RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 DIAPH3Q9NSV4 1193 aa6.8□□□□□ -1.32
PTPRD-202ENST00000356435 EVC2Q86UK5 1308 aa6.79□□□□□ -1.32
PTPRD-202ENST00000356435 UBE2Q2Q8WVN8 375 aa6.79□□□□□ -1.32
PTPRD-202ENST00000356435 SETQ01105 290 aaPredicted RBP6.79□□□□□ -1.32
PTPRD-202ENST00000356435 FAM184AQ8NB25 1140 aa6.79□□□□□ -1.32
PTPRD-202ENST00000356435 CPLX2Q6PUV4 134 aaKnown RBP6.79□□□□□ -1.32
PTPRD-202ENST00000356435 WWC1Q8IX03 1113 aa6.79□□□□□ -1.32
PTPRD-202ENST00000356435 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTPRD-202ENST00000356435 MPHOSPH9Q99550 1183 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 ROCK1Q13464 1354 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 RTN4Q9NQC3 1192 aaKnown RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 FGD6Q6ZV73 1430 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 TNNT3P45378 269 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 HOOK1Q9UJC3 728 aaKnown RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 VGFO15240 615 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 DDX58O95786 925 aaKnown RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 RUFY2Q8WXA3 655 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 FYCO1Q9BQS8 1478 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 EFCAB5A4FU69 1503 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 WDR97A6NE52 1622 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 NUTM2FA1L443 756 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 IPO7O95373 1038 aaKnown RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 CUX1P39880 1505 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 GOLGA6L3A6NEY3 463 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 KIF15Q9NS87 1388 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 CASKIN1Q8WXD9 1431 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 ERICH2A1L162 156 aa6.78□□□□□ -1.32
PTPRD-202ENST00000356435 C9orf78Q9NZ63 289 aaPredicted RBP6.78□□□□□ -1.32
PTPRD-202ENST00000356435 SLKQ9H2G2 1235 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-202ENST00000356435 NCOA2Q15596 1464 aa6.77□□□□□ -1.33
PTPRD-202ENST00000356435 TDRD9Q8NDG6 1382 aaKnown RBP6.77□□□□□ -1.33
PTPRD-202ENST00000356435 ATF3P18847 181 aa6.77□□□□□ -1.33
PTPRD-202ENST00000356435 PCMTD1Q96MG8 357 aaPredicted RBP6.77□□□□□ -1.33
PTPRD-202ENST00000356435 GSE1Q14687 1217 aa6.77□□□□□ -1.33
PTPRD-202ENST00000356435 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPRD-202ENST00000356435 R3HCC1Q9Y3T6 440 aaKnown RBP6.77□□□□□ -1.33
PTPRD-202ENST00000356435 CPLX1O14810 134 aa6.77□□□□□ -1.33
PTPRD-202ENST00000356435 CCDC146Q8IYE0 955 aa6.77□□□□□ -1.33
PTPRD-202ENST00000356435 CCDC7Q96M83 1385 aa6.77□□□□□ -1.33
PTPRD-202ENST00000356435 PSME1Q06323 249 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 APPP05067 770 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 IFIT2P09913 472 aaKnown RBP6.76□□□□□ -1.33
PTPRD-202ENST00000356435 MCTP1Q6DN14 999 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 NLRP13Q86W25 1043 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 GZF1Q9H116 711 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-202ENST00000356435 TRDNQ13061 729 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 NFXL1Q6ZNB6 911 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
PTPRD-202ENST00000356435 MIA2Q96PC5 1412 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 RILPL2Q969X0 211 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 RNF123Q5XPI4 1314 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 GOLGA6L19H0YKK7 550 aa6.76□□□□□ -1.33
PTPRD-202ENST00000356435 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
PTPRD-202ENST00000356435 GPS2Q13227 327 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 WWC2Q6AWC2 1192 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 MYOM3Q5VTT5 1437 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 CT47A1Q5JQC4 288 aaPredicted RBP6.75□□□□□ -1.33
PTPRD-202ENST00000356435 ANO2Q9NQ90 1003 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 BECN2A8MW95 431 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 BRMS1Q9HCU9 246 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 RDXP35241 583 aaKnown RBP6.75□□□□□ -1.33
PTPRD-202ENST00000356435 CCAR1Q8IX12 1150 aaKnown RBP6.75□□□□□ -1.33
PTPRD-202ENST00000356435 FBXO3Q9UK99 471 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 RNF20Q5VTR2 975 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 TRAK1Q9UPV9 953 aa6.75□□□□□ -1.33
PTPRD-202ENST00000356435 CLUAP1Q96AJ1 413 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 IGF1RP08069 1367 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 ODF2Q5BJF6 829 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 EIF2S2P20042 333 aaKnown RBP6.74□□□□□ -1.33
PTPRD-202ENST00000356435 G3BP1Q13283 466 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTPRD-202ENST00000356435 FAM43AQ8N2R8 423 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 NGEFQ8N5V2 710 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 FOXD4L1Q9NU39 408 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 BIVM-ERCC5R4GMW8 1640 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 MYBBP1AQ9BQG0 1328 aaKnown RBP6.74□□□□□ -1.33
PTPRD-202ENST00000356435 INSRP06213 1382 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 FHOD3Q2V2M9 1422 aa6.74□□□□□ -1.33
PTPRD-202ENST00000356435 RAPGEF4Q8WZA2 1011 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 ZKSCAN2Q63HK3 967 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 OSCARQ8IYS5 282 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 NCAPD3P42695 1498 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 REC8O95072 547 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 PTPRGP23470 1445 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 SAFBQ15424 915 aaKnown RBP eCLIP6.73□□□□□ -1.33
PTPRD-202ENST00000356435 PDE4AP27815 886 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 HSP90AB4PQ58FF6 505 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 NCOA1Q15788 1441 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 CDR1P51861 262 aa6.73□□□□□ -1.33
PTPRD-202ENST00000356435 SAMD1Q6SPF0 538 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-202ENST00000356435 CCAR2Q8N163 923 aaKnown RBP6.73□□□□□ -1.33
PTPRD-202ENST00000356435 MINK1Q8N4C8 1332 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-202ENST00000356435 ERC2O15083 957 aa6.72□□□□□ -1.33
PTPRD-202ENST00000356435 GPRASP1Q5JY77 1395 aa6.72□□□□□ -1.33
PTPRD-202ENST00000356435 FOXD4L5Q5VV16 416 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-202ENST00000356435 FOXD4L4Q8WXT5 416 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-202ENST00000356435 HMGXB3Q12766 1538 aa6.72□□□□□ -1.33
PTPRD-202ENST00000356435 E9PSI1 815 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms