RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TCOF1Q13428 1488 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-208ENST00000490653 VPS8Q8N3P4 1428 aa11.6□□□□□ -0.55
PRPF4B-208ENST00000490653 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
PRPF4B-208ENST00000490653 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
PRPF4B-208ENST00000490653 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
PRPF4B-208ENST00000490653 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
PRPF4B-208ENST00000490653 EHBP1L1Q8N3D4 1523 aa11.6□□□□□ -0.55
PRPF4B-208ENST00000490653 PYGBP11216 843 aa11.59□□□□□ -0.55
PRPF4B-208ENST00000490653 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
PRPF4B-208ENST00000490653 INO80Q9ULG1 1556 aaPredicted RBP11.58□□□□□ -0.55
PRPF4B-208ENST00000490653 PLCG2P16885 1265 aa11.58□□□□□ -0.56
PRPF4B-208ENST00000490653 GGT6Q6P531 493 aa11.58□□□□□ -0.56
PRPF4B-208ENST00000490653 MROH2AA6NES4 1674 aa11.58□□□□□ -0.56
PRPF4B-208ENST00000490653 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
PRPF4B-208ENST00000490653 PLA2R1Q13018 1463 aa11.57□□□□□ -0.56
PRPF4B-208ENST00000490653 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
PRPF4B-208ENST00000490653 MYO3AQ8NEV4 1616 aa11.57□□□□□ -0.56
PRPF4B-208ENST00000490653 ATP7AQ04656 1500 aa11.56□□□□□ -0.56
PRPF4B-208ENST00000490653 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
PRPF4B-208ENST00000490653 A2MP01023 1474 aa11.56□□□□□ -0.56
PRPF4B-208ENST00000490653 PLEKHH2Q8IVE3 1493 aa11.56□□□□□ -0.56
PRPF4B-208ENST00000490653 CEP170BQ9Y4F5 1589 aaPredicted RBP11.55□□□□□ -0.56
PRPF4B-208ENST00000490653 ESF1Q9H501 851 aaKnown RBP11.55□□□□□ -0.56
PRPF4B-208ENST00000490653 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
PRPF4B-208ENST00000490653 CLTCQ00610 1675 aaKnown RBP11.55□□□□□ -0.56
PRPF4B-208ENST00000490653 UBAP1LF5GYI3 381 aa11.54□□□□□ -0.56
PRPF4B-208ENST00000490653 SLAIN1Q8ND83 568 aa11.54□□□□□ -0.56
PRPF4B-208ENST00000490653 NEURL4Q96JN8 1562 aa11.54□□□□□ -0.56
PRPF4B-208ENST00000490653 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
PRPF4B-208ENST00000490653 FBXO31Q5XUX0 539 aaPredicted RBP11.53□□□□□ -0.56
PRPF4B-208ENST00000490653 PCDHB8Q9UN66 801 aa11.53□□□□□ -0.56
PRPF4B-208ENST00000490653 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
PRPF4B-208ENST00000490653 DNMT1P26358 1616 aaKnown RBP11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 KIF3BO15066 747 aa11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 HSPA1LP34931 641 aa11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 PKD2Q13563 968 aa11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 RTEL1-TNFRSF6BF6WH68 1400 aa11.51□□□□□ -0.57
PRPF4B-208ENST00000490653 RSPH4AQ5TD94 716 aa11.5□□□□□ -0.57
PRPF4B-208ENST00000490653 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
PRPF4B-208ENST00000490653 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
PRPF4B-208ENST00000490653 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
PRPF4B-208ENST00000490653 MAP3K1Q13233 1512 aa11.49□□□□□ -0.57
PRPF4B-208ENST00000490653 GSE1Q14687 1217 aa11.48□□□□□ -0.57
PRPF4B-208ENST00000490653 CCDC141Q6ZP82 1450 aa11.48□□□□□ -0.57
PRPF4B-208ENST00000490653 VWDEQ8N2E2 1590 aa11.48□□□□□ -0.57
PRPF4B-208ENST00000490653 MED1Q15648 1581 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-208ENST00000490653 ADGBQ8N7X0 1667 aa11.46□□□□□ -0.57
PRPF4B-208ENST00000490653 MYOM3Q5VTT5 1437 aa11.46□□□□□ -0.57
PRPF4B-208ENST00000490653 ST18O60284 1047 aa11.46□□□□□ -0.57
PRPF4B-208ENST00000490653 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
PRPF4B-208ENST00000490653 SHANK2Q9UPX8 1470 aa11.45□□□□□ -0.58
PRPF4B-208ENST00000490653 ZNF467Q7Z7K2 595 aaPredicted RBP11.45□□□□□ -0.58
PRPF4B-208ENST00000490653 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
PRPF4B-208ENST00000490653 TNRQ92752 1358 aa11.44□□□□□ -0.58
PRPF4B-208ENST00000490653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRPF4B-208ENST00000490653 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
PRPF4B-208ENST00000490653 PPARGC1BQ86YN6 1023 aaKnown RBP11.44□□□□□ -0.58
PRPF4B-208ENST00000490653 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
PRPF4B-208ENST00000490653 PZPP20742 1482 aa11.44□□□□□ -0.58
PRPF4B-208ENST00000490653 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
PRPF4B-208ENST00000490653 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
PRPF4B-208ENST00000490653 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
PRPF4B-208ENST00000490653 ABCC5O15440 1437 aa11.43□□□□□ -0.58
PRPF4B-208ENST00000490653 MIA2Q96PC5 1412 aa11.43□□□□□ -0.58
PRPF4B-208ENST00000490653 WASHC2CQ9Y4E1 1318 aa11.42□□□□□ -0.58
PRPF4B-208ENST00000490653 MED14O60244 1454 aa11.42□□□□□ -0.58
PRPF4B-208ENST00000490653 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
PRPF4B-208ENST00000490653 CPS1P31327 1500 aa11.4□□□□□ -0.58
PRPF4B-208ENST00000490653 KDM5DQ9BY66 1539 aa11.4□□□□□ -0.58
PRPF4B-208ENST00000490653 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
PRPF4B-208ENST00000490653 RGS17Q9UGC6 210 aaPredicted RBP11.4□□□□□ -0.58
PRPF4B-208ENST00000490653 PTPN23Q9H3S7 1636 aa11.39□□□□□ -0.59
PRPF4B-208ENST00000490653 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
PRPF4B-208ENST00000490653 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
PRPF4B-208ENST00000490653 LRRC7Q96NW7 1537 aa11.39□□□□□ -0.59
PRPF4B-208ENST00000490653 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
PRPF4B-208ENST00000490653 FGD6Q6ZV73 1430 aa11.38□□□□□ -0.59
PRPF4B-208ENST00000490653 POLR1AO95602 1720 aaPredicted RBP11.38□□□□□ -0.59
PRPF4B-208ENST00000490653 CFAP65Q6ZU64 1925 aaKnown RBP11.37□□□□□ -0.59
PRPF4B-208ENST00000490653 FAM50AQ14320 339 aaKnown RBP11.37□□□□□ -0.59
PRPF4B-208ENST00000490653 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
PRPF4B-208ENST00000490653 DAPK1P53355 1430 aa11.36□□□□□ -0.59
PRPF4B-208ENST00000490653 DEPDC5O75140 1603 aa11.36□□□□□ -0.59
PRPF4B-208ENST00000490653 TOM1O60784 492 aa11.36□□□□□ -0.59
PRPF4B-208ENST00000490653 ANKLE2Q86XL3 938 aa11.36□□□□□ -0.59
PRPF4B-208ENST00000490653 NLRP1Q9C000 1473 aa11.36□□□□□ -0.59
PRPF4B-208ENST00000490653 UGGT1Q9NYU2 1555 aa11.36□□□□□ -0.59
PRPF4B-208ENST00000490653 ABCC3O15438 1527 aa11.35□□□□□ -0.59
PRPF4B-208ENST00000490653 SNPHO15079 494 aa11.35□□□□□ -0.59
PRPF4B-208ENST00000490653 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
PRPF4B-208ENST00000490653 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
PRPF4B-208ENST00000490653 ERVK-7P63135 1459 aa11.34□□□□□ -0.59
PRPF4B-208ENST00000490653 LTKP29376 864 aa11.34□□□□□ -0.59
PRPF4B-208ENST00000490653 PSEN1P49768 467 aa11.34□□□□□ -0.59
PRPF4B-208ENST00000490653 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
PRPF4B-208ENST00000490653 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
PRPF4B-208ENST00000490653 FAM135AQ9P2D6 1515 aa11.34□□□□□ -0.59
PRPF4B-208ENST00000490653 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms