP4K2BP78356 416 aa16.94■□□□□ 0.3
UBA3-211ENST00000493957 C14orf93Q9H972 538 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms