RNA–Protein interactions for RNA: ENSMUST00000052366.4

Pcdhb1-201, Transcript of Protocadherin beta 1, mousemouse

APPRIS P1 BASIC

Gene Pcdhb1, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1-201ENSMUST00000052366 Znf608Q56A10 1511 aa16.77■□□□□ 0.28
Pcdhb1-201ENSMUST00000052366 Kif3bQ61771 747 aa16.77■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Abcc6Q9R1S7 1498 aa16.77■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Sbno1Q689Z5 1390 aa16.76■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Kif16bB1AVY7 1312 aa16.75■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Gm20521D3Z5F7 333 aa16.75■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Mink1Q9JM52 1308 aa16.75■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Gm16486A0A1D5RMD1 1434 aa16.75■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Kidins220E9Q9B7 1793 aa16.74■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Ak9G3UYQ4 1894 aa16.74■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Arid4bA2CG63 1314 aaKnown RBP16.74■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Stk24Q99KH8 431 aa16.74■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Rab3gap2Q8BMG7 1366 aa16.74■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 DiexfQ8BTT6 772 aaKnown RBP16.72■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Abca17E9PX95 1733 aa16.71■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Xrn1P97789 1719 aaKnown RBP16.71■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Ylpm1Q9R0I7 1386 aaKnown RBP16.71■□□□□ 0.27
Pcdhb1-201ENSMUST00000052366 Prdm10Q3UTQ7 1184 aa16.7■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Nlrp6Q91WS2 869 aa16.7■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Gtf2e1Q9D0D5 440 aa16.69■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Srpk2O54781 681 aaKnown RBP16.69■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Fan1Q69ZT1 1020 aa16.68■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Pola1P33609 1465 aa16.68■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Apbb1Q9QXJ1 710 aa16.68■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Kif7B7ZNG0 1348 aa16.68■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Arid3cA6PWV5 409 aa16.67■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Ccdc27Q3V036 639 aa16.67■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 ErbinQ80TH2 1402 aa16.67■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Uggt2E9Q4X2 1504 aa16.67■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 TnikP83510 1323 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 B4galnt3Q6L8S8 986 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Usp40Q8BWR4 1235 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Dcaf11Q91VU6 549 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Rwdd1Q9CQK7 243 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Ttc21bQ0HA38 1315 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Neurod2Q62414 383 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Speer4f1Q9D5Q6 258 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Myo5cE9Q1F5 1742 aa16.66■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Lemd3Q9WU40 921 aa16.65■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Ttll13A4Q9F6 804 aa16.65■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Mbd3Q9Z2D8 285 aaKnown RBP16.65■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 AnkarA2RT91 1465 aa16.65■□□□□ 0.26
Pcdhb1-201ENSMUST00000052366 Igf1rQ60751 1373 aa16.64■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Plekhh1Q80TI1 1356 aa16.63■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Itsn2Q9Z0R6 1659 aa16.63■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Atf7ipQ7TT18 1306 aa16.63■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 ChgaP26339 463 aaKnown RBP16.63■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Cnga1P29974 684 aa16.62■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Ttc41Q692V3 1318 aa16.61■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Col17a1Q07563 1470 aa16.61■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Ythdc2B2RR83 1445 aaKnown RBP16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Clasp1Q80TV8 1535 aaKnown RBP16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Dbr1Q923B1 550 aa16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Zfyve16Q80U44 1528 aa16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Nos1Q9Z0J4 1429 aa16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Kdm5aQ3UXZ9 1690 aa16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Abca6Q8K441 1624 aa16.6■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Ccdc30Q8BVF4 654 aa16.59■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Myo3aQ8K3H5 1613 aa16.59■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Cep152A2AUM9 1736 aaKnown RBP16.58■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Stard8Q8K031 1019 aa16.58■□□□□ 0.25
Pcdhb1-201ENSMUST00000052366 Golga2Q921M4 999 aa16.58■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Iqgap3F8VQ29 1632 aa16.57■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Abca9Q8K449 1623 aa16.56■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Usp19Q3UJD6 1360 aa16.56■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Fndc1E9Q043 1732 aa16.56■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Kdm2bQ6P1G2 1309 aa16.55■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Znf518aB2RRF6 1478 aaKnown RBP16.55■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 AatkQ80YE4 1365 aa16.55■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Puf60Q3UEB3 564 aaKnown RBP16.54■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Chmp5Q9D7S9 219 aa16.54■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Nphp4P59240 1425 aa16.54■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 EspnQ9ET47 871 aa16.53■□□□□ 0.24
Pcdhb1-201ENSMUST00000052366 Tmem131lQ3U3D7 1597 aa16.52■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Rims1Q99NE5 1463 aa16.52■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 PtprtQ99M80 1454 aa16.51■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Abca8aQ8K442 1620 aa16.51■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Cdk5rap2Q8K389 1822 aa16.51■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Stag3O70576 1240 aa16.5■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 CanxP35564 591 aaKnown RBP16.5■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Iqcf3Q9D498 203 aa16.5■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Prex1Q69ZK0 1650 aa16.5■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Kiaa1107Q80TK0 1369 aa16.5■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Gas2l2Q5SSG4 860 aa16.48■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Adgrb3Q80ZF8 1522 aa16.47■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Ralbp1Q62172 648 aa16.47■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Uspl1Q3ULM6 1089 aa16.46■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Tspyl2Q7TQI8 677 aa16.46■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Myom1Q62234 1667 aaKnown RBP16.46■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Hsp90aa1P07901 733 aaKnown RBP16.46■□□□□ 0.23
Pcdhb1-201ENSMUST00000052366 Talpid3E9PV87 1520 aa16.45■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Ehbp1l1Q99MS7 1716 aa16.45■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 OvosQ3UU35 1456 aa16.45■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Gprasp1Q5U4C1 1347 aa16.45■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 NudcO35685 332 aaKnown RBP16.44■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Smc5Q8CG46 1101 aaKnown RBP16.44■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Polr3glQ8R0C0 218 aa16.44■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Pank1Q8K4K6 548 aa16.44■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Efcab6Q6P1E8 1516 aa16.43■□□□□ 0.22
Pcdhb1-201ENSMUST00000052366 Nkx1-2P42580 305 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 120.7 ms