RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 POLR1AO95602 1720 aaPredicted RBP29.01■■■□□ 2.23
SH3D21-202ENST00000474766 TNRQ92752 1358 aa28.99■■■□□ 2.23
SH3D21-202ENST00000474766 E9PCH4 1651 aa28.98■■■□□ 2.23
SH3D21-202ENST00000474766 ZNF142P52746 1687 aaPredicted RBP28.97■■■□□ 2.23
SH3D21-202ENST00000474766 CEP170BQ9Y4F5 1589 aaPredicted RBP28.94■■■□□ 2.22
SH3D21-202ENST00000474766 HSPA2P54652 639 aa28.93■■■□□ 2.22
SH3D21-202ENST00000474766 KIF7Q2M1P5 1343 aa28.92■■■□□ 2.22
SH3D21-202ENST00000474766 SYNMO15061 1565 aa28.91■■■□□ 2.22
SH3D21-202ENST00000474766 NOS1P29475 1434 aa28.89■■■□□ 2.22
SH3D21-202ENST00000474766 A2ML1A8K2U0 1454 aa28.88■■■□□ 2.21
SH3D21-202ENST00000474766 PRKRIP1Q9H875 184 aaPredicted RBP28.87■■■□□ 2.21
SH3D21-202ENST00000474766 NLRP1Q9C000 1473 aa28.87■■■□□ 2.21
SH3D21-202ENST00000474766 HNRNPUQ00839 825 aaKnown RBP eCLIP28.86■■■□□ 2.21
SH3D21-202ENST00000474766 PPP4R2Q9NY27 417 aa28.86■■■□□ 2.21
SH3D21-202ENST00000474766 USP47Q96K76 1375 aa28.84■■■□□ 2.21
SH3D21-202ENST00000474766 RALGAPBQ86X10 1494 aa28.83■■■□□ 2.21
SH3D21-202ENST00000474766 PIK3C2BO00750 1634 aa28.81■■■□□ 2.2
SH3D21-202ENST00000474766 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
SH3D21-202ENST00000474766 UGGT1Q9NYU2 1555 aa28.8■■■□□ 2.2
SH3D21-202ENST00000474766 UBR1Q8IWV7 1749 aa28.79■■■□□ 2.2
SH3D21-202ENST00000474766 STRCQ7RTU9 1775 aa28.79■■■□□ 2.2
SH3D21-202ENST00000474766 CCDC184Q52MB2 194 aa28.76■■■□□ 2.19
SH3D21-202ENST00000474766 IDI1Q13907 227 aa28.76■■■□□ 2.19
SH3D21-202ENST00000474766 PLA2R1Q13018 1463 aa28.75■■■□□ 2.19
SH3D21-202ENST00000474766 ZNF326Q5BKZ1 582 aaKnown RBP28.75■■■□□ 2.19
SH3D21-202ENST00000474766 PTPRTO14522 1441 aa28.74■■■□□ 2.19
SH3D21-202ENST00000474766 KDM5AP29375 1690 aaKnown RBP28.71■■■□□ 2.19
SH3D21-202ENST00000474766 SLC52A1Q9NWF4 448 aa28.7■■■□□ 2.19
SH3D21-202ENST00000474766 MYO5BQ9ULV0 1848 aa28.7■■■□□ 2.18
SH3D21-202ENST00000474766 ADGRB3O60242 1522 aa28.69■■■□□ 2.18
SH3D21-202ENST00000474766 TRPM2O94759 1503 aa28.69■■■□□ 2.18
SH3D21-202ENST00000474766 THEMISQ8N1K5 641 aaPredicted RBP28.67■■■□□ 2.18
SH3D21-202ENST00000474766 CLTCL1P53675 1640 aa28.67■■■□□ 2.18
SH3D21-202ENST00000474766 IRX6P78412 446 aaPredicted RBP28.66■■■□□ 2.18
SH3D21-202ENST00000474766 MRS2Q9HD23 443 aa28.66■■■□□ 2.18
SH3D21-202ENST00000474766 TMEM131LA2VDJ0 1609 aa28.66■■■□□ 2.18
SH3D21-202ENST00000474766 CARD11Q9BXL7 1154 aa28.65■■■□□ 2.18
SH3D21-202ENST00000474766 NCKAP5LQ9HCH0 1330 aa28.64■■■□□ 2.18
SH3D21-202ENST00000474766 DCAF11Q8TEB1 546 aa28.64■■■□□ 2.17
SH3D21-202ENST00000474766 ROCK2O75116 1388 aaKnown RBP28.63■■■□□ 2.17
SH3D21-202ENST00000474766 CCDC144AA2RUR9 1427 aa28.62■■■□□ 2.17
SH3D21-202ENST00000474766 STAG3Q9UJ98 1225 aa28.62■■■□□ 2.17
SH3D21-202ENST00000474766 SLIT1O75093 1534 aa28.62■■■□□ 2.17
SH3D21-202ENST00000474766 NEURL4Q96JN8 1562 aa28.61■■■□□ 2.17
SH3D21-202ENST00000474766 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
SH3D21-202ENST00000474766 ZBED9Q6R2W3 1325 aa28.6■■■□□ 2.17
SH3D21-202ENST00000474766 KDM2AQ9Y2K7 1162 aa28.6■■■□□ 2.17
SH3D21-202ENST00000474766 DEKP35659 375 aaKnown RBP28.58■■■□□ 2.17
SH3D21-202ENST00000474766 TMEM2Q9UHN6 1383 aa28.57■■■□□ 2.16
SH3D21-202ENST00000474766 PRAG1Q86YV5 1406 aa28.57■■■□□ 2.16
SH3D21-202ENST00000474766 FAM9BQ8IZU0 186 aa28.57■■■□□ 2.16
SH3D21-202ENST00000474766 CHGAP10645 457 aaKnown RBP28.55■■■□□ 2.16
SH3D21-202ENST00000474766 KIF1BO60333 1816 aa28.55■■■□□ 2.16
SH3D21-202ENST00000474766 TRPM1Q7Z4N2 1603 aa28.54■■■□□ 2.16
SH3D21-202ENST00000474766 ANKLE2Q86XL3 938 aa28.54■■■□□ 2.16
SH3D21-202ENST00000474766 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
SH3D21-202ENST00000474766 LTKP29376 864 aa28.53■■■□□ 2.16
SH3D21-202ENST00000474766 SCAF11Q99590 1463 aaKnown RBP28.52■■■□□ 2.16
SH3D21-202ENST00000474766 NOP58Q9Y2X3 529 aaKnown RBP28.52■■■□□ 2.16
SH3D21-202ENST00000474766 ZFYVE9O95405 1425 aa28.51■■■□□ 2.15
SH3D21-202ENST00000474766 MED14O60244 1454 aa28.5■■■□□ 2.15
SH3D21-202ENST00000474766 GPRASP1Q5JY77 1395 aa28.5■■■□□ 2.15
SH3D21-202ENST00000474766 POLR3GLQ9BT43 218 aa28.49■■■□□ 2.15
SH3D21-202ENST00000474766 DMRT2Q9Y5R5 561 aa28.49■■■□□ 2.15
SH3D21-202ENST00000474766 IQGAP1P46940 1657 aa28.49■■■□□ 2.15
SH3D21-202ENST00000474766 TXNDC2Q86VQ3 553 aa28.48■■■□□ 2.15
SH3D21-202ENST00000474766 NPHP4O75161 1426 aaPredicted RBP28.47■■■□□ 2.15
SH3D21-202ENST00000474766 RIMS2Q9UQ26 1411 aa28.47■■■□□ 2.15
SH3D21-202ENST00000474766 LAMC1P11047 1609 aa28.46■■■□□ 2.15
SH3D21-202ENST00000474766 B4GALNT3Q6L9W6 998 aa28.45■■■□□ 2.14
SH3D21-202ENST00000474766 EID1Q9Y6B2 187 aa28.45■■■□□ 2.14
SH3D21-202ENST00000474766 RGL3Q3MIN7 710 aa28.42■■■□□ 2.14
SH3D21-202ENST00000474766 KTN1Q86UP2 1357 aaKnown RBP28.41■■■□□ 2.14
SH3D21-202ENST00000474766 NEXMIFQ5QGS0 1516 aa28.41■■■□□ 2.14
SH3D21-202ENST00000474766 NUTM2DQ5VT03 806 aaPredicted RBP28.4■■■□□ 2.14
SH3D21-202ENST00000474766 SMG6Q86US8 1419 aaKnown RBP28.39■■■□□ 2.13
SH3D21-202ENST00000474766 NBPF1Q3BBV0 1214 aa28.38■■■□□ 2.13
SH3D21-202ENST00000474766 PPLO60437 1756 aa28.35■■■□□ 2.13
SH3D21-202ENST00000474766 SENP3Q9H4L4 574 aaPredicted RBP28.35■■■□□ 2.13
SH3D21-202ENST00000474766 RNF123Q5XPI4 1314 aa28.34■■■□□ 2.13
SH3D21-202ENST00000474766 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.34■■■□□ 2.13
SH3D21-202ENST00000474766 PNISRQ8TF01 805 aaKnown RBP28.34■■■□□ 2.13
SH3D21-202ENST00000474766 PLEKHG1Q9ULL1 1385 aa28.34■■■□□ 2.13
SH3D21-202ENST00000474766 RALBP1Q15311 655 aa28.33■■■□□ 2.13
SH3D21-202ENST00000474766 HDGFP51858 240 aaKnown RBP28.32■■■□□ 2.12
SH3D21-202ENST00000474766 ZNF335Q9H4Z2 1342 aaPredicted RBP28.32■■■□□ 2.12
SH3D21-202ENST00000474766 IFT172Q9UG01 1749 aa28.32■■■□□ 2.12
SH3D21-202ENST00000474766 BRD4O60885 1362 aaPredicted RBP28.3■■■□□ 2.12
SH3D21-202ENST00000474766 LTBP4Q8N2S1 1624 aa28.3■■■□□ 2.12
SH3D21-202ENST00000474766 NRXN3Q9Y4C0 1643 aa28.29■■■□□ 2.12
SH3D21-202ENST00000474766 MYBBP1AQ9BQG0 1328 aaKnown RBP28.29■■■□□ 2.12
SH3D21-202ENST00000474766 CNGB1Q14028 1251 aaPredicted RBP28.28■■■□□ 2.12
SH3D21-202ENST00000474766 IPO9Q96P70 1041 aaKnown RBP28.28■■■□□ 2.12
SH3D21-202ENST00000474766 TESK2Q96S53 571 aa28.28■■■□□ 2.12
SH3D21-202ENST00000474766 ANP32AP39687 249 aaKnown RBP28.28■■■□□ 2.12
SH3D21-202ENST00000474766 TMC1Q8TDI8 760 aa28.28■■■□□ 2.12
SH3D21-202ENST00000474766 SLC26A8Q96RN1 970 aa28.28■■■□□ 2.12
SH3D21-202ENST00000474766 STRCP1A6NGW2 1772 aa28.27■■■□□ 2.12
SH3D21-202ENST00000474766 LRPPRCP42704 1394 aaKnown RBP28.27■■■□□ 2.12
SH3D21-202ENST00000474766 RPGRIP1LQ68CZ1 1315 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms