RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.54
SNRNP200-203ENST00000480242 IL27Q8NEV9 243 aa11.7□□□□□ -0.54
SNRNP200-203ENST00000480242 NWD1Q149M9 1564 aa11.7□□□□□ -0.54
SNRNP200-203ENST00000480242 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-203ENST00000480242 NOP58Q9Y2X3 529 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-203ENST00000480242 ANP32CO43423 234 aa11.69□□□□□ -0.54
SNRNP200-203ENST00000480242 PPP6R1Q9UPN7 881 aa11.69□□□□□ -0.54
SNRNP200-203ENST00000480242 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
SNRNP200-203ENST00000480242 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
SNRNP200-203ENST00000480242 RTL5Q5HYW3 569 aaPredicted RBP11.67□□□□□ -0.54
SNRNP200-203ENST00000480242 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
SNRNP200-203ENST00000480242 DLC1Q96QB1 1528 aa11.67□□□□□ -0.54
SNRNP200-203ENST00000480242 NPATQ14207 1427 aa11.67□□□□□ -0.54
SNRNP200-203ENST00000480242 ERVK-7P63135 1459 aa11.67□□□□□ -0.54
SNRNP200-203ENST00000480242 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRNP200-203ENST00000480242 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
SNRNP200-203ENST00000480242 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
SNRNP200-203ENST00000480242 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.54
SNRNP200-203ENST00000480242 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
SNRNP200-203ENST00000480242 MED14O60244 1454 aa11.65□□□□□ -0.54
SNRNP200-203ENST00000480242 CPS1P31327 1500 aa11.65□□□□□ -0.55
SNRNP200-203ENST00000480242 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
SNRNP200-203ENST00000480242 YEATS2Q9ULM3 1422 aa11.64□□□□□ -0.55
SNRNP200-203ENST00000480242 ANKRD26Q9UPS8 1709 aa11.64□□□□□ -0.55
SNRNP200-203ENST00000480242 CYB5RLQ6IPT4 315 aa11.64□□□□□ -0.55
SNRNP200-203ENST00000480242 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
SNRNP200-203ENST00000480242 POLR3GLQ9BT43 218 aa11.63□□□□□ -0.55
SNRNP200-203ENST00000480242 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
SNRNP200-203ENST00000480242 LRRC7Q96NW7 1537 aa11.62□□□□□ -0.55
SNRNP200-203ENST00000480242 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-203ENST00000480242 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
SNRNP200-203ENST00000480242 NRKQ7Z2Y5 1582 aa11.6□□□□□ -0.55
SNRNP200-203ENST00000480242 UBE2Q2Q8WVN8 375 aa11.6□□□□□ -0.55
SNRNP200-203ENST00000480242 PPP4R2Q9NY27 417 aa11.6□□□□□ -0.55
SNRNP200-203ENST00000480242 SIN3AQ96ST3 1273 aa11.59□□□□□ -0.55
SNRNP200-203ENST00000480242 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.55
SNRNP200-203ENST00000480242 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.55
SNRNP200-203ENST00000480242 PIK3C2GO75747 1445 aa11.58□□□□□ -0.56
SNRNP200-203ENST00000480242 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
SNRNP200-203ENST00000480242 AKAP12Q02952 1782 aa11.57□□□□□ -0.56
SNRNP200-203ENST00000480242 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
SNRNP200-203ENST00000480242 QRICH2Q9H0J4 1663 aa11.56□□□□□ -0.56
SNRNP200-203ENST00000480242 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
SNRNP200-203ENST00000480242 ALKQ9UM73 1620 aa11.55□□□□□ -0.56
SNRNP200-203ENST00000480242 TECPR2O15040 1411 aa11.55□□□□□ -0.56
SNRNP200-203ENST00000480242 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-203ENST00000480242 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
SNRNP200-203ENST00000480242 DAXXQ9UER7 740 aaPredicted RBP11.54□□□□□ -0.56
SNRNP200-203ENST00000480242 STAC3Q96MF2 364 aa11.54□□□□□ -0.56
SNRNP200-203ENST00000480242 LMTK3Q96Q04 1460 aa11.53□□□□□ -0.56
SNRNP200-203ENST00000480242 NALCNQ8IZF0 1738 aa11.53□□□□□ -0.56
SNRNP200-203ENST00000480242 CEP170BQ9Y4F5 1589 aaPredicted RBP11.52□□□□□ -0.57
SNRNP200-203ENST00000480242 MON2Q7Z3U7 1717 aa11.52□□□□□ -0.57
SNRNP200-203ENST00000480242 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.57
SNRNP200-203ENST00000480242 SBNO2Q9Y2G9 1366 aa11.51□□□□□ -0.57
SNRNP200-203ENST00000480242 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
SNRNP200-203ENST00000480242 NUP155O75694 1391 aa11.5□□□□□ -0.57
SNRNP200-203ENST00000480242 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
SNRNP200-203ENST00000480242 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
SNRNP200-203ENST00000480242 IPO9Q96P70 1041 aaKnown RBP11.5□□□□□ -0.57
SNRNP200-203ENST00000480242 FOXD1Q16676 465 aa11.5□□□□□ -0.57
SNRNP200-203ENST00000480242 PTPRMP28827 1452 aa11.49□□□□□ -0.57
SNRNP200-203ENST00000480242 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
SNRNP200-203ENST00000480242 STRCQ7RTU9 1775 aa11.48□□□□□ -0.57
SNRNP200-203ENST00000480242 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-203ENST00000480242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■□□□□ 10.3
SNRNP200-203ENST00000480242 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
SNRNP200-203ENST00000480242 ITSN1Q15811 1721 aa11.46□□□□□ -0.57
SNRNP200-203ENST00000480242 SENP3Q9H4L4 574 aaPredicted RBP11.46□□□□□ -0.58
SNRNP200-203ENST00000480242 NEFMP07197 916 aa11.45□□□□□ -0.58
SNRNP200-203ENST00000480242 MPHOSPH9Q99550 1183 aa11.45□□□□□ -0.58
SNRNP200-203ENST00000480242 FMN2Q9NZ56 1722 aa11.44□□□□□ -0.58
SNRNP200-203ENST00000480242 HNRNPMP52272 730 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNRNP200-203ENST00000480242 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
SNRNP200-203ENST00000480242 BRPF3Q9ULD4 1205 aa11.43□□□□□ -0.58
SNRNP200-203ENST00000480242 SHPRHQ149N8 1683 aa11.43□□□□□ -0.58
SNRNP200-203ENST00000480242 STRCP1A6NGW2 1772 aa11.43□□□□□ -0.58
SNRNP200-203ENST00000480242 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
SNRNP200-203ENST00000480242 MST1RQ04912 1400 aa11.42□□□□□ -0.58
SNRNP200-203ENST00000480242 KIF20BQ96Q89 1820 aa11.41□□□□□ -0.58
SNRNP200-203ENST00000480242 CAMTA1Q9Y6Y1 1673 aa11.4□□□□□ -0.58
SNRNP200-203ENST00000480242 CDC42BPGQ6DT37 1551 aa11.4□□□□□ -0.58
SNRNP200-203ENST00000480242 CCDC184Q52MB2 194 aa11.4□□□□□ -0.59
SNRNP200-203ENST00000480242 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
SNRNP200-203ENST00000480242 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
SNRNP200-203ENST00000480242 ARID4BQ4LE39 1312 aaPredicted RBP11.38□□□□□ -0.59
SNRNP200-203ENST00000480242 RPGRIP1LQ68CZ1 1315 aa11.38□□□□□ -0.59
SNRNP200-203ENST00000480242 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.37□□□□□ -0.59
SNRNP200-203ENST00000480242 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
SNRNP200-203ENST00000480242 SLC4A1APQ9BWU0 796 aaKnown RBP11.37□□□□□ -0.59
SNRNP200-203ENST00000480242 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
SNRNP200-203ENST00000480242 PKNOX2Q96KN3 472 aa11.37□□□□□ -0.59
SNRNP200-203ENST00000480242 SETD1BQ9UPS6 1966 aaKnown RBP11.36□□□□□ -0.59
SNRNP200-203ENST00000480242 TULP4Q9NRJ4 1543 aa11.36□□□□□ -0.59
SNRNP200-203ENST00000480242 TRPM3Q9HCF6 1732 aaPredicted RBP11.36□□□□□ -0.59
SNRNP200-203ENST00000480242 AFAP1Q8N556 730 aa11.36□□□□□ -0.59
SNRNP200-203ENST00000480242 KANK1Q14678 1352 aa11.36□□□□□ -0.59
SNRNP200-203ENST00000480242 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
SNRNP200-203ENST00000480242 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
SNRNP200-203ENST00000480242 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms