RNA–Protein interactions for RNA: ENSMUST00000030014.8

Ncbp1-201, Transcript of Nuclear cap-binding protein subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1-201ENSMUST00000030014 Zfp444Q3TDV8 331 aaKnown RBP18.3■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Xrn1P97789 1719 aaKnown RBP18.3■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 ErbinQ80TH2 1402 aa18.3■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Kcnh8P59111 1102 aa18.29■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Slc4a3P16283 1227 aa18.29■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Abca9Q8K449 1623 aa18.28■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Fam184bQ0KK56 942 aa18.28■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Gtf2e1Q9D0D5 440 aa18.27■□□□□ 0.52
Ncbp1-201ENSMUST00000030014 Usp40Q8BWR4 1235 aa18.27■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Setd1aE9PYH6 1716 aa18.27■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Pabpn1Q8CCS6 302 aaKnown RBP18.26■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Esx1O88933 382 aa18.26■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Prdm10Q3UTQ7 1184 aa18.26■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Plcd4Q8K3R3 807 aa18.26■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Abca17E9PX95 1733 aa18.25■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Erbb3Q61526 1339 aa18.25■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Znf518aB2RRF6 1478 aaKnown RBP18.24■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Liat1Q810M6 228 aa18.24■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Ppp2r1aQ76MZ3 589 aa18.23■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Gtf3c3Q3TMP1 882 aa18.23■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 AnkarA2RT91 1465 aa18.22■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Tubgcp6G5E8P0 1769 aa18.21■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Sbno1Q689Z5 1390 aa18.21■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 AatkQ80YE4 1365 aa18.21■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 Ccdc27Q3V036 639 aa18.21■□□□□ 0.51
Ncbp1-201ENSMUST00000030014 OvosQ3UU35 1456 aa18.2■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Abca6Q8K441 1624 aa18.19■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Uggt2E9Q4X2 1504 aa18.19■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Cnga1P29974 684 aa18.19■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Egfem1Q8C088 590 aa18.19■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 CrbnQ8C7D2 445 aa18.19■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Kank1E9Q238 1360 aa18.19■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Gm16486A0A1D5RMD1 1434 aa18.18■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Ptch1Q61115 1434 aa18.18■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Myo5cE9Q1F5 1742 aa18.17■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Dcaf11Q91VU6 549 aa18.17■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Kif7B7ZNG0 1348 aa18.16■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Puf60Q3UEB3 564 aaKnown RBP18.16■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Zmym4A2A791 1549 aaKnown RBP18.16■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Tex14Q7M6U3 1450 aa18.15■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Gm156Q58A37 223 aa18.15■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Plch2A2AP18 1501 aa18.15■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Nlrp6Q91WS2 869 aa18.15■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Col17a1Q07563 1470 aa18.14■□□□□ 0.5
Ncbp1-201ENSMUST00000030014 Rab3gap2Q8BMG7 1366 aa18.14■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Fndc1E9Q043 1732 aa18.14■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Stard8Q8K031 1019 aa18.14■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Pola1P33609 1465 aa18.13■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Myo3aQ8K3H5 1613 aa18.13■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Iqgap3F8VQ29 1632 aa18.11■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Stag3O70576 1240 aa18.11■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Gli2Q0VGT2 1544 aa18.11■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Tmem131lQ3U3D7 1597 aa18.11■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 NeflP08551 543 aa18.1■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Fgd1P52734 960 aa18.1■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Arid4bA2CG63 1314 aaKnown RBP18.1■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Kif16bB1AVY7 1312 aa18.1■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Prex1Q69ZK0 1650 aa18.08■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 AU022751B1B0V2 589 aa18.08■□□□□ 0.49
Ncbp1-201ENSMUST00000030014 Irx3P81067 507 aa18.08■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Nphp4P59240 1425 aa18.07■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Rims1Q99NE5 1463 aa18.07■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Neurod2Q62414 383 aa18.06■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Topbp1Q6ZQF0 1515 aa18.06■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Speer4f1Q9D5Q6 258 aa18.05■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Atp10aO54827 1508 aa18.05■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Tcerg1Q8CGF7 1100 aaKnown RBP18.04■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Atp1b4Q99ME6 356 aa18.04■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Abca8aQ8K442 1620 aa18.04■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Adgrb3Q80ZF8 1522 aa18.04■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Hsp90aa1P07901 733 aaKnown RBP18.03■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Cep152A2AUM9 1736 aaKnown RBP18.03■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 4933416C03RikQ3V063 378 aa18.02■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Stk26Q99JT2 416 aa18.02■□□□□ 0.48
Ncbp1-201ENSMUST00000030014 Atf7ipQ7TT18 1306 aa18.02■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 IqubQ8CDK3 788 aa18.01■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Apbb1Q9QXJ1 710 aa18.01■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Itsn2Q9Z0R6 1659 aa18■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Depdc5P61460 1591 aa17.99■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Pknox2Q8BG99 474 aa17.98■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Golga2Q921M4 999 aa17.98■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Prkrip1Q9CWV6 186 aaKnown RBP17.98■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Yeats2Q3TUF7 1407 aa17.98■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Ipo9Q91YE6 1041 aa17.98■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Myom2Q14BI5 1463 aa17.98■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Dip2cE9PWR4 1557 aa17.97■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 DaxxO35613 739 aa17.97■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 AglF8VPN4 1532 aa17.96■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Ppp1r18Q8BQ30 594 aa17.96■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Rwdd1Q9CQK7 243 aa17.96■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Efcab6Q6P1E8 1516 aa17.96■□□□□ 0.47
Ncbp1-201ENSMUST00000030014 Ccdc30Q8BVF4 654 aa17.96■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Zranb1Q7M760 708 aa17.94■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Cdk5rap2Q8K389 1822 aa17.94■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Cdc42bpgQ80UW5 1551 aa17.94■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Tecpr2Q3UH45 1423 aa17.94■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Usp19Q3UJD6 1360 aa17.94■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Slc52a2Q9D8F3 450 aa17.93■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Kdm5aQ3UXZ9 1690 aa17.93■□□□□ 0.46
Ncbp1-201ENSMUST00000030014 Shq1Q7TMX5 569 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms