RNA–Protein interactions for RNA: ENST00000471868.1

SUPT20H-209, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-209ENST00000471868 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
SUPT20H-209ENST00000471868 CHIC1Q5VXU3 224 aa19.31■□□□□ 0.68
SUPT20H-209ENST00000471868 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
SUPT20H-209ENST00000471868 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
SUPT20H-209ENST00000471868 FOXD1Q16676 465 aa16.52■□□□□ 0.24
SUPT20H-209ENST00000471868 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
SUPT20H-209ENST00000471868 MSH5O43196 834 aa15.71■□□□□ 0.11
SUPT20H-209ENST00000471868 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
SUPT20H-209ENST00000471868 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
SUPT20H-209ENST00000471868 PPP6R1Q9UPN7 881 aa15.06■□□□□ 0
SUPT20H-209ENST00000471868 ADRA2BP18089 450 aa14.97□□□□□ -0.01
SUPT20H-209ENST00000471868 DMRT2Q9Y5R5 561 aa13.97□□□□□ -0.17
SUPT20H-209ENST00000471868 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
SUPT20H-209ENST00000471868 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
SUPT20H-209ENST00000471868 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
SUPT20H-209ENST00000471868 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
SUPT20H-209ENST00000471868 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
SUPT20H-209ENST00000471868 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
SUPT20H-209ENST00000471868 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
SUPT20H-209ENST00000471868 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
SUPT20H-209ENST00000471868 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
SUPT20H-209ENST00000471868 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
SUPT20H-209ENST00000471868 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
SUPT20H-209ENST00000471868 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
SUPT20H-209ENST00000471868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.61□□□□□ -0.39
SUPT20H-209ENST00000471868 KCNA4P22459 653 aa12.51□□□□□ -0.41
SUPT20H-209ENST00000471868 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
SUPT20H-209ENST00000471868 POTEHQ6S545 545 aa12.5□□□□□ -0.41
SUPT20H-209ENST00000471868 DSG3P32926 999 aa12.31□□□□□ -0.44
SUPT20H-209ENST00000471868 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
SUPT20H-209ENST00000471868 CAPN15O75808 1086 aa12.23□□□□□ -0.45
SUPT20H-209ENST00000471868 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
SUPT20H-209ENST00000471868 APLP2Q06481 763 aa11.99□□□□□ -0.49
SUPT20H-209ENST00000471868 ZNF219Q9P2Y4 722 aaPredicted RBP11.95□□□□□ -0.5
SUPT20H-209ENST00000471868 TRHP20396 242 aaPredicted RBP11.91□□□□□ -0.5
SUPT20H-209ENST00000471868 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
SUPT20H-209ENST00000471868 SLC4A2P04920 1241 aa11.89□□□□□ -0.51
SUPT20H-209ENST00000471868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
SUPT20H-209ENST00000471868 ABCB7O75027 752 aa11.87□□□□□ -0.51
SUPT20H-209ENST00000471868 HNRNPUL2Q1KMD3 747 aaKnown RBP11.87□□□□□ -0.51
SUPT20H-209ENST00000471868 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
SUPT20H-209ENST00000471868 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
SUPT20H-209ENST00000471868 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
SUPT20H-209ENST00000471868 FOXD4L1Q9NU39 408 aa11.63□□□□□ -0.55
SUPT20H-209ENST00000471868 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
SUPT20H-209ENST00000471868 POLA2Q14181 598 aa11.52□□□□□ -0.57
SUPT20H-209ENST00000471868 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
SUPT20H-209ENST00000471868 ZBTB22O15209 634 aa11.49□□□□□ -0.57
SUPT20H-209ENST00000471868 AKT1S1Q96B36 256 aa11.42□□□□□ -0.58
SUPT20H-209ENST00000471868 NISCHQ9Y2I1 1504 aa11.38□□□□□ -0.59
SUPT20H-209ENST00000471868 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
SUPT20H-209ENST00000471868 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
SUPT20H-209ENST00000471868 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
SUPT20H-209ENST00000471868 EHMT2Q96KQ7 1210 aa11.28□□□□□ -0.6
SUPT20H-209ENST00000471868 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
SUPT20H-209ENST00000471868 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
SUPT20H-209ENST00000471868 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
SUPT20H-209ENST00000471868 HAX1O00165 279 aa11.21□□□□□ -0.61
SUPT20H-209ENST00000471868 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
SUPT20H-209ENST00000471868 PITPNM1O00562 1244 aa11.15□□□□□ -0.62
SUPT20H-209ENST00000471868 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
SUPT20H-209ENST00000471868 EVX2Q03828 476 aa11□□□□□ -0.65
SUPT20H-209ENST00000471868 SPDYE2BA6NHP3 402 aa10.92□□□□□ -0.66
SUPT20H-209ENST00000471868 SPDYE6P0CI01 402 aa10.92□□□□□ -0.66
SUPT20H-209ENST00000471868 SPDYE2Q495Y8 402 aa10.92□□□□□ -0.66
SUPT20H-209ENST00000471868 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
SUPT20H-209ENST00000471868 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
SUPT20H-209ENST00000471868 FBLN2P98095 1184 aa10.84□□□□□ -0.67
SUPT20H-209ENST00000471868 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
SUPT20H-209ENST00000471868 LHX8Q68G74 356 aa10.78□□□□□ -0.68
SUPT20H-209ENST00000471868 GABBR2O75899 941 aa10.77□□□□□ -0.69
SUPT20H-209ENST00000471868 CLEC11AQ9Y240 323 aa10.76□□□□□ -0.69
SUPT20H-209ENST00000471868 MKRN4PQ13434 485 aaPredicted RBP10.73□□□□□ -0.69
SUPT20H-209ENST00000471868 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
SUPT20H-209ENST00000471868 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
SUPT20H-209ENST00000471868 CLCN6P51797 869 aa10.58□□□□□ -0.72
SUPT20H-209ENST00000471868 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
SUPT20H-209ENST00000471868 PRR29P0C7W0 189 aa10.56□□□□□ -0.72
SUPT20H-209ENST00000471868 POTEIP0CG38 1075 aa10.52□□□□□ -0.73
SUPT20H-209ENST00000471868 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
SUPT20H-209ENST00000471868 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
SUPT20H-209ENST00000471868 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
SUPT20H-209ENST00000471868 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
SUPT20H-209ENST00000471868 PLSCR2Q9NRY7 297 aa10.4□□□□□ -0.74
SUPT20H-209ENST00000471868 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
SUPT20H-209ENST00000471868 ZNF579Q8NAF0 562 aaKnown RBP10.34□□□□□ -0.75
SUPT20H-209ENST00000471868 ZRANB1Q9UGI0 708 aa10.26□□□□□ -0.77
SUPT20H-209ENST00000471868 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
SUPT20H-209ENST00000471868 PROM2Q8N271 834 aa10.22□□□□□ -0.77
SUPT20H-209ENST00000471868 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
SUPT20H-209ENST00000471868 FKBP8Q14318 412 aa10.21□□□□□ -0.77
SUPT20H-209ENST00000471868 GALR2O43603 387 aaPredicted RBP10.18□□□□□ -0.78
SUPT20H-209ENST00000471868 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
SUPT20H-209ENST00000471868 POTEMA6NI47 508 aa10.15□□□□□ -0.78
SUPT20H-209ENST00000471868 POTEB2H3BUK9 544 aa10.15□□□□□ -0.78
SUPT20H-209ENST00000471868 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
SUPT20H-209ENST00000471868 PAK3O75914 559 aaPredicted RBP10.12□□□□□ -0.79
SUPT20H-209ENST00000471868 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
SUPT20H-209ENST00000471868 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
SUPT20H-209ENST00000471868 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms