RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 SAMD9Q5K651 1589 aa16.93■□□□□ 0.3
SMTN-201ENST00000333137 CFAP43Q8NDM7 1665 aa16.92■□□□□ 0.3
SMTN-201ENST00000333137 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
SMTN-201ENST00000333137 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
SMTN-201ENST00000333137 IRX5P78411 483 aaPredicted RBP16.92■□□□□ 0.3
SMTN-201ENST00000333137 C8orf34Q49A92 452 aa16.91■□□□□ 0.3
SMTN-201ENST00000333137 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
SMTN-201ENST00000333137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.9■□□□□ 0.3
SMTN-201ENST00000333137 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
SMTN-201ENST00000333137 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMTN-201ENST00000333137 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
SMTN-201ENST00000333137 HNRNPMP52272 730 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMTN-201ENST00000333137 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
SMTN-201ENST00000333137 DNAJC2Q99543 621 aaKnown RBP16.87■□□□□ 0.29
SMTN-201ENST00000333137 ATP10BO94823 1461 aa16.87■□□□□ 0.29
SMTN-201ENST00000333137 TRHP20396 242 aaPredicted RBP16.86■□□□□ 0.29
SMTN-201ENST00000333137 FAM193AP78312 1265 aa16.86■□□□□ 0.29
SMTN-201ENST00000333137 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 TSC1Q92574 1164 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 NCOA2Q15596 1464 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 TRIM34Q9BYJ4 488 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
SMTN-201ENST00000333137 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.29
SMTN-201ENST00000333137 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
SMTN-201ENST00000333137 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
SMTN-201ENST00000333137 CLGNO14967 610 aa16.82■□□□□ 0.28
SMTN-201ENST00000333137 NASPP49321 788 aaPredicted RBP16.82■□□□□ 0.28
SMTN-201ENST00000333137 RAPGEF6Q8TEU7 1601 aa16.82■□□□□ 0.28
SMTN-201ENST00000333137 ATP2B3Q16720 1220 aa16.82■□□□□ 0.28
SMTN-201ENST00000333137 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
SMTN-201ENST00000333137 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
SMTN-201ENST00000333137 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
SMTN-201ENST00000333137 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
SMTN-201ENST00000333137 HECW1Q76N89 1606 aa16.81■□□□□ 0.28
SMTN-201ENST00000333137 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
SMTN-201ENST00000333137 ISY1Q9ULR0 285 aaKnown RBP16.8■□□□□ 0.28
SMTN-201ENST00000333137 ARHGEF11O15085 1522 aa16.79■□□□□ 0.28
SMTN-201ENST00000333137 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMTN-201ENST00000333137 CCDC18Q5T9S5 1454 aa16.79■□□□□ 0.28
SMTN-201ENST00000333137 FAM177BA6PVY3 158 aa16.78■□□□□ 0.28
SMTN-201ENST00000333137 VGFO15240 615 aaPredicted RBP16.78■□□□□ 0.28
SMTN-201ENST00000333137 FAM69CQ0P6D2 419 aa16.78■□□□□ 0.28
SMTN-201ENST00000333137 PANK3Q9H999 370 aa16.78■□□□□ 0.28
SMTN-201ENST00000333137 SOX12O15370 315 aa16.77■□□□□ 0.28
SMTN-201ENST00000333137 TNNT3P45378 269 aaPredicted RBP16.77■□□□□ 0.28
SMTN-201ENST00000333137 CSPP1Q1MSJ5 1256 aa16.77■□□□□ 0.28
SMTN-201ENST00000333137 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
SMTN-201ENST00000333137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.27
SMTN-201ENST00000333137 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
SMTN-201ENST00000333137 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
SMTN-201ENST00000333137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.271e-7■□□□□ 10.9
SMTN-201ENST00000333137 TMED8Q6PL24 325 aaPredicted RBP16.75■□□□□ 0.27
SMTN-201ENST00000333137 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
SMTN-201ENST00000333137 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
SMTN-201ENST00000333137 PTMSP20962 102 aa16.74■□□□□ 0.27
SMTN-201ENST00000333137 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
SMTN-201ENST00000333137 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
SMTN-201ENST00000333137 MYOM3Q5VTT5 1437 aa16.73■□□□□ 0.27
SMTN-201ENST00000333137 CC2D1BQ5T0F9 858 aaKnown RBP16.73■□□□□ 0.27
SMTN-201ENST00000333137 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
SMTN-201ENST00000333137 TSPY4P0CV99 314 aa16.72■□□□□ 0.27
SMTN-201ENST00000333137 TSPY10P0CW01 314 aa16.72■□□□□ 0.27
SMTN-201ENST00000333137 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
SMTN-201ENST00000333137 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
SMTN-201ENST00000333137 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
SMTN-201ENST00000333137 CCDC66A2RUB6 948 aa16.71■□□□□ 0.27
SMTN-201ENST00000333137 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
SMTN-201ENST00000333137 C20orf194Q5TEA3 1177 aa16.71■□□□□ 0.27
SMTN-201ENST00000333137 TIGD1Q96MW7 591 aa16.71■□□□□ 0.27
SMTN-201ENST00000333137 EHBP1L1Q8N3D4 1523 aa16.71■□□□□ 0.27
SMTN-201ENST00000333137 SEC24BO95487 1268 aa16.71■□□□□ 0.26
SMTN-201ENST00000333137 MLECQ14165 292 aa16.71■□□□□ 0.26
SMTN-201ENST00000333137 EP400NLQ6ZTU2 488 aa16.71■□□□□ 0.26
SMTN-201ENST00000333137 PRR29P0C7W0 189 aa16.7■□□□□ 0.26
SMTN-201ENST00000333137 PPP1R9BQ96SB3 815 aa16.7■□□□□ 0.26
SMTN-201ENST00000333137 ABCA8O94911 1581 aa16.69■□□□□ 0.26
SMTN-201ENST00000333137 SUPT6HQ7KZ85 1726 aaKnown RBP16.69■□□□□ 0.26
SMTN-201ENST00000333137 LOC102724159A0A0B4J2E5 919 aa16.69■□□□□ 0.26
SMTN-201ENST00000333137 PWP2Q15269 919 aaKnown RBP16.69■□□□□ 0.26
SMTN-201ENST00000333137 PDCL2Q8N4E4 241 aa16.69■□□□□ 0.26
SMTN-201ENST00000333137 KIF14Q15058 1648 aa16.68■□□□□ 0.26
SMTN-201ENST00000333137 ERICH4A6NGS2 130 aa16.68■□□□□ 0.26
SMTN-201ENST00000333137 ASXL2Q76L83 1435 aa16.68■□□□□ 0.26
SMTN-201ENST00000333137 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
SMTN-201ENST00000333137 ZNF500O60304 480 aaPredicted RBP16.67■□□□□ 0.26
SMTN-201ENST00000333137 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
SMTN-201ENST00000333137 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.263e-6■■■□□ 15.4
SMTN-201ENST00000333137 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
SMTN-201ENST00000333137 PTPRKQ15262 1439 aa16.67■□□□□ 0.26
SMTN-201ENST00000333137 RAPGEF3O95398 923 aa16.67■□□□□ 0.26
SMTN-201ENST00000333137 PSEN1P49768 467 aa16.67■□□□□ 0.26
SMTN-201ENST00000333137 EFCAB2Q5VUJ9 269 aa16.67■□□□□ 0.26
SMTN-201ENST00000333137 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■■□□ 16
SMTN-201ENST00000333137 RALBP1Q15311 655 aa16.66■□□□□ 0.26
SMTN-201ENST00000333137 ZNF710Q8N1W2 664 aa16.66■□□□□ 0.26
SMTN-201ENST00000333137 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
SMTN-201ENST00000333137 USP19O94966 1318 aa16.65■□□□□ 0.26
SMTN-201ENST00000333137 MMP14P50281 582 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms