RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 TRPM2O94759 1503 aa14.81□□□□□ -0.04
CCDC40-203ENST00000374877 CCDC144AA2RUR9 1427 aa14.81□□□□□ -0.04
CCDC40-203ENST00000374877 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
CCDC40-203ENST00000374877 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
CCDC40-203ENST00000374877 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
CCDC40-203ENST00000374877 SPHKAPQ2M3C7 1700 aa14.78□□□□□ -0.04
CCDC40-203ENST00000374877 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
CCDC40-203ENST00000374877 EXOC6Q8TAG9 804 aa14.78□□□□□ -0.04
CCDC40-203ENST00000374877 CEP152O94986 1710 aa14.78□□□□□ -0.04
CCDC40-203ENST00000374877 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.04
CCDC40-203ENST00000374877 GGT6Q6P531 493 aa14.77□□□□□ -0.04
CCDC40-203ENST00000374877 ARID4BQ4LE39 1312 aaPredicted RBP14.77□□□□□ -0.04
CCDC40-203ENST00000374877 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.05
CCDC40-203ENST00000374877 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.05
CCDC40-203ENST00000374877 ROCK2O75116 1388 aaKnown RBP14.76□□□□□ -0.05
CCDC40-203ENST00000374877 CAMSAP1Q5T5Y3 1602 aa14.76□□□□□ -0.05
CCDC40-203ENST00000374877 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
CCDC40-203ENST00000374877 NPATQ14207 1427 aa14.74□□□□□ -0.05
CCDC40-203ENST00000374877 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
CCDC40-203ENST00000374877 ST20-MTHFSA0A0A6YYL1 179 aa14.74□□□□□ -0.05
CCDC40-203ENST00000374877 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
CCDC40-203ENST00000374877 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
CCDC40-203ENST00000374877 UHRF1BP1Q6BDS2 1440 aa14.73□□□□□ -0.05
CCDC40-203ENST00000374877 TCERG1O14776 1098 aaKnown RBP14.72□□□□□ -0.05
CCDC40-203ENST00000374877 CLTCL1P53675 1640 aa14.72□□□□□ -0.05
CCDC40-203ENST00000374877 PDE4AP27815 886 aa14.72□□□□□ -0.05
CCDC40-203ENST00000374877 BRD4O60885 1362 aaPredicted RBP14.72□□□□□ -0.05
CCDC40-203ENST00000374877 LRPPRCP42704 1394 aaKnown RBP14.72□□□□□ -0.05
CCDC40-203ENST00000374877 NOS1P29475 1434 aa14.72□□□□□ -0.05
CCDC40-203ENST00000374877 SIGLEC1Q9BZZ2 1709 aa14.71□□□□□ -0.05
CCDC40-203ENST00000374877 RALBP1Q15311 655 aa14.71□□□□□ -0.05
CCDC40-203ENST00000374877 NEFMP07197 916 aa14.7□□□□□ -0.06
CCDC40-203ENST00000374877 DCAF11Q8TEB1 546 aa14.69□□□□□ -0.06
CCDC40-203ENST00000374877 STAC3Q96MF2 364 aa14.69□□□□□ -0.06
CCDC40-203ENST00000374877 RALGAPBQ86X10 1494 aa14.69□□□□□ -0.06
CCDC40-203ENST00000374877 BACH2Q9BYV9 841 aa14.67□□□□□ -0.06
CCDC40-203ENST00000374877 NLRP13Q86W25 1043 aa14.66□□□□□ -0.06
CCDC40-203ENST00000374877 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
CCDC40-203ENST00000374877 PLIN1O60240 522 aa14.66□□□□□ -0.06
CCDC40-203ENST00000374877 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
CCDC40-203ENST00000374877 PIK3C2BO00750 1634 aa14.65□□□□□ -0.06
CCDC40-203ENST00000374877 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
CCDC40-203ENST00000374877 ADGRB3O60242 1522 aa14.65□□□□□ -0.06
CCDC40-203ENST00000374877 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
CCDC40-203ENST00000374877 SYNMO15061 1565 aa14.64□□□□□ -0.07
CCDC40-203ENST00000374877 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
CCDC40-203ENST00000374877 SKAP1Q86WV1 359 aa14.64□□□□□ -0.07
CCDC40-203ENST00000374877 PRAG1Q86YV5 1406 aa14.64□□□□□ -0.07
CCDC40-203ENST00000374877 CLTCQ00610 1675 aaKnown RBP14.64□□□□□ -0.07
CCDC40-203ENST00000374877 MS4A1P11836 297 aa14.63□□□□□ -0.07
CCDC40-203ENST00000374877 PREX1Q8TCU6 1659 aa14.63□□□□□ -0.07
CCDC40-203ENST00000374877 UGGT1Q9NYU2 1555 aa14.63□□□□□ -0.07
CCDC40-203ENST00000374877 ERVK-7P63135 1459 aa14.63□□□□□ -0.07
CCDC40-203ENST00000374877 KIF1BO60333 1816 aa14.63□□□□□ -0.07
CCDC40-203ENST00000374877 SLC52A1Q9NWF4 448 aa14.62□□□□□ -0.07
CCDC40-203ENST00000374877 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
CCDC40-203ENST00000374877 CC2D1BQ5T0F9 858 aaKnown RBP14.61□□□□□ -0.07
CCDC40-203ENST00000374877 MYOM2P54296 1465 aa14.61□□□□□ -0.07
CCDC40-203ENST00000374877 RGL3Q3MIN7 710 aa14.61□□□□□ -0.07
CCDC40-203ENST00000374877 MROH2AA6NES4 1674 aa14.61□□□□□ -0.07
CCDC40-203ENST00000374877 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
CCDC40-203ENST00000374877 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
CCDC40-203ENST00000374877 USP35Q9P2H5 1018 aa14.6□□□□□ -0.07
CCDC40-203ENST00000374877 CRBNQ96SW2 442 aa14.6□□□□□ -0.07
CCDC40-203ENST00000374877 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
CCDC40-203ENST00000374877 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
CCDC40-203ENST00000374877 MLECQ14165 292 aa14.58□□□□□ -0.07
CCDC40-203ENST00000374877 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.07
CCDC40-203ENST00000374877 TRPM1Q7Z4N2 1603 aa14.58□□□□□ -0.08
CCDC40-203ENST00000374877 GPRASP1Q5JY77 1395 aa14.58□□□□□ -0.08
CCDC40-203ENST00000374877 LAMC1P11047 1609 aa14.58□□□□□ -0.08
CCDC40-203ENST00000374877 MADDQ8WXG6 1647 aa14.58□□□□□ -0.08
CCDC40-203ENST00000374877 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
CCDC40-203ENST00000374877 IFT172Q9UG01 1749 aa14.57□□□□□ -0.08
CCDC40-203ENST00000374877 NRXN1Q9ULB1 1477 aa14.56□□□□□ -0.08
CCDC40-203ENST00000374877 DDRGK1Q96HY6 314 aa14.56□□□□□ -0.08
CCDC40-203ENST00000374877 NBPF1Q3BBV0 1214 aa14.55□□□□□ -0.08
CCDC40-203ENST00000374877 PER1O15534 1290 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-203ENST00000374877 KIAA1210Q9ULL0 1709 aa14.54□□□□□ -0.08
CCDC40-203ENST00000374877 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
CCDC40-203ENST00000374877 IDI1Q13907 227 aa14.54□□□□□ -0.08
CCDC40-203ENST00000374877 DAXXQ9UER7 740 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-203ENST00000374877 TMEM131LA2VDJ0 1609 aa14.53□□□□□ -0.08
CCDC40-203ENST00000374877 FBXO31Q5XUX0 539 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-203ENST00000374877 C20orf194Q5TEA3 1177 aa14.53□□□□□ -0.08
CCDC40-203ENST00000374877 PPLO60437 1756 aa14.52□□□□□ -0.08
CCDC40-203ENST00000374877 PANK3Q9H999 370 aa14.52□□□□□ -0.08
CCDC40-203ENST00000374877 ZFYVE9O95405 1425 aa14.52□□□□□ -0.08
CCDC40-203ENST00000374877 CFAP65Q6ZU64 1925 aaKnown RBP14.52□□□□□ -0.09
CCDC40-203ENST00000374877 NEXMIFQ5QGS0 1516 aa14.51□□□□□ -0.09
CCDC40-203ENST00000374877 CHGAP10645 457 aaKnown RBP14.5□□□□□ -0.09
CCDC40-203ENST00000374877 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
CCDC40-203ENST00000374877 TNRQ92752 1358 aa14.5□□□□□ -0.09
CCDC40-203ENST00000374877 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
CCDC40-203ENST00000374877 DISP3Q9P2K9 1392 aa14.49□□□□□ -0.09
CCDC40-203ENST00000374877 KDM5AP29375 1690 aaKnown RBP14.49□□□□□ -0.09
CCDC40-203ENST00000374877 NFKBIBQ15653 356 aa14.49□□□□□ -0.09
CCDC40-203ENST00000374877 PIK3C2GO75747 1445 aa14.48□□□□□ -0.09
CCDC40-203ENST00000374877 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-203ENST00000374877 ADAMTS8Q9UP79 889 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms