RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.33□□□□□ -1.24
RFFL-202ENST00000394597 NEUROD2Q15784 382 aa7.32□□□□□ -1.24
RFFL-202ENST00000394597 MAPK8IP3Q9UPT6 1336 aa7.32□□□□□ -1.24
RFFL-202ENST00000394597 A2MP01023 1474 aa7.32□□□□□ -1.24
RFFL-202ENST00000394597 ERCC6L2Q5T890 1561 aa7.32□□□□□ -1.24
RFFL-202ENST00000394597 TEX14Q8IWB6 1497 aa7.32□□□□□ -1.24
RFFL-202ENST00000394597 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
RFFL-202ENST00000394597 MINK1Q8N4C8 1332 aaPredicted RBP7.32□□□□□ -1.24
RFFL-202ENST00000394597 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
RFFL-202ENST00000394597 UPF2Q9HAU5 1272 aaKnown RBP7.31□□□□□ -1.24
RFFL-202ENST00000394597 POGZQ7Z3K3 1410 aa7.31□□□□□ -1.24
RFFL-202ENST00000394597 FAM135AQ9P2D6 1515 aa7.31□□□□□ -1.24
RFFL-202ENST00000394597 MBD5Q9P267 1494 aa7.3□□□□□ -1.24
RFFL-202ENST00000394597 LMOD2Q6P5Q4 547 aa7.3□□□□□ -1.24
RFFL-202ENST00000394597 ARHGEF5Q12774 1597 aa7.3□□□□□ -1.24
RFFL-202ENST00000394597 PZPP20742 1482 aa7.3□□□□□ -1.24
RFFL-202ENST00000394597 BECN1Q14457 450 aa7.3□□□□□ -1.24
RFFL-202ENST00000394597 ZMYND15Q9H091 742 aa7.3□□□□□ -1.24
RFFL-202ENST00000394597 IDI1Q13907 227 aa7.29□□□□□ -1.24
RFFL-202ENST00000394597 CGNL1Q0VF96 1302 aa7.29□□□□□ -1.24
RFFL-202ENST00000394597 NCBP3Q53F19 620 aaKnown RBP7.29□□□□□ -1.24
RFFL-202ENST00000394597 TXNDC2Q86VQ3 553 aa7.29□□□□□ -1.24
RFFL-202ENST00000394597 ZCCHC11Q5TAX3 1644 aaKnown RBP7.29□□□□□ -1.24
RFFL-202ENST00000394597 NCLP19338 710 aaKnown RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 MYO5CQ9NQX4 1742 aa7.28□□□□□ -1.24
RFFL-202ENST00000394597 U2AF1L5P0DN76 240 aaPredicted RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 CDK11BP21127 795 aaKnown RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 U2AF1Q01081 240 aaKnown RBP eCLIP7.28□□□□□ -1.24
RFFL-202ENST00000394597 FBXO31Q5XUX0 539 aaPredicted RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 THEMISQ8N1K5 641 aaPredicted RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 C11orf95C9JLR9 678 aaPredicted RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 TCERG1O14776 1098 aaKnown RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 NGDNQ8NEJ9 315 aaKnown RBP7.28□□□□□ -1.24
RFFL-202ENST00000394597 CLASP1Q7Z460 1538 aa7.28□□□□□ -1.24
RFFL-202ENST00000394597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.28□□□□□ -1.243e-6■■□□□ 13.9
RFFL-202ENST00000394597 NUTM2FA1L443 756 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 SOX12O15370 315 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 AMER1Q5JTC6 1135 aaPredicted RBP7.27□□□□□ -1.25
RFFL-202ENST00000394597 GCC2Q8IWJ2 1684 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 ADGRF5Q8IZF2 1346 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 CABP2Q9NPB3 220 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 NEO1Q92859 1461 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 ARID3AQ99856 593 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 ATP7AQ04656 1500 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 ADGBQ8N7X0 1667 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 SAMD9LQ8IVG5 1584 aa7.27□□□□□ -1.25
RFFL-202ENST00000394597 PRAM1Q96QH2 718 aa7.26□□□□□ -1.25
RFFL-202ENST00000394597 HAP1P54257 671 aaPredicted RBP7.26□□□□□ -1.25
RFFL-202ENST00000394597 PDE3BQ13370 1112 aa7.26□□□□□ -1.25
RFFL-202ENST00000394597 TTC37Q6PGP7 1564 aa7.26□□□□□ -1.25
RFFL-202ENST00000394597 FAM43AQ8N2R8 423 aa7.26□□□□□ -1.25
RFFL-202ENST00000394597 FRAT1Q92837 279 aaPredicted RBP7.26□□□□□ -1.25
RFFL-202ENST00000394597 ADCY10Q96PN6 1610 aa7.26□□□□□ -1.25
RFFL-202ENST00000394597 PREX2Q70Z35 1606 aa7.25□□□□□ -1.25
RFFL-202ENST00000394597 SLC4A3P48751 1232 aa7.25□□□□□ -1.25
RFFL-202ENST00000394597 C14orf93Q9H972 538 aaKnown RBP7.25□□□□□ -1.25
RFFL-202ENST00000394597 PDE4AP27815 886 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 NFKBIBQ15653 356 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 COG3Q96JB2 828 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 BRD4O60885 1362 aaPredicted RBP7.24□□□□□ -1.25
RFFL-202ENST00000394597 NOS1P29475 1434 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 CCDC146Q8IYE0 955 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 SLC12A5Q9H2X9 1139 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 ZBED9Q6R2W3 1325 aa7.24□□□□□ -1.25
RFFL-202ENST00000394597 GOLGA2Q08379 1002 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 CDC42BPAQ5VT25 1732 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 SHROOM2Q13796 1616 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 PRAG1Q86YV5 1406 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 RGS3P49796 1198 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
RFFL-202ENST00000394597 RALGAPBQ86X10 1494 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 RCAN3Q9UKA8 241 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 KDM6BO15054 1643 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 ABCC1P33527 1531 aa7.23□□□□□ -1.25
RFFL-202ENST00000394597 GOLGA6L3A6NEY3 463 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 CFAP74Q9C0B2 1584 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 ATP10AO60312 1499 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 SCAF11Q99590 1463 aaKnown RBP7.22□□□□□ -1.25
RFFL-202ENST00000394597 LRRIQ1Q96JM4 1722 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 CEBPAP49715 358 aaPredicted RBP7.22□□□□□ -1.25
RFFL-202ENST00000394597 RRP9O43818 475 aaKnown RBP7.22□□□□□ -1.25
RFFL-202ENST00000394597 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 ARHGEF12Q9NZN5 1544 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 PPP2R1AP30153 589 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 SLC26A8Q96RN1 970 aa7.22□□□□□ -1.25
RFFL-202ENST00000394597 MS4A1P11836 297 aa7.21□□□□□ -1.25
RFFL-202ENST00000394597 CALD1Q05682 793 aaKnown RBP7.21□□□□□ -1.25
RFFL-202ENST00000394597 SLKQ9H2G2 1235 aaPredicted RBP7.21□□□□□ -1.25
RFFL-202ENST00000394597 MAST1Q9Y2H9 1570 aa7.21□□□□□ -1.25
RFFL-202ENST00000394597 MSNP26038 577 aaKnown RBP7.21□□□□□ -1.26
RFFL-202ENST00000394597 GGNBP2Q9H3C7 697 aa7.21□□□□□ -1.26
RFFL-202ENST00000394597 MYH16Q9H6N6 1097 aa7.21□□□□□ -1.26
RFFL-202ENST00000394597 ARAP3Q8WWN8 1544 aa7.21□□□□□ -1.26
RFFL-202ENST00000394597 AMPHP49418 695 aa7.21□□□□□ -1.26
RFFL-202ENST00000394597 FTSJ3Q8IY81 847 aaKnown RBP7.21□□□□□ -1.26
RFFL-202ENST00000394597 DNTTIP2Q5QJE6 756 aaKnown RBP7.2□□□□□ -1.26
RFFL-202ENST00000394597 NGEFQ8N5V2 710 aa7.2□□□□□ -1.26
RFFL-202ENST00000394597 UHRF1BP1Q6BDS2 1440 aa7.2□□□□□ -1.26
RFFL-202ENST00000394597 RTF1Q92541 710 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms