RNA–Protein interactions for RNA: ENST00000471868.1

SUPT20H-209, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-209ENST00000471868 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
SUPT20H-209ENST00000471868 CLIP1P30622 1438 aa8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 CUX2O14529 1486 aa8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 RAPGEF2Q9Y4G8 1499 aa8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 MLLT3P42568 568 aaPredicted RBP8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 NYAP1Q6ZVC0 841 aa8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
SUPT20H-209ENST00000471868 PCGF6Q9BYE7 350 aa8.02□□□□□ -1.13
SUPT20H-209ENST00000471868 KDM2AQ9Y2K7 1162 aa8.02□□□□□ -1.13
SUPT20H-209ENST00000471868 VPS8Q8N3P4 1428 aa8.02□□□□□ -1.13
SUPT20H-209ENST00000471868 CARMIL1Q5VZK9 1371 aa8.01□□□□□ -1.13
SUPT20H-209ENST00000471868 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
SUPT20H-209ENST00000471868 CUL7Q14999 1698 aa8□□□□□ -1.13
SUPT20H-209ENST00000471868 LAPTM4BQ86VI4 370 aa8□□□□□ -1.13
SUPT20H-209ENST00000471868 ANKK1Q8NFD2 765 aa8□□□□□ -1.13
SUPT20H-209ENST00000471868 CDHR5Q9HBB8 845 aa8□□□□□ -1.13
SUPT20H-209ENST00000471868 KIAA1468Q9P260 1216 aa8□□□□□ -1.13
SUPT20H-209ENST00000471868 SEMA3EO15041 775 aa7.99□□□□□ -1.13
SUPT20H-209ENST00000471868 TRAF7Q6Q0C0 670 aa7.99□□□□□ -1.13
SUPT20H-209ENST00000471868 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
SUPT20H-209ENST00000471868 MRC2Q9UBG0 1479 aa7.99□□□□□ -1.13
SUPT20H-209ENST00000471868 HRCP23327 699 aa7.98□□□□□ -1.13
SUPT20H-209ENST00000471868 PRSS12P56730 875 aa7.98□□□□□ -1.13
SUPT20H-209ENST00000471868 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
SUPT20H-209ENST00000471868 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
SUPT20H-209ENST00000471868 TSKSQ9UJT2 592 aa7.98□□□□□ -1.13
SUPT20H-209ENST00000471868 NESP48681 1621 aa7.98□□□□□ -1.13
SUPT20H-209ENST00000471868 LCE2BO14633 110 aa7.97□□□□□ -1.13
SUPT20H-209ENST00000471868 KCNC4Q03721 635 aa7.97□□□□□ -1.13
SUPT20H-209ENST00000471868 URB2Q14146 1524 aaKnown RBP7.97□□□□□ -1.13
SUPT20H-209ENST00000471868 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.14
SUPT20H-209ENST00000471868 FAM98CQ17RN3 349 aaKnown RBP7.96□□□□□ -1.14
SUPT20H-209ENST00000471868 SMYD5Q6GMV2 418 aa7.96□□□□□ -1.14
SUPT20H-209ENST00000471868 MAP3K1Q13233 1512 aa7.96□□□□□ -1.14
SUPT20H-209ENST00000471868 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
SUPT20H-209ENST00000471868 TESPA1A2RU30 521 aaPredicted RBP7.95□□□□□ -1.14
SUPT20H-209ENST00000471868 NBPF26B4DH59 902 aa7.95□□□□□ -1.14
SUPT20H-209ENST00000471868 SEPT9Q9UHD8 586 aaPredicted RBP7.95□□□□□ -1.14
SUPT20H-209ENST00000471868 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
SUPT20H-209ENST00000471868 IFT140Q96RY7 1462 aa7.94□□□□□ -1.14
SUPT20H-209ENST00000471868 EFCAB5A4FU69 1503 aa7.94□□□□□ -1.14
SUPT20H-209ENST00000471868 GFRA3O60609 400 aa7.94□□□□□ -1.14
SUPT20H-209ENST00000471868 ZFRQ96KR1 1074 aaKnown RBP7.94□□□□□ -1.14
SUPT20H-209ENST00000471868 WDR62O43379 1518 aa7.93□□□□□ -1.14
SUPT20H-209ENST00000471868 NPDC1Q9NQX5 325 aaPredicted RBP7.93□□□□□ -1.14
SUPT20H-209ENST00000471868 ABCA5Q8WWZ7 1642 aa7.92□□□□□ -1.14
SUPT20H-209ENST00000471868 BCAMP50895 628 aa7.92□□□□□ -1.14
SUPT20H-209ENST00000471868 PTGDRQ13258 359 aa7.92□□□□□ -1.14
SUPT20H-209ENST00000471868 PADI6Q6TGC4 694 aa7.92□□□□□ -1.14
SUPT20H-209ENST00000471868 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
SUPT20H-209ENST00000471868 NUTM2FA1L443 756 aa7.91□□□□□ -1.14
SUPT20H-209ENST00000471868 TTC13Q8NBP0 860 aa7.91□□□□□ -1.14
SUPT20H-209ENST00000471868 PNMA3Q9UL41 463 aa7.91□□□□□ -1.14
SUPT20H-209ENST00000471868 AQRO60306 1485 aaKnown RBP eCLIP7.91□□□□□ -1.148e-6■■■■□ 23.2
SUPT20H-209ENST00000471868 TARBP1Q13395 1621 aaKnown RBP7.9□□□□□ -1.14
SUPT20H-209ENST00000471868 GRIN2BQ13224 1484 aa7.9□□□□□ -1.14
SUPT20H-209ENST00000471868 RAD54L2Q9Y4B4 1467 aa7.9□□□□□ -1.14
SUPT20H-209ENST00000471868 TATDN2Q93075 761 aa7.9□□□□□ -1.14
SUPT20H-209ENST00000471868 LRCH3Q96II8 777 aa7.9□□□□□ -1.14
SUPT20H-209ENST00000471868 WBP1LQ9NX94 342 aa7.9□□□□□ -1.14
SUPT20H-209ENST00000471868 FMN1Q68DA7 1419 aa7.89□□□□□ -1.15
SUPT20H-209ENST00000471868 SMAPO00193 183 aa7.89□□□□□ -1.15
SUPT20H-209ENST00000471868 NRG2O14511 850 aaPredicted RBP7.89□□□□□ -1.15
SUPT20H-209ENST00000471868 FCHSD2O94868 740 aa7.89□□□□□ -1.15
SUPT20H-209ENST00000471868 KIF21AQ7Z4S6 1674 aa7.89□□□□□ -1.15
SUPT20H-209ENST00000471868 ARAP1Q96P48 1450 aa7.88□□□□□ -1.15
SUPT20H-209ENST00000471868 ARHGAP35Q9NRY4 1499 aa7.88□□□□□ -1.15
SUPT20H-209ENST00000471868 NUDT18Q6ZVK8 323 aa7.88□□□□□ -1.15
SUPT20H-209ENST00000471868 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.88□□□□□ -1.15
SUPT20H-209ENST00000471868 TULP1O00294 542 aaPredicted RBP7.87□□□□□ -1.15
SUPT20H-209ENST00000471868 RBM26Q5T8P6 1007 aaKnown RBP7.87□□□□□ -1.15
SUPT20H-209ENST00000471868 ERCC6Q03468 1493 aa7.87□□□□□ -1.15
SUPT20H-209ENST00000471868 TDRD9Q8NDG6 1382 aaKnown RBP7.85□□□□□ -1.15
SUPT20H-209ENST00000471868 C3orf80F5H4A9 247 aa7.85□□□□□ -1.15
SUPT20H-209ENST00000471868 HIC1Q14526 733 aa7.85□□□□□ -1.15
SUPT20H-209ENST00000471868 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
SUPT20H-209ENST00000471868 MAGI1Q96QZ7 1491 aaPredicted RBP7.84□□□□□ -1.15
SUPT20H-209ENST00000471868 FYCO1Q9BQS8 1478 aa7.84□□□□□ -1.15
SUPT20H-209ENST00000471868 HDGFP51858 240 aaKnown RBP7.84□□□□□ -1.15
SUPT20H-209ENST00000471868 SAMD7Q7Z3H4 446 aa7.84□□□□□ -1.15
SUPT20H-209ENST00000471868 HPS5Q9UPZ3 1129 aa7.84□□□□□ -1.15
SUPT20H-209ENST00000471868 CASKIN1Q8WXD9 1431 aa7.84□□□□□ -1.15
SUPT20H-209ENST00000471868 CLSPNQ9HAW4 1339 aa7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 ACIN1Q9UKV3 1341 aaKnown RBP7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 GPIHBP1Q8IV16 184 aa7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 RBM46Q8TBY0 533 aaKnown RBP7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 V9GY48 417 aaPredicted RBP7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 THOC2Q8NI27 1593 aaKnown RBP7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 CTTNBP2Q8WZ74 1663 aa7.83□□□□□ -1.16
SUPT20H-209ENST00000471868 ZNF787Q6DD87 383 aa7.82□□□□□ -1.16
SUPT20H-209ENST00000471868 EYA1Q99502 592 aa7.82□□□□□ -1.16
SUPT20H-209ENST00000471868 ADGRG1Q9Y653 693 aa7.82□□□□□ -1.16
SUPT20H-209ENST00000471868 RRBP1Q9P2E9 1410 aaKnown RBP7.81□□□□□ -1.16
SUPT20H-209ENST00000471868 GNPATO15228 680 aa7.81□□□□□ -1.16
SUPT20H-209ENST00000471868 GPR37O15354 613 aa7.81□□□□□ -1.16
SUPT20H-209ENST00000471868 SLC4A3P48751 1232 aa7.81□□□□□ -1.16
SUPT20H-209ENST00000471868 NECTIN2Q92692 538 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms