RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ZC3H13Q5T200 1668 aaKnown RBP14.22□□□□□ -0.13
SMC4-213ENST00000472282 PZPP20742 1482 aa14.21□□□□□ -0.13
SMC4-213ENST00000472282 FBXO31Q5XUX0 539 aaPredicted RBP14.21□□□□□ -0.13
SMC4-213ENST00000472282 PLCD3Q8N3E9 789 aa14.2□□□□□ -0.14
SMC4-213ENST00000472282 PCDH10Q9P2E7 1040 aa14.2□□□□□ -0.14
SMC4-213ENST00000472282 ABCC5O15440 1437 aa14.2□□□□□ -0.14
SMC4-213ENST00000472282 ABCC3O15438 1527 aa14.2□□□□□ -0.14
SMC4-213ENST00000472282 A2ML1A8K2U0 1454 aa14.19□□□□□ -0.14
SMC4-213ENST00000472282 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
SMC4-213ENST00000472282 NCKAP5LQ9HCH0 1330 aa14.19□□□□□ -0.14
SMC4-213ENST00000472282 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
SMC4-213ENST00000472282 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
SMC4-213ENST00000472282 FKBP8Q14318 412 aa14.18□□□□□ -0.14
SMC4-213ENST00000472282 DUOX2Q9NRD8 1548 aa14.18□□□□□ -0.14
SMC4-213ENST00000472282 SHANK2Q9UPX8 1470 aa14.18□□□□□ -0.14
SMC4-213ENST00000472282 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
SMC4-213ENST00000472282 DAPK1P53355 1430 aa14.17□□□□□ -0.14
SMC4-213ENST00000472282 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
SMC4-213ENST00000472282 NEURL4Q96JN8 1562 aa14.17□□□□□ -0.14
SMC4-213ENST00000472282 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
SMC4-213ENST00000472282 TNRQ92752 1358 aa14.16□□□□□ -0.14
SMC4-213ENST00000472282 DEPDC5O75140 1603 aa14.15□□□□□ -0.14
SMC4-213ENST00000472282 SPATA31D1Q6ZQQ2 1576 aa14.15□□□□□ -0.14
SMC4-213ENST00000472282 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
SMC4-213ENST00000472282 MS4A3Q96HJ5 214 aa14.14□□□□□ -0.15
SMC4-213ENST00000472282 PRDM15P57071 1507 aaPredicted RBP14.14□□□□□ -0.15
SMC4-213ENST00000472282 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
SMC4-213ENST00000472282 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
SMC4-213ENST00000472282 UBR1Q8IWV7 1749 aa14.12□□□□□ -0.15
SMC4-213ENST00000472282 ZNF335Q9H4Z2 1342 aaPredicted RBP14.12□□□□□ -0.15
SMC4-213ENST00000472282 ERVK-7P63135 1459 aa14.12□□□□□ -0.15
SMC4-213ENST00000472282 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
SMC4-213ENST00000472282 ERBINQ96RT1 1412 aa14.11□□□□□ -0.15
SMC4-213ENST00000472282 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
SMC4-213ENST00000472282 UGGT1Q9NYU2 1555 aa14.11□□□□□ -0.15
SMC4-213ENST00000472282 PKD2Q13563 968 aa14.1□□□□□ -0.15
SMC4-213ENST00000472282 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
SMC4-213ENST00000472282 CHIC2Q9UKJ5 165 aa14.09□□□□□ -0.15
SMC4-213ENST00000472282 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.09□□□□□ -0.153e-9■■■■■ 72.1
SMC4-213ENST00000472282 STRCP1A6NGW2 1772 aa14.07□□□□□ -0.16
SMC4-213ENST00000472282 VWDEQ8N2E2 1590 aa14.07□□□□□ -0.16
SMC4-213ENST00000472282 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
SMC4-213ENST00000472282 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
SMC4-213ENST00000472282 IQSEC2Q5JU85 1478 aa14.06□□□□□ -0.16
SMC4-213ENST00000472282 PIK3C2BO00750 1634 aa14.06□□□□□ -0.16
SMC4-213ENST00000472282 ASTLQ6HA08 431 aaPredicted RBP14.06□□□□□ -0.16
SMC4-213ENST00000472282 KIF12Q96FN5 646 aa14.05□□□□□ -0.16
SMC4-213ENST00000472282 ANKRD30AQ9BXX3 1397 aa14.05□□□□□ -0.16
SMC4-213ENST00000472282 FAM50AQ14320 339 aaKnown RBP14.04□□□□□ -0.16
SMC4-213ENST00000472282 RASEFQ8IZ41 740 aa14.04□□□□□ -0.16
SMC4-213ENST00000472282 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
SMC4-213ENST00000472282 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
SMC4-213ENST00000472282 MED14O60244 1454 aa14.03□□□□□ -0.16
SMC4-213ENST00000472282 SYNMO15061 1565 aa14.03□□□□□ -0.16
SMC4-213ENST00000472282 MYO5BQ9ULV0 1848 aa14.02□□□□□ -0.16
SMC4-213ENST00000472282 LMTK2Q8IWU2 1503 aa14.02□□□□□ -0.16
SMC4-213ENST00000472282 NPHP4O75161 1426 aaPredicted RBP14.02□□□□□ -0.16
SMC4-213ENST00000472282 ATMINO43313 823 aaPredicted RBP14.02□□□□□ -0.17
SMC4-213ENST00000472282 THEMISQ8N1K5 641 aaPredicted RBP14.02□□□□□ -0.17
SMC4-213ENST00000472282 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
SMC4-213ENST00000472282 EFCAB6Q5THR3 1501 aa14.01□□□□□ -0.17
SMC4-213ENST00000472282 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
SMC4-213ENST00000472282 C7P10643 843 aa14□□□□□ -0.17
SMC4-213ENST00000472282 ANKLE2Q86XL3 938 aa14□□□□□ -0.17
SMC4-213ENST00000472282 KDM5AP29375 1690 aaKnown RBP13.99□□□□□ -0.17
SMC4-213ENST00000472282 GCC2Q8IWJ2 1684 aa13.99□□□□□ -0.17
SMC4-213ENST00000472282 FAM163AQ96GL9 167 aaPredicted RBP13.99□□□□□ -0.17
SMC4-213ENST00000472282 UNC13BO14795 1591 aa13.99□□□□□ -0.17
SMC4-213ENST00000472282 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
SMC4-213ENST00000472282 TET3O43151 1660 aa13.98□□□□□ -0.17
SMC4-213ENST00000472282 SLIT1O75093 1534 aa13.98□□□□□ -0.17
SMC4-213ENST00000472282 CPS1P31327 1500 aa13.98□□□□□ -0.17
SMC4-213ENST00000472282 ANKRD50Q9ULJ7 1429 aa13.98□□□□□ -0.17
SMC4-213ENST00000472282 KANK1Q14678 1352 aa13.97□□□□□ -0.17
SMC4-213ENST00000472282 XIRP1Q702N8 1843 aaKnown RBP13.97□□□□□ -0.17
SMC4-213ENST00000472282 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
SMC4-213ENST00000472282 E9PCH4 1651 aa13.96□□□□□ -0.17
SMC4-213ENST00000472282 SCAF11Q99590 1463 aaKnown RBP13.96□□□□□ -0.17
SMC4-213ENST00000472282 MAP3K13O43283 966 aa13.96□□□□□ -0.17
SMC4-213ENST00000472282 LTKP29376 864 aa13.95□□□□□ -0.18
SMC4-213ENST00000472282 NOS1P29475 1434 aa13.95□□□□□ -0.18
SMC4-213ENST00000472282 RRBP1Q9P2E9 1410 aaKnown RBP13.95□□□□□ -0.18
SMC4-213ENST00000472282 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
SMC4-213ENST00000472282 FAM212AQ96EL1 285 aa13.94□□□□□ -0.18
SMC4-213ENST00000472282 IDI1Q13907 227 aa13.93□□□□□ -0.18
SMC4-213ENST00000472282 ADGRB3O60242 1522 aa13.93□□□□□ -0.18
SMC4-213ENST00000472282 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
SMC4-213ENST00000472282 TIE1P35590 1138 aa13.92□□□□□ -0.18
SMC4-213ENST00000472282 NUBP1P53384 320 aa13.92□□□□□ -0.18
SMC4-213ENST00000472282 SGIP1Q9BQI5 828 aa13.92□□□□□ -0.18
SMC4-213ENST00000472282 LRRC7Q96NW7 1537 aa13.91□□□□□ -0.18
SMC4-213ENST00000472282 TXNDC2Q86VQ3 553 aa13.91□□□□□ -0.18
SMC4-213ENST00000472282 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
SMC4-213ENST00000472282 ITGAEP38570 1179 aa13.9□□□□□ -0.18
SMC4-213ENST00000472282 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
SMC4-213ENST00000472282 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
SMC4-213ENST00000472282 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
SMC4-213ENST00000472282 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.19
SMC4-213ENST00000472282 MAMSTRQ6ZN01 415 aa13.89□□□□□ -0.19
SMC4-213ENST00000472282 BMP2KQ9NSY1 1161 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms