RNA–Protein interactions for RNA: ENST00000403444.7

CEACAM1-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-207ENST00000403444 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.96
CEACAM1-207ENST00000403444 PPP6R1Q9UPN7 881 aa9.02□□□□□ -0.96
CEACAM1-207ENST00000403444 MYO3AQ8NEV4 1616 aa9.02□□□□□ -0.97
CEACAM1-207ENST00000403444 IQGAP1P46940 1657 aa9.01□□□□□ -0.97
CEACAM1-207ENST00000403444 KLHL34Q8N239 644 aa9.01□□□□□ -0.97
CEACAM1-207ENST00000403444 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
CEACAM1-207ENST00000403444 RBM19Q9Y4C8 960 aaKnown RBP9.01□□□□□ -0.97
CEACAM1-207ENST00000403444 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
CEACAM1-207ENST00000403444 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
CEACAM1-207ENST00000403444 SPATA31E1Q6ZUB1 1445 aa9□□□□□ -0.97
CEACAM1-207ENST00000403444 UGGT1Q9NYU2 1555 aa8.99□□□□□ -0.97
CEACAM1-207ENST00000403444 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
CEACAM1-207ENST00000403444 NEXMIFQ5QGS0 1516 aa8.98□□□□□ -0.97
CEACAM1-207ENST00000403444 UHRF1BP1Q6BDS2 1440 aa8.98□□□□□ -0.97
CEACAM1-207ENST00000403444 KNDC1Q76NI1 1749 aa8.98□□□□□ -0.97
CEACAM1-207ENST00000403444 MSH5O43196 834 aa8.98□□□□□ -0.97
CEACAM1-207ENST00000403444 NPATQ14207 1427 aa8.97□□□□□ -0.97
CEACAM1-207ENST00000403444 AFAP1Q8N556 730 aa8.97□□□□□ -0.97
CEACAM1-207ENST00000403444 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
CEACAM1-207ENST00000403444 MYOM2P54296 1465 aa8.97□□□□□ -0.97
CEACAM1-207ENST00000403444 SPAG9O60271 1321 aaKnown RBP8.96□□□□□ -0.98
CEACAM1-207ENST00000403444 ERVK-7P63135 1459 aa8.96□□□□□ -0.98
CEACAM1-207ENST00000403444 RIMS1Q86UR5 1692 aaKnown RBP8.95□□□□□ -0.98
CEACAM1-207ENST00000403444 SETBP1Q9Y6X0 1596 aa8.95□□□□□ -0.98
CEACAM1-207ENST00000403444 CNTLNQ9NXG0 1405 aa8.95□□□□□ -0.98
CEACAM1-207ENST00000403444 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
CEACAM1-207ENST00000403444 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
CEACAM1-207ENST00000403444 GLIPR1L2Q4G1C9 344 aa8.93□□□□□ -0.98
CEACAM1-207ENST00000403444 BCL11BQ9C0K0 894 aaPredicted RBP8.93□□□□□ -0.98
CEACAM1-207ENST00000403444 PRAG1Q86YV5 1406 aa8.92□□□□□ -0.98
CEACAM1-207ENST00000403444 VSIG10Q8N0Z9 540 aa8.92□□□□□ -0.98
CEACAM1-207ENST00000403444 MRS2Q9HD23 443 aa8.92□□□□□ -0.98
CEACAM1-207ENST00000403444 B4GALNT3Q6L9W6 998 aa8.92□□□□□ -0.98
CEACAM1-207ENST00000403444 SLIT1O75093 1534 aa8.91□□□□□ -0.98
CEACAM1-207ENST00000403444 RAPGEF3O95398 923 aa8.91□□□□□ -0.98
CEACAM1-207ENST00000403444 FGD1P98174 961 aa8.91□□□□□ -0.98
CEACAM1-207ENST00000403444 ADGRB1O14514 1584 aa8.91□□□□□ -0.98
CEACAM1-207ENST00000403444 ARHGEF28Q8N1W1 1705 aaKnown RBP8.9□□□□□ -0.98
CEACAM1-207ENST00000403444 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.98
CEACAM1-207ENST00000403444 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.99
CEACAM1-207ENST00000403444 NBR1Q14596 966 aa8.9□□□□□ -0.99
CEACAM1-207ENST00000403444 CCDC184Q52MB2 194 aa8.9□□□□□ -0.99
CEACAM1-207ENST00000403444 ARHGAP23Q9P227 1491 aa8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 NCBP3Q53F19 620 aaKnown RBP8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 MPHOSPH9Q99550 1183 aa8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 RALGAPBQ86X10 1494 aa8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
CEACAM1-207ENST00000403444 TSPY4P0CV99 314 aa8.88□□□□□ -0.99
CEACAM1-207ENST00000403444 TSPY10P0CW01 314 aa8.88□□□□□ -0.99
CEACAM1-207ENST00000403444 MYOM1P52179 1685 aa8.88□□□□□ -0.99
CEACAM1-207ENST00000403444 SLC4A1APQ9BWU0 796 aaKnown RBP8.87□□□□□ -0.99
CEACAM1-207ENST00000403444 XRN1Q8IZH2 1706 aaKnown RBP8.87□□□□□ -0.99
CEACAM1-207ENST00000403444 DIP2AQ14689 1571 aa8.86□□□□□ -0.99
CEACAM1-207ENST00000403444 CEP170BQ9Y4F5 1589 aaPredicted RBP8.86□□□□□ -0.99
CEACAM1-207ENST00000403444 MED14O60244 1454 aa8.86□□□□□ -0.99
CEACAM1-207ENST00000403444 NUP155O75694 1391 aa8.85□□□□□ -0.99
CEACAM1-207ENST00000403444 GPRASP1Q5JY77 1395 aa8.85□□□□□ -0.99
CEACAM1-207ENST00000403444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.85□□□□□ -0.994e-8■□□□□ 11.2
CEACAM1-207ENST00000403444 RBM10P98175 930 aaKnown RBP8.85□□□□□ -0.99
CEACAM1-207ENST00000403444 PIK3C2GO75747 1445 aa8.85□□□□□ -0.99
CEACAM1-207ENST00000403444 A2ML1A8K2U0 1454 aa8.85□□□□□ -0.99
CEACAM1-207ENST00000403444 NLRP1Q9C000 1473 aa8.85□□□□□ -0.99
CEACAM1-207ENST00000403444 RGL3Q3MIN7 710 aa8.84□□□□□ -0.99
CEACAM1-207ENST00000403444 NWD1Q149M9 1564 aa8.84□□□□□ -0.99
CEACAM1-207ENST00000403444 STRCQ7RTU9 1775 aa8.84□□□□□ -0.99
CEACAM1-207ENST00000403444 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
CEACAM1-207ENST00000403444 L3MBTL2Q969R5 705 aa8.84□□□□□ -0.99
CEACAM1-207ENST00000403444 PTPRMP28827 1452 aa8.83□□□□□ -1
CEACAM1-207ENST00000403444 TOPAZ1Q8N9V7 1692 aa8.83□□□□□ -1
CEACAM1-207ENST00000403444 ADGRB2O60241 1585 aa8.83□□□□□ -1
CEACAM1-207ENST00000403444 AAMPQ13685 434 aa8.83□□□□□ -1
CEACAM1-207ENST00000403444 CPS1P31327 1500 aa8.82□□□□□ -1
CEACAM1-207ENST00000403444 CHD2O14647 1828 aaKnown RBP8.82□□□□□ -1
CEACAM1-207ENST00000403444 CFAP65Q6ZU64 1925 aaKnown RBP8.81□□□□□ -1
CEACAM1-207ENST00000403444 XIRP1Q702N8 1843 aaKnown RBP8.81□□□□□ -1
CEACAM1-207ENST00000403444 QRICH2Q9H0J4 1663 aa8.81□□□□□ -1
CEACAM1-207ENST00000403444 DLC1Q96QB1 1528 aa8.8□□□□□ -1
CEACAM1-207ENST00000403444 STRCP1A6NGW2 1772 aa8.8□□□□□ -1
CEACAM1-207ENST00000403444 USP54Q70EL1 1684 aa8.8□□□□□ -1
CEACAM1-207ENST00000403444 KANK1Q14678 1352 aa8.79□□□□□ -1
CEACAM1-207ENST00000403444 ALKQ9UM73 1620 aa8.79□□□□□ -1
CEACAM1-207ENST00000403444 C11orf95C9JLR9 678 aaPredicted RBP8.79□□□□□ -1
CEACAM1-207ENST00000403444 CCDC144AA2RUR9 1427 aa8.78□□□□□ -1
CEACAM1-207ENST00000403444 WASHC2AQ641Q2 1341 aa8.78□□□□□ -1
CEACAM1-207ENST00000403444 ZMYM3Q14202 1370 aa8.77□□□□□ -1
CEACAM1-207ENST00000403444 USP32Q8NFA0 1604 aa8.77□□□□□ -1.01
CEACAM1-207ENST00000403444 TMC1Q8TDI8 760 aa8.77□□□□□ -1.01
CEACAM1-207ENST00000403444 FANCIQ9NVI1 1328 aa8.77□□□□□ -1.01
CEACAM1-207ENST00000403444 PKD2Q13563 968 aa8.77□□□□□ -1.01
CEACAM1-207ENST00000403444 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
CEACAM1-207ENST00000403444 TAF7LQ5H9L4 462 aa8.76□□□□□ -1.01
CEACAM1-207ENST00000403444 ARXQ96QS3 562 aa8.76□□□□□ -1.01
CEACAM1-207ENST00000403444 PIAS4Q8N2W9 510 aaPredicted RBP8.76□□□□□ -1.01
CEACAM1-207ENST00000403444 NRKQ7Z2Y5 1582 aa8.75□□□□□ -1.01
CEACAM1-207ENST00000403444 TECPR2O15040 1411 aa8.75□□□□□ -1.01
CEACAM1-207ENST00000403444 SETD1BQ9UPS6 1966 aaKnown RBP8.75□□□□□ -1.01
CEACAM1-207ENST00000403444 KIF3BO15066 747 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms