RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
CHD6-206ENST00000470470 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
CHD6-206ENST00000470470 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
CHD6-206ENST00000470470 PHF23Q9BUL5 403 aaPredicted RBP21.41■■□□□ 1.02
CHD6-206ENST00000470470 FOXD1Q16676 465 aa20.37■□□□□ 0.85
CHD6-206ENST00000470470 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
CHD6-206ENST00000470470 MSH5O43196 834 aa19.33■□□□□ 0.69
CHD6-206ENST00000470470 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
CHD6-206ENST00000470470 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
CHD6-206ENST00000470470 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
CHD6-206ENST00000470470 ADRA2BP18089 450 aa18.48■□□□□ 0.55
CHD6-206ENST00000470470 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.34
CHD6-206ENST00000470470 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
CHD6-206ENST00000470470 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
CHD6-206ENST00000470470 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
CHD6-206ENST00000470470 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
CHD6-206ENST00000470470 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
CHD6-206ENST00000470470 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
CHD6-206ENST00000470470 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
CHD6-206ENST00000470470 C1QBPQ07021 282 aaKnown RBP16.17■□□□□ 0.18
CHD6-206ENST00000470470 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
CHD6-206ENST00000470470 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
CHD6-206ENST00000470470 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
CHD6-206ENST00000470470 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
CHD6-206ENST00000470470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■□□ 16
CHD6-206ENST00000470470 POTEHQ6S545 545 aa15.43■□□□□ 0.06
CHD6-206ENST00000470470 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
CHD6-206ENST00000470470 DSG3P32926 999 aa15.17■□□□□ 0.02
CHD6-206ENST00000470470 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
CHD6-206ENST00000470470 CAPN15O75808 1086 aa15.11■□□□□ 0.01
CHD6-206ENST00000470470 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
CHD6-206ENST00000470470 KCNA4P22459 653 aa14.88□□□□□ -0.03
CHD6-206ENST00000470470 APLP2Q06481 763 aa14.73□□□□□ -0.05
CHD6-206ENST00000470470 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
CHD6-206ENST00000470470 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
CHD6-206ENST00000470470 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
CHD6-206ENST00000470470 ABCB7O75027 752 aa14.68□□□□□ -0.06
CHD6-206ENST00000470470 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
CHD6-206ENST00000470470 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
CHD6-206ENST00000470470 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
CHD6-206ENST00000470470 SAMD1Q6SPF0 538 aaPredicted RBP14.49□□□□□ -0.09
CHD6-206ENST00000470470 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
CHD6-206ENST00000470470 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
CHD6-206ENST00000470470 POLA2Q14181 598 aa14.19□□□□□ -0.14
CHD6-206ENST00000470470 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
CHD6-206ENST00000470470 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
CHD6-206ENST00000470470 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
CHD6-206ENST00000470470 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
CHD6-206ENST00000470470 PIP4P2Q8N4L2 257 aa13.93□□□□□ -0.18
CHD6-206ENST00000470470 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
CHD6-206ENST00000470470 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
CHD6-206ENST00000470470 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
CHD6-206ENST00000470470 HAX1O00165 279 aa13.83□□□□□ -0.2
CHD6-206ENST00000470470 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.21e-6■■■□□ 16.5
CHD6-206ENST00000470470 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
CHD6-206ENST00000470470 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
CHD6-206ENST00000470470 ZBTB22O15209 634 aa13.65□□□□□ -0.22
CHD6-206ENST00000470470 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
CHD6-206ENST00000470470 NISCHQ9Y2I1 1504 aa13.6□□□□□ -0.23
CHD6-206ENST00000470470 EVX2Q03828 476 aa13.59□□□□□ -0.23
CHD6-206ENST00000470470 FBLN2P98095 1184 aa13.43□□□□□ -0.26
CHD6-206ENST00000470470 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
CHD6-206ENST00000470470 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
CHD6-206ENST00000470470 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
CHD6-206ENST00000470470 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
CHD6-206ENST00000470470 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
CHD6-206ENST00000470470 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
CHD6-206ENST00000470470 LHX8Q68G74 356 aa13.29□□□□□ -0.28
CHD6-206ENST00000470470 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
CHD6-206ENST00000470470 GABBR2O75899 941 aa13.27□□□□□ -0.29
CHD6-206ENST00000470470 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
CHD6-206ENST00000470470 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
CHD6-206ENST00000470470 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
CHD6-206ENST00000470470 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
CHD6-206ENST00000470470 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
CHD6-206ENST00000470470 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
CHD6-206ENST00000470470 POTEIP0CG38 1075 aa12.98□□□□□ -0.33
CHD6-206ENST00000470470 PABPN1Q86U42 306 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHD6-206ENST00000470470 CLCN6P51797 869 aa12.95□□□□□ -0.34
CHD6-206ENST00000470470 CD44P16070 742 aaKnown RBP12.94□□□□□ -0.34
CHD6-206ENST00000470470 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
CHD6-206ENST00000470470 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
CHD6-206ENST00000470470 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
CHD6-206ENST00000470470 DCBLD2Q96PD2 775 aa12.81□□□□□ -0.36
CHD6-206ENST00000470470 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
CHD6-206ENST00000470470 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CHD6-206ENST00000470470 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
CHD6-206ENST00000470470 OTUD5Q96G74 571 aa12.62□□□□□ -0.39
CHD6-206ENST00000470470 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
CHD6-206ENST00000470470 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
CHD6-206ENST00000470470 POTEMA6NI47 508 aa12.55□□□□□ -0.4
CHD6-206ENST00000470470 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
CHD6-206ENST00000470470 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
CHD6-206ENST00000470470 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
CHD6-206ENST00000470470 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
CHD6-206ENST00000470470 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
CHD6-206ENST00000470470 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
CHD6-206ENST00000470470 PELP1Q8IZL8 1130 aaKnown RBP12.38□□□□□ -0.43
CHD6-206ENST00000470470 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHD6-206ENST00000470470 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms