RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 ADGBQ8N7X0 1667 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 ZSCAN30Q86W11 494 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 PLXNC1O60486 1568 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 CDC42BPBQ9Y5S2 1711 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 HSP90AB1P08238 724 aaKnown RBP4.88□□□□□ -1.63
CCNL1-204ENST00000464316 HECW1Q76N89 1606 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 SLC24A1O60721 1099 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 SUPT6HQ7KZ85 1726 aaKnown RBP4.87□□□□□ -1.63
CCNL1-204ENST00000464316 CLUAP1Q96AJ1 413 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 DIP2BQ9P265 1576 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 PREX2Q70Z35 1606 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 TBC1D32Q96NH3 1257 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 TBC1D2Q9BYX2 928 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 FAM13BQ9NYF5 915 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 ZMYM3Q14202 1370 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 PARD3Q8TEW0 1356 aa4.87□□□□□ -1.63
CCNL1-204ENST00000464316 KIAA1107Q9UPP5 1409 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 CAMSAP2Q08AD1 1489 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 TCOF1Q13428 1488 aaKnown RBP4.86□□□□□ -1.63
CCNL1-204ENST00000464316 C20orf194Q5TEA3 1177 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 SKAP1Q86WV1 359 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 TEX14Q8IWB6 1497 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 OFD1O75665 1012 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 TSPY4P0CV99 314 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 TSPY10P0CW01 314 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 NASPP49321 788 aaPredicted RBP4.86□□□□□ -1.63
CCNL1-204ENST00000464316 HS1BP3Q53T59 392 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 DUSP27Q5VZP5 1158 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 SPRYD3Q8NCJ5 442 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 CFAP44Q96MT7 982 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 C22orf23Q9BZE7 217 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 CFDP1Q9UEE9 299 aaPredicted RBP4.86□□□□□ -1.63
CCNL1-204ENST00000464316 GRIN2AQ12879 1464 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 KDM5CP41229 1560 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 KIF14Q15058 1648 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 SMAP1Q8IYB5 467 aaPredicted RBP4.86□□□□□ -1.63
CCNL1-204ENST00000464316 PANK2Q9BZ23 570 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 ADAMTS8Q9UP79 889 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 IFT172Q9UG01 1749 aa4.86□□□□□ -1.63
CCNL1-204ENST00000464316 SLFN5Q08AF3 891 aa4.85□□□□□ -1.63
CCNL1-204ENST00000464316 PANK3Q9H999 370 aa4.85□□□□□ -1.63
CCNL1-204ENST00000464316 ZNF142P52746 1687 aaPredicted RBP4.85□□□□□ -1.63
CCNL1-204ENST00000464316 MCM5P33992 734 aa4.85□□□□□ -1.63
CCNL1-204ENST00000464316 ANTXR1Q9H6X2 564 aa4.85□□□□□ -1.63
CCNL1-204ENST00000464316 RNF17Q9BXT8 1623 aaKnown RBP4.85□□□□□ -1.63
CCNL1-204ENST00000464316 VWDEQ8N2E2 1590 aa4.85□□□□□ -1.63
CCNL1-204ENST00000464316 FER1L4A9Z1Z3 1794 aa4.85□□□□□ -1.63
CCNL1-204ENST00000464316 ABCA6Q8N139 1617 aa4.84□□□□□ -1.63
CCNL1-204ENST00000464316 GRIN2BQ13224 1484 aa4.84□□□□□ -1.63
CCNL1-204ENST00000464316 DYNC1I1O14576 645 aa4.84□□□□□ -1.63
CCNL1-204ENST00000464316 EIF2AK4Q9P2K8 1649 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 PTMAP06454 111 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 MFAP1P55081 439 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 RBM10P98175 930 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 DNTTIP2Q5QJE6 756 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 R3HCC1Q9Y3T6 440 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 DDX49Q9Y6V7 483 aaKnown RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 ZNF608Q9ULD9 1512 aaPredicted RBP4.84□□□□□ -1.63
CCNL1-204ENST00000464316 RALGAPBQ86X10 1494 aa4.84□□□□□ -1.63
CCNL1-204ENST00000464316 UHRF1BP1Q6BDS2 1440 aa4.84□□□□□ -1.64
CCNL1-204ENST00000464316 NUP155O75694 1391 aa4.84□□□□□ -1.64
CCNL1-204ENST00000464316 CHMP4BQ9H444 224 aaKnown RBP4.84□□□□□ -1.64
CCNL1-204ENST00000464316 ZNF777Q9ULD5 760 aaPredicted RBP4.84□□□□□ -1.64
CCNL1-204ENST00000464316 RAPGEF6Q8TEU7 1601 aa4.84□□□□□ -1.64
CCNL1-204ENST00000464316 CFAP74Q9C0B2 1584 aa4.84□□□□□ -1.64
CCNL1-204ENST00000464316 INO80Q9ULG1 1556 aaPredicted RBP4.84□□□□□ -1.64
CCNL1-204ENST00000464316 CCDC144AA2RUR9 1427 aa4.83□□□□□ -1.64
CCNL1-204ENST00000464316 BLMP54132 1417 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-204ENST00000464316 A0A0U1RQG5 324 aaPredicted RBP4.83□□□□□ -1.64
CCNL1-204ENST00000464316 HMGN5P82970 282 aaKnown RBP4.83□□□□□ -1.64
CCNL1-204ENST00000464316 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
CCNL1-204ENST00000464316 COG6Q9Y2V7 657 aa4.83□□□□□ -1.64
CCNL1-204ENST00000464316 DAPK1P53355 1430 aa4.83□□□□□ -1.64
CCNL1-204ENST00000464316 TAF3Q5VWG9 929 aa4.83□□□□□ -1.64
CCNL1-204ENST00000464316 KIAA2012Q0VF49 1180 aa4.83□□□□□ -1.64
CCNL1-204ENST00000464316 NKTRP30414 1462 aaKnown RBP4.82□□□□□ -1.64
CCNL1-204ENST00000464316 WDR7Q9Y4E6 1490 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 PER1O15534 1290 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-204ENST00000464316 PPP1R9BQ96SB3 815 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 CCDC39Q9UFE4 941 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 PDZRN3Q9UPQ7 1066 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 GCC2Q8IWJ2 1684 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 UQCRHLA0A096LP55 91 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 IGHDP01880 384 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 UQCRHP07919 91 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 NUCB2P80303 420 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 USP19O94966 1318 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 MROH1Q8NDA8 1641 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 APAF1O14727 1248 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 SETD1AO15047 1707 aaKnown RBP4.82□□□□□ -1.64
CCNL1-204ENST00000464316 CDK11BP21127 795 aaKnown RBP4.82□□□□□ -1.64
CCNL1-204ENST00000464316 PPP2R1AP30153 589 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 CHAF1AQ13111 956 aaPredicted RBP4.82□□□□□ -1.64
CCNL1-204ENST00000464316 SNX21Q969T3 373 aa4.82□□□□□ -1.64
CCNL1-204ENST00000464316 ERCC6L2Q5T890 1561 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 ARID3CA6NKF2 412 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 SASS6Q6UVJ0 657 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 GTPBP4Q9BZE4 634 aaKnown RBP4.81□□□□□ -1.64
CCNL1-204ENST00000464316 ABCC2Q92887 1545 aa4.81□□□□□ -1.64
CCNL1-204ENST00000464316 BCAR3O75815 825 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms