RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
SNRNP200-203ENST00000480242 CCDC180Q9P1Z9 1646 aa17.6■□□□□ 0.41
SNRNP200-203ENST00000480242 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
SNRNP200-203ENST00000480242 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
SNRNP200-203ENST00000480242 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
SNRNP200-203ENST00000480242 NACADO15069 1562 aa16■□□□□ 0.15
SNRNP200-203ENST00000480242 UNC13AQ9UPW8 1703 aa15.85■□□□□ 0.13
SNRNP200-203ENST00000480242 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
SNRNP200-203ENST00000480242 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
SNRNP200-203ENST00000480242 BICRAQ9NZM4 1560 aa15.47■□□□□ 0.07
SNRNP200-203ENST00000480242 ABCC9O60706 1549 aa15.43■□□□□ 0.06
SNRNP200-203ENST00000480242 PEG3Q9GZU2 1588 aa15.32■□□□□ 0.04
SNRNP200-203ENST00000480242 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
SNRNP200-203ENST00000480242 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
SNRNP200-203ENST00000480242 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
SNRNP200-203ENST00000480242 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
SNRNP200-203ENST00000480242 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.01
SNRNP200-203ENST00000480242 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
SNRNP200-203ENST00000480242 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
SNRNP200-203ENST00000480242 HMGXB3Q12766 1538 aa14.86□□□□□ -0.03
SNRNP200-203ENST00000480242 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
SNRNP200-203ENST00000480242 MROH2BQ7Z745 1585 aa14.71□□□□□ -0.05
SNRNP200-203ENST00000480242 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
SNRNP200-203ENST00000480242 WIZO95785 1651 aa14.64□□□□□ -0.07
SNRNP200-203ENST00000480242 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
SNRNP200-203ENST00000480242 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
SNRNP200-203ENST00000480242 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
SNRNP200-203ENST00000480242 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
SNRNP200-203ENST00000480242 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
SNRNP200-203ENST00000480242 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
SNRNP200-203ENST00000480242 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
SNRNP200-203ENST00000480242 HRCP23327 699 aa14.25□□□□□ -0.13
SNRNP200-203ENST00000480242 LAMC3Q9Y6N6 1575 aa14.23□□□□□ -0.13
SNRNP200-203ENST00000480242 CCDC88BA6NC98 1476 aa14.2□□□□□ -0.14
SNRNP200-203ENST00000480242 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
SNRNP200-203ENST00000480242 CFTRP13569 1480 aa14.18□□□□□ -0.14
SNRNP200-203ENST00000480242 TOP2BQ02880 1626 aa14.11□□□□□ -0.15
SNRNP200-203ENST00000480242 PPARGC1BQ86YN6 1023 aaKnown RBP14.08□□□□□ -0.16
SNRNP200-203ENST00000480242 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
SNRNP200-203ENST00000480242 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
SNRNP200-203ENST00000480242 KIF21AQ7Z4S6 1674 aa13.98□□□□□ -0.17
SNRNP200-203ENST00000480242 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
SNRNP200-203ENST00000480242 WDR62O43379 1518 aa13.95□□□□□ -0.18
SNRNP200-203ENST00000480242 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
SNRNP200-203ENST00000480242 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
SNRNP200-203ENST00000480242 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-203ENST00000480242 ABCA5Q8WWZ7 1642 aa13.89□□□□□ -0.19
SNRNP200-203ENST00000480242 CUX1P39880 1505 aa13.86□□□□□ -0.19
SNRNP200-203ENST00000480242 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
SNRNP200-203ENST00000480242 KIF21BO75037 1637 aa13.83□□□□□ -0.2
SNRNP200-203ENST00000480242 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.23e-8■■■■□ 21.2
SNRNP200-203ENST00000480242 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
SNRNP200-203ENST00000480242 PBRM1Q86U86 1689 aa13.73□□□□□ -0.21
SNRNP200-203ENST00000480242 CUL7Q14999 1698 aa13.73□□□□□ -0.21
SNRNP200-203ENST00000480242 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
SNRNP200-203ENST00000480242 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.21
SNRNP200-203ENST00000480242 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
SNRNP200-203ENST00000480242 EEA1Q15075 1411 aa13.69□□□□□ -0.22
SNRNP200-203ENST00000480242 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
SNRNP200-203ENST00000480242 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
SNRNP200-203ENST00000480242 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
SNRNP200-203ENST00000480242 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
SNRNP200-203ENST00000480242 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
SNRNP200-203ENST00000480242 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
SNRNP200-203ENST00000480242 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
SNRNP200-203ENST00000480242 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
SNRNP200-203ENST00000480242 CUX2O14529 1486 aa13.57□□□□□ -0.24
SNRNP200-203ENST00000480242 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
SNRNP200-203ENST00000480242 PRXQ9BXM0 1461 aa13.55□□□□□ -0.24
SNRNP200-203ENST00000480242 NESP48681 1621 aa13.55□□□□□ -0.24
SNRNP200-203ENST00000480242 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
SNRNP200-203ENST00000480242 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
SNRNP200-203ENST00000480242 MYT1Q01538 1121 aa13.53□□□□□ -0.24
SNRNP200-203ENST00000480242 SHROOM2Q13796 1616 aa13.51□□□□□ -0.25
SNRNP200-203ENST00000480242 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
SNRNP200-203ENST00000480242 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
SNRNP200-203ENST00000480242 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
SNRNP200-203ENST00000480242 FGD5Q6ZNL6 1462 aa13.49□□□□□ -0.25
SNRNP200-203ENST00000480242 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
SNRNP200-203ENST00000480242 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
SNRNP200-203ENST00000480242 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
SNRNP200-203ENST00000480242 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
SNRNP200-203ENST00000480242 TRIM26Q12899 539 aaPredicted RBP13.34□□□□□ -0.27
SNRNP200-203ENST00000480242 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
SNRNP200-203ENST00000480242 LOC105371045A0A1W2PR82 267 aa13.33□□□□□ -0.28
SNRNP200-203ENST00000480242 CFAP43Q8NDM7 1665 aa13.32□□□□□ -0.28
SNRNP200-203ENST00000480242 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
SNRNP200-203ENST00000480242 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
SNRNP200-203ENST00000480242 MAP3K1Q13233 1512 aa13.31□□□□□ -0.28
SNRNP200-203ENST00000480242 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
SNRNP200-203ENST00000480242 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
SNRNP200-203ENST00000480242 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.28
SNRNP200-203ENST00000480242 CHD1O14646 1710 aa13.25□□□□□ -0.29
SNRNP200-203ENST00000480242 SOGA1O94964 1423 aa13.24□□□□□ -0.29
SNRNP200-203ENST00000480242 NUP160Q12769 1436 aa13.24□□□□□ -0.29
SNRNP200-203ENST00000480242 KIF27Q86VH2 1401 aa13.24□□□□□ -0.29
SNRNP200-203ENST00000480242 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
SNRNP200-203ENST00000480242 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.294e-7■■■■□ 25.4
SNRNP200-203ENST00000480242 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
SNRNP200-203ENST00000480242 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms