RNA–Protein interactions for RNA: ENST00000412134.5

LINC01249-201, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 1 (best) BASIC

Gene LINC01249, Length 2,663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-201ENST00000412134 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.15
LINC01249-201ENST00000412134 RNF17Q9BXT8 1623 aaKnown RBP7.89□□□□□ -1.15
LINC01249-201ENST00000412134 CASKIN1Q8WXD9 1431 aa7.89□□□□□ -1.15
LINC01249-201ENST00000412134 GPATCH8Q9UKJ3 1502 aaKnown RBP7.89□□□□□ -1.15
LINC01249-201ENST00000412134 ZMYND15Q9H091 742 aa7.88□□□□□ -1.15
LINC01249-201ENST00000412134 PZPP20742 1482 aa7.88□□□□□ -1.15
LINC01249-201ENST00000412134 ARHGEF1Q92888 912 aaKnown RBP7.88□□□□□ -1.15
LINC01249-201ENST00000412134 RSPH6AQ9H0K4 717 aa7.88□□□□□ -1.15
LINC01249-201ENST00000412134 RGS17Q9UGC6 210 aaPredicted RBP7.88□□□□□ -1.15
LINC01249-201ENST00000412134 NLRP1Q9C000 1473 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 TNRQ92752 1358 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 LRRC7Q96NW7 1537 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 IQGAP1P46940 1657 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 DCAF8Q5TAQ9 597 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 NPM2Q86SE8 214 aaKnown RBP7.87□□□□□ -1.15
LINC01249-201ENST00000412134 ANKLE2Q86XL3 938 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 STRCP1A6NGW2 1772 aa7.87□□□□□ -1.15
LINC01249-201ENST00000412134 NPHP4O75161 1426 aaPredicted RBP7.86□□□□□ -1.15
LINC01249-201ENST00000412134 RTEL1-TNFRSF6BF6WH68 1400 aa7.86□□□□□ -1.15
LINC01249-201ENST00000412134 GGT6Q6P531 493 aa7.86□□□□□ -1.15
LINC01249-201ENST00000412134 UBTFP17480 764 aaKnown RBP7.85□□□□□ -1.15
LINC01249-201ENST00000412134 STK24Q9Y6E0 443 aa7.85□□□□□ -1.15
LINC01249-201ENST00000412134 KDM5DQ9BY66 1539 aa7.85□□□□□ -1.15
LINC01249-201ENST00000412134 THEMISQ8N1K5 641 aaPredicted RBP7.85□□□□□ -1.15
LINC01249-201ENST00000412134 FYCO1Q9BQS8 1478 aa7.85□□□□□ -1.15
LINC01249-201ENST00000412134 UGGT1Q9NYU2 1555 aa7.85□□□□□ -1.15
LINC01249-201ENST00000412134 HNRNPMP52272 730 aaKnown RBP eCLIP7.85□□□□□ -1.15
LINC01249-201ENST00000412134 TRIM26Q12899 539 aaPredicted RBP7.84□□□□□ -1.15
LINC01249-201ENST00000412134 FAM212AQ96EL1 285 aa7.84□□□□□ -1.15
LINC01249-201ENST00000412134 DHX29Q7Z478 1369 aaKnown RBP7.84□□□□□ -1.15
LINC01249-201ENST00000412134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.84□□□□□ -1.15
LINC01249-201ENST00000412134 MIA2Q96PC5 1412 aa7.84□□□□□ -1.15
LINC01249-201ENST00000412134 ZC3H13Q5T200 1668 aaKnown RBP7.84□□□□□ -1.15
LINC01249-201ENST00000412134 BCL11BQ9C0K0 894 aaPredicted RBP7.84□□□□□ -1.16
LINC01249-201ENST00000412134 SLC24A3Q9HC58 644 aa7.84□□□□□ -1.16
LINC01249-201ENST00000412134 MBD5Q9P267 1494 aa7.83□□□□□ -1.16
LINC01249-201ENST00000412134 ZNF777Q9ULD5 760 aaPredicted RBP7.83□□□□□ -1.16
LINC01249-201ENST00000412134 FAM135BQ49AJ0 1406 aa7.82□□□□□ -1.16
LINC01249-201ENST00000412134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.82□□□□□ -1.16
LINC01249-201ENST00000412134 FBXO31Q5XUX0 539 aaPredicted RBP7.82□□□□□ -1.16
LINC01249-201ENST00000412134 ZFP91Q96JP5 570 aaPredicted RBP7.82□□□□□ -1.16
LINC01249-201ENST00000412134 XIRP1Q702N8 1843 aaKnown RBP7.82□□□□□ -1.16
LINC01249-201ENST00000412134 TESPA1A2RU30 521 aaPredicted RBP7.81□□□□□ -1.16
LINC01249-201ENST00000412134 SMYD5Q6GMV2 418 aa7.81□□□□□ -1.16
LINC01249-201ENST00000412134 CFDP1Q9UEE9 299 aaPredicted RBP7.81□□□□□ -1.16
LINC01249-201ENST00000412134 ZMYND10O75800 440 aa7.81□□□□□ -1.16
LINC01249-201ENST00000412134 CCNB3Q8WWL7 1395 aa7.8□□□□□ -1.16
LINC01249-201ENST00000412134 ABCB7O75027 752 aa7.8□□□□□ -1.16
LINC01249-201ENST00000412134 POTEAQ6S8J7 498 aa7.8□□□□□ -1.16
LINC01249-201ENST00000412134 C1QBPQ07021 282 aaKnown RBP7.79□□□□□ -1.16
LINC01249-201ENST00000412134 RNF39Q9H2S5 420 aa7.78□□□□□ -1.16
LINC01249-201ENST00000412134 WASHC2CQ9Y4E1 1318 aa7.78□□□□□ -1.16
LINC01249-201ENST00000412134 TIAM1Q13009 1591 aa7.78□□□□□ -1.16
LINC01249-201ENST00000412134 UBR1Q8IWV7 1749 aa7.78□□□□□ -1.16
LINC01249-201ENST00000412134 ARHGAP23Q9P227 1491 aa7.78□□□□□ -1.16
LINC01249-201ENST00000412134 SLIT1O75093 1534 aa7.77□□□□□ -1.16
LINC01249-201ENST00000412134 SCAF11Q99590 1463 aaKnown RBP7.77□□□□□ -1.16
LINC01249-201ENST00000412134 KIF3BO15066 747 aa7.77□□□□□ -1.17
LINC01249-201ENST00000412134 SETD1AO15047 1707 aaKnown RBP7.77□□□□□ -1.17
LINC01249-201ENST00000412134 CCDC141Q6ZP82 1450 aa7.77□□□□□ -1.17
LINC01249-201ENST00000412134 HRCP23327 699 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 RSPH4AQ5TD94 716 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 CADPS2Q86UW7 1296 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 ABCC3O15438 1527 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 ERVK-7P63135 1459 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 CAMSAP2Q08AD1 1489 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 LRRC9Q6ZRR7 1453 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 BCL11AQ9H165 835 aa7.76□□□□□ -1.17
LINC01249-201ENST00000412134 NCOA2Q15596 1464 aa7.75□□□□□ -1.17
LINC01249-201ENST00000412134 ROBO1Q9Y6N7 1651 aa7.75□□□□□ -1.17
LINC01249-201ENST00000412134 BARGINQ6ZT62 677 aa7.75□□□□□ -1.17
LINC01249-201ENST00000412134 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
LINC01249-201ENST00000412134 ARHGEF5Q12774 1597 aa7.75□□□□□ -1.17
LINC01249-201ENST00000412134 EHBP1L1Q8N3D4 1523 aa7.75□□□□□ -1.17
LINC01249-201ENST00000412134 ZNF644Q9H582 1327 aaPredicted RBP7.75□□□□□ -1.17
LINC01249-201ENST00000412134 EIF2AK4Q9P2K8 1649 aaKnown RBP7.75□□□□□ -1.17
LINC01249-201ENST00000412134 MTUS2Q5JR59 1369 aa7.74□□□□□ -1.17
LINC01249-201ENST00000412134 MAP3K1Q13233 1512 aa7.74□□□□□ -1.17
LINC01249-201ENST00000412134 E2F4Q16254 413 aa7.74□□□□□ -1.17
LINC01249-201ENST00000412134 AK7Q96M32 723 aa7.74□□□□□ -1.17
LINC01249-201ENST00000412134 KDM5AP29375 1690 aaKnown RBP7.73□□□□□ -1.17
LINC01249-201ENST00000412134 MROH1Q8NDA8 1641 aa7.73□□□□□ -1.17
LINC01249-201ENST00000412134 SRCAPQ6ZRS2 3230 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC01249-201ENST00000412134 JCADQ9P266 1359 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 MAST1Q9Y2H9 1570 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 ARHGAP31Q2M1Z3 1444 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 NWD1Q149M9 1564 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 TMEM94Q12767 1356 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 LTKP29376 864 aa7.72□□□□□ -1.17
LINC01249-201ENST00000412134 CCDC9Q9Y3X0 531 aaKnown RBP7.72□□□□□ -1.17
LINC01249-201ENST00000412134 NKTRP30414 1462 aaKnown RBP7.71□□□□□ -1.17
LINC01249-201ENST00000412134 PRDM15P57071 1507 aaPredicted RBP7.71□□□□□ -1.18
LINC01249-201ENST00000412134 PHLPP1O60346 1717 aa7.7□□□□□ -1.18
LINC01249-201ENST00000412134 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
LINC01249-201ENST00000412134 ZBTB7CA1YPR0 619 aa7.7□□□□□ -1.18
LINC01249-201ENST00000412134 TXNDC2Q86VQ3 553 aa7.7□□□□□ -1.18
LINC01249-201ENST00000412134 FGD6Q6ZV73 1430 aa7.7□□□□□ -1.18
LINC01249-201ENST00000412134 TET3O43151 1660 aa7.7□□□□□ -1.18
LINC01249-201ENST00000412134 KCNA6P17658 529 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms