RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 VPS8Q8N3P4 1428 aa9.71□□□□□ -0.85
CHD6-206ENST00000470470 PPARGC1BQ86YN6 1023 aaKnown RBP9.71□□□□□ -0.86
CHD6-206ENST00000470470 HPS5Q9UPZ3 1129 aa9.7□□□□□ -0.86
CHD6-206ENST00000470470 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
CHD6-206ENST00000470470 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
CHD6-206ENST00000470470 PACS2Q86VP3 889 aa9.68□□□□□ -0.86
CHD6-206ENST00000470470 DDX12PQ92771 950 aa9.67□□□□□ -0.86
CHD6-206ENST00000470470 PDIA6Q15084 440 aa9.66□□□□□ -0.86
CHD6-206ENST00000470470 ZNF787Q6DD87 383 aa9.66□□□□□ -0.86
CHD6-206ENST00000470470 NBR1Q14596 966 aa9.65□□□□□ -0.86
CHD6-206ENST00000470470 PRKD2Q9BZL6 878 aa9.65□□□□□ -0.86
CHD6-206ENST00000470470 TSKSQ9UJT2 592 aa9.65□□□□□ -0.86
CHD6-206ENST00000470470 MAP3K7O43318 606 aa9.64□□□□□ -0.87
CHD6-206ENST00000470470 KDM2AQ9Y2K7 1162 aa9.64□□□□□ -0.87
CHD6-206ENST00000470470 LAMC3Q9Y6N6 1575 aa9.64□□□□□ -0.87
CHD6-206ENST00000470470 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
CHD6-206ENST00000470470 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
CHD6-206ENST00000470470 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
CHD6-206ENST00000470470 IGF1RP08069 1367 aa9.63□□□□□ -0.87
CHD6-206ENST00000470470 PPP4CP60510 307 aa9.62□□□□□ -0.87
CHD6-206ENST00000470470 CERKQ8TCT0 537 aa9.62□□□□□ -0.87
CHD6-206ENST00000470470 V9GY48 417 aaPredicted RBP9.62□□□□□ -0.87
CHD6-206ENST00000470470 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
CHD6-206ENST00000470470 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
CHD6-206ENST00000470470 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
CHD6-206ENST00000470470 ARAP1Q96P48 1450 aa9.61□□□□□ -0.87
CHD6-206ENST00000470470 ZNF775Q96BV0 537 aaPredicted RBP9.6□□□□□ -0.87
CHD6-206ENST00000470470 CUX2O14529 1486 aa9.6□□□□□ -0.87
CHD6-206ENST00000470470 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
CHD6-206ENST00000470470 PRSS12P56730 875 aa9.58□□□□□ -0.88
CHD6-206ENST00000470470 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
CHD6-206ENST00000470470 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
CHD6-206ENST00000470470 BCANQ96GW7 911 aa9.58□□□□□ -0.88
CHD6-206ENST00000470470 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
CHD6-206ENST00000470470 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
CHD6-206ENST00000470470 MAP3K1Q13233 1512 aa9.57□□□□□ -0.88
CHD6-206ENST00000470470 TOPBP1Q92547 1522 aa9.57□□□□□ -0.88
CHD6-206ENST00000470470 CARMIL1Q5VZK9 1371 aa9.57□□□□□ -0.88
CHD6-206ENST00000470470 IL21Q9HBE4 155 aa9.56□□□□□ -0.88
CHD6-206ENST00000470470 ARHGAP35Q9NRY4 1499 aa9.56□□□□□ -0.88
CHD6-206ENST00000470470 CCER1Q8TC90 406 aaPredicted RBP9.56□□□□□ -0.88
CHD6-206ENST00000470470 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
CHD6-206ENST00000470470 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
CHD6-206ENST00000470470 MTRQ99707 1265 aa9.55□□□□□ -0.88
CHD6-206ENST00000470470 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
CHD6-206ENST00000470470 CUL7Q14999 1698 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 WDR97A6NE52 1622 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 SMAPO00193 183 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 TATDN2Q93075 761 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 FAM198AQ9UFP1 575 aa9.54□□□□□ -0.88
CHD6-206ENST00000470470 POLA1P09884 1462 aaPredicted RBP9.53□□□□□ -0.88
CHD6-206ENST00000470470 NECTIN2Q92692 538 aa9.53□□□□□ -0.88
CHD6-206ENST00000470470 PNMA3Q9UL41 463 aa9.53□□□□□ -0.88
CHD6-206ENST00000470470 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.89
CHD6-206ENST00000470470 NESP48681 1621 aa9.52□□□□□ -0.89
CHD6-206ENST00000470470 HDGFP51858 240 aaKnown RBP9.51□□□□□ -0.89
CHD6-206ENST00000470470 E2F4Q16254 413 aa9.51□□□□□ -0.89
CHD6-206ENST00000470470 URB2Q14146 1524 aaKnown RBP9.5□□□□□ -0.89
CHD6-206ENST00000470470 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
CHD6-206ENST00000470470 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
CHD6-206ENST00000470470 EFCAB5A4FU69 1503 aa9.49□□□□□ -0.89
CHD6-206ENST00000470470 ABCA5Q8WWZ7 1642 aa9.48□□□□□ -0.89
CHD6-206ENST00000470470 RAD54L2Q9Y4B4 1467 aa9.48□□□□□ -0.89
CHD6-206ENST00000470470 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
CHD6-206ENST00000470470 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
CHD6-206ENST00000470470 CTTNBP2Q8WZ74 1663 aa9.48□□□□□ -0.89
CHD6-206ENST00000470470 CLSPNQ9HAW4 1339 aa9.47□□□□□ -0.89
CHD6-206ENST00000470470 FHAD1B1AJZ9 1412 aa9.47□□□□□ -0.89
CHD6-206ENST00000470470 GRXCR2A6NFK2 248 aa9.47□□□□□ -0.89
CHD6-206ENST00000470470 TTBK1Q5TCY1 1321 aaPredicted RBP9.46□□□□□ -0.89
CHD6-206ENST00000470470 RNF40O75150 1001 aa9.46□□□□□ -0.9
CHD6-206ENST00000470470 APLP1P51693 650 aa9.46□□□□□ -0.9
CHD6-206ENST00000470470 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
CHD6-206ENST00000470470 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.9
CHD6-206ENST00000470470 TIAM1Q13009 1591 aa9.46□□□□□ -0.9
CHD6-206ENST00000470470 OSBPP22059 807 aa9.45□□□□□ -0.9
CHD6-206ENST00000470470 GGCXP38435 758 aa9.45□□□□□ -0.9
CHD6-206ENST00000470470 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
CHD6-206ENST00000470470 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
CHD6-206ENST00000470470 CDHR5Q9HBB8 845 aa9.45□□□□□ -0.9
CHD6-206ENST00000470470 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
CHD6-206ENST00000470470 CFAP43Q8NDM7 1665 aa9.44□□□□□ -0.9
CHD6-206ENST00000470470 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
CHD6-206ENST00000470470 TARBP1Q13395 1621 aaKnown RBP9.44□□□□□ -0.9
CHD6-206ENST00000470470 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
CHD6-206ENST00000470470 RANGAP1P46060 587 aaPredicted RBP9.42□□□□□ -0.9
CHD6-206ENST00000470470 TMUB1Q9BVT8 246 aa9.42□□□□□ -0.9
CHD6-206ENST00000470470 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
CHD6-206ENST00000470470 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
CHD6-206ENST00000470470 LRRC9Q6ZRR7 1453 aa9.41□□□□□ -0.9
CHD6-206ENST00000470470 FYCO1Q9BQS8 1478 aa9.41□□□□□ -0.9
CHD6-206ENST00000470470 CASKIN1Q8WXD9 1431 aa9.4□□□□□ -0.9
CHD6-206ENST00000470470 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
CHD6-206ENST00000470470 CCNB3Q8WWL7 1395 aa9.4□□□□□ -0.91
CHD6-206ENST00000470470 SAMD9Q5K651 1589 aa9.39□□□□□ -0.91
CHD6-206ENST00000470470 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
CHD6-206ENST00000470470 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
CHD6-206ENST00000470470 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms