RNA–Protein interactions for RNA: ENST00000344493.8

PAX3-203, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-203ENST00000344493 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
PAX3-203ENST00000344493 MFAP1P55081 439 aaKnown RBP18.48■□□□□ 0.55
PAX3-203ENST00000344493 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
PAX3-203ENST00000344493 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
PAX3-203ENST00000344493 PRAG1Q86YV5 1406 aa18.47■□□□□ 0.55
PAX3-203ENST00000344493 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
PAX3-203ENST00000344493 E9PSI1 815 aa18.46■□□□□ 0.55
PAX3-203ENST00000344493 ERBINQ96RT1 1412 aa18.46■□□□□ 0.55
PAX3-203ENST00000344493 CENPJQ9HC77 1338 aaPredicted RBP18.46■□□□□ 0.55
PAX3-203ENST00000344493 TNNQ9UQP3 1299 aa18.45■□□□□ 0.54
PAX3-203ENST00000344493 PRG4Q92954 1404 aaPredicted RBP18.45■□□□□ 0.54
PAX3-203ENST00000344493 PRDM4Q9UKN5 801 aa18.45■□□□□ 0.54
PAX3-203ENST00000344493 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
PAX3-203ENST00000344493 PMFBP1Q8TBY8 1022 aa18.44■□□□□ 0.54
PAX3-203ENST00000344493 ISY1Q9ULR0 285 aaKnown RBP18.43■□□□□ 0.54
PAX3-203ENST00000344493 AMER1Q5JTC6 1135 aaPredicted RBP18.43■□□□□ 0.54
PAX3-203ENST00000344493 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
PAX3-203ENST00000344493 ADGRL2O95490 1459 aa18.42■□□□□ 0.54
PAX3-203ENST00000344493 RLBP1P12271 317 aa18.42■□□□□ 0.54
PAX3-203ENST00000344493 HSCBQ8IWL3 235 aa18.41■□□□□ 0.54
PAX3-203ENST00000344493 FAM13BQ9NYF5 915 aa18.41■□□□□ 0.54
PAX3-203ENST00000344493 A0A0U1RQG5 324 aaPredicted RBP18.41■□□□□ 0.54
PAX3-203ENST00000344493 RIPK4P57078 832 aa18.41■□□□□ 0.54
PAX3-203ENST00000344493 BCL2L13Q9BXK5 485 aa18.41■□□□□ 0.54
PAX3-203ENST00000344493 MAGI2Q86UL8 1455 aa18.41■□□□□ 0.54
PAX3-203ENST00000344493 TNPO1Q92973 898 aaKnown RBP18.4■□□□□ 0.54
PAX3-203ENST00000344493 ARID3AQ99856 593 aa18.4■□□□□ 0.54
PAX3-203ENST00000344493 KDM5DQ9BY66 1539 aa18.39■□□□□ 0.53
PAX3-203ENST00000344493 CEP170Q5SW79 1584 aa18.39■□□□□ 0.53
PAX3-203ENST00000344493 TRPM1Q7Z4N2 1603 aa18.38■□□□□ 0.53
PAX3-203ENST00000344493 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
PAX3-203ENST00000344493 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
PAX3-203ENST00000344493 ADGBQ8N7X0 1667 aa18.38■□□□□ 0.53
PAX3-203ENST00000344493 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
PAX3-203ENST00000344493 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
PAX3-203ENST00000344493 GPRASP1Q5JY77 1395 aa18.38■□□□□ 0.53
PAX3-203ENST00000344493 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
PAX3-203ENST00000344493 OFD1O75665 1012 aa18.37■□□□□ 0.53
PAX3-203ENST00000344493 ZSCAN30Q86W11 494 aa18.37■□□□□ 0.53
PAX3-203ENST00000344493 RWDD1Q9H446 243 aaPredicted RBP18.36■□□□□ 0.53
PAX3-203ENST00000344493 CCDC144AA2RUR9 1427 aa18.36■□□□□ 0.53
PAX3-203ENST00000344493 R3HCC1Q9Y3T6 440 aaKnown RBP18.36■□□□□ 0.53
PAX3-203ENST00000344493 RTEL1-TNFRSF6BF6WH68 1400 aa18.36■□□□□ 0.53
PAX3-203ENST00000344493 TSPY4P0CV99 314 aa18.36■□□□□ 0.53
PAX3-203ENST00000344493 TSPY10P0CW01 314 aa18.36■□□□□ 0.53
PAX3-203ENST00000344493 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
PAX3-203ENST00000344493 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
PAX3-203ENST00000344493 NASPP49321 788 aaPredicted RBP18.35■□□□□ 0.53
PAX3-203ENST00000344493 CCDC173Q0VFZ6 552 aa18.34■□□□□ 0.53
PAX3-203ENST00000344493 RARSP54136 660 aaKnown RBP18.34■□□□□ 0.53
PAX3-203ENST00000344493 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
PAX3-203ENST00000344493 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.53
PAX3-203ENST00000344493 GBP4Q96PP9 640 aa18.33■□□□□ 0.53
PAX3-203ENST00000344493 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
PAX3-203ENST00000344493 DDIT3P35638 169 aa18.33■□□□□ 0.52
PAX3-203ENST00000344493 NINLQ9Y2I6 1382 aa18.33■□□□□ 0.52
PAX3-203ENST00000344493 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.52
PAX3-203ENST00000344493 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
PAX3-203ENST00000344493 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
PAX3-203ENST00000344493 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.32■□□□□ 0.52
PAX3-203ENST00000344493 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
PAX3-203ENST00000344493 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.31■□□□□ 0.52
PAX3-203ENST00000344493 A2MP01023 1474 aa18.31■□□□□ 0.52
PAX3-203ENST00000344493 ANP32BQ92688 251 aaKnown RBP18.31■□□□□ 0.52
PAX3-203ENST00000344493 PRDM15P57071 1507 aaPredicted RBP18.3■□□□□ 0.52
PAX3-203ENST00000344493 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
PAX3-203ENST00000344493 SKOR2Q2VWA4 1001 aaPredicted RBP18.3■□□□□ 0.52
PAX3-203ENST00000344493 HNRNPMP52272 730 aaKnown RBP eCLIP18.29■□□□□ 0.52
PAX3-203ENST00000344493 ZMYM3Q14202 1370 aa18.29■□□□□ 0.52
PAX3-203ENST00000344493 PIK3C2GO75747 1445 aa18.29■□□□□ 0.52
PAX3-203ENST00000344493 RAB3GAP1Q15042 981 aa18.28■□□□□ 0.52
PAX3-203ENST00000344493 PDS5BQ9NTI5 1447 aa18.28■□□□□ 0.52
PAX3-203ENST00000344493 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
PAX3-203ENST00000344493 PTPRGP23470 1445 aa18.27■□□□□ 0.52
PAX3-203ENST00000344493 XPCQ01831 940 aaPredicted RBP18.27■□□□□ 0.52
PAX3-203ENST00000344493 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
PAX3-203ENST00000344493 SMC5Q8IY18 1101 aa18.27■□□□□ 0.51
PAX3-203ENST00000344493 CROCC2H7BZ55 1655 aa18.26■□□□□ 0.51
PAX3-203ENST00000344493 UQCRHLA0A096LP55 91 aa18.26■□□□□ 0.51
PAX3-203ENST00000344493 UQCRHP07919 91 aa18.26■□□□□ 0.51
PAX3-203ENST00000344493 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
PAX3-203ENST00000344493 AAMPQ13685 434 aa18.25■□□□□ 0.51
PAX3-203ENST00000344493 MAP7D2Q96T17 732 aa18.25■□□□□ 0.51
PAX3-203ENST00000344493 DDX49Q9Y6V7 483 aaKnown RBP18.25■□□□□ 0.51
PAX3-203ENST00000344493 ZHX1Q9UKY1 873 aaPredicted RBP18.25■□□□□ 0.51
PAX3-203ENST00000344493 ABCC2Q92887 1545 aa18.24■□□□□ 0.51
PAX3-203ENST00000344493 SSFA2P28290 1259 aa18.24■□□□□ 0.51
PAX3-203ENST00000344493 TERF1P54274 439 aa18.24■□□□□ 0.51
PAX3-203ENST00000344493 CIZ1Q9ULV3 898 aaPredicted RBP18.24■□□□□ 0.51
PAX3-203ENST00000344493 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
PAX3-203ENST00000344493 CD2BP2O95400 341 aaKnown RBP18.23■□□□□ 0.51
PAX3-203ENST00000344493 SNX21Q969T3 373 aa18.23■□□□□ 0.51
PAX3-203ENST00000344493 ASXL1Q8IXJ9 1541 aa18.23■□□□□ 0.51
PAX3-203ENST00000344493 FAM135AQ9P2D6 1515 aa18.23■□□□□ 0.51
PAX3-203ENST00000344493 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
PAX3-203ENST00000344493 ITSN2Q9NZM3 1697 aa18.22■□□□□ 0.51
PAX3-203ENST00000344493 RAPGEF6Q8TEU7 1601 aa18.21■□□□□ 0.51
PAX3-203ENST00000344493 NCLP19338 710 aaKnown RBP18.21■□□□□ 0.51
PAX3-203ENST00000344493 RBM25P49756 843 aaKnown RBP18.21■□□□□ 0.51
PAX3-203ENST00000344493 FTSJ3Q8IY81 847 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms