RNA–Protein interactions for RNA: ENSMUST00000030014.8

Ncbp1-201, Transcript of Nuclear cap-binding protein subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncbp1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncbp1-201ENSMUST00000030014 NischQ80TM9 1593 aa26.63■■□□□ 1.85
Ncbp1-201ENSMUST00000030014 Gm35339A0A140LHH9 1649 aa25.97■■□□□ 1.75
Ncbp1-201ENSMUST00000030014 Abcc9P70170 1546 aa25.79■■□□□ 1.72
Ncbp1-201ENSMUST00000030014 Abcc8B2RUS7 1588 aa25.29■■□□□ 1.64
Ncbp1-201ENSMUST00000030014 Rhox8Q6VSS7 320 aa24.94■■□□□ 1.58
Ncbp1-201ENSMUST00000030014 Rtl1Q7M732 1744 aa23.92■■□□□ 1.42
Ncbp1-201ENSMUST00000030014 Ccdc180J3QNE4 1664 aa23.6■■□□□ 1.37
Ncbp1-201ENSMUST00000030014 ScribQ80U72 1612 aa23.58■■□□□ 1.36
Ncbp1-201ENSMUST00000030014 Dcaf1Q80TR8 1506 aa23.45■■□□□ 1.34
Ncbp1-201ENSMUST00000030014 Rb1cc1Q9ESK9 1588 aa23.31■■□□□ 1.32
Ncbp1-201ENSMUST00000030014 Zcchc6Q5BLK4 1491 aaKnown RBP23.31■■□□□ 1.32
Ncbp1-201ENSMUST00000030014 Kdm5dQ62240 1548 aa23.19■■□□□ 1.3
Ncbp1-201ENSMUST00000030014 Ccdc136Q3TVA9 1136 aa23.15■■□□□ 1.3
Ncbp1-201ENSMUST00000030014 Baz1aO88379 1555 aa23.01■■□□□ 1.27
Ncbp1-201ENSMUST00000030014 NacadQ5SWP3 1504 aa22.99■■□□□ 1.27
Ncbp1-201ENSMUST00000030014 HrcG5E8J6 738 aa22.7■■□□□ 1.22
Ncbp1-201ENSMUST00000030014 Crybg2B7ZCC2 1516 aa22.53■■□□□ 1.2
Ncbp1-201ENSMUST00000030014 Trim41Q5NCC3 630 aa22.52■■□□□ 1.2
Ncbp1-201ENSMUST00000030014 Sycp2Q9CUU3 1500 aa22.5■■□□□ 1.19
Ncbp1-201ENSMUST00000030014 Smarca2Q6DIC0 1577 aa22.46■■□□□ 1.19
Ncbp1-201ENSMUST00000030014 Rpgrip1Q9EPQ2 1331 aa22.44■■□□□ 1.18
Ncbp1-201ENSMUST00000030014 Ehmt2Q9Z148 1263 aaKnown RBP22.38■■□□□ 1.17
Ncbp1-201ENSMUST00000030014 Cngb1E1AZ71 1325 aa22.12■■□□□ 1.13
Ncbp1-201ENSMUST00000030014 Cecr2E9Q2Z1 1453 aa22.11■■□□□ 1.13
Ncbp1-201ENSMUST00000030014 Acin1Q9JIX8 1338 aaKnown RBP22.07■■□□□ 1.12
Ncbp1-201ENSMUST00000030014 Brd4Q9ESU6 1400 aaKnown RBP22.03■■□□□ 1.12
Ncbp1-201ENSMUST00000030014 Cep164Q5DU05 1446 aa22.02■■□□□ 1.12
Ncbp1-201ENSMUST00000030014 BicraF8VPZ9 1578 aa21.99■■□□□ 1.11
Ncbp1-201ENSMUST00000030014 Chic1Q8CBW7 227 aa21.95■■□□□ 1.1
Ncbp1-201ENSMUST00000030014 Gab3Q8BSM5 595 aa21.87■■□□□ 1.09
Ncbp1-201ENSMUST00000030014 Rsf1E9PWW9 1441 aaKnown RBP21.87■■□□□ 1.09
Ncbp1-201ENSMUST00000030014 Esf1Q3V1V3 845 aaKnown RBP21.85■■□□□ 1.09
Ncbp1-201ENSMUST00000030014 Synj1Q8CHC4 1574 aa21.83■■□□□ 1.09
Ncbp1-201ENSMUST00000030014 Pcgf6Q99NA9 353 aa21.82■■□□□ 1.08
Ncbp1-201ENSMUST00000030014 Golga3P55937 1487 aa21.78■■□□□ 1.08
Ncbp1-201ENSMUST00000030014 Ccdc88bQ4QRL3 1481 aa21.74■■□□□ 1.07
Ncbp1-201ENSMUST00000030014 CftrP26361 1476 aa21.73■■□□□ 1.07
Ncbp1-201ENSMUST00000030014 Smarca4Q3TKT4 1613 aaKnown RBP21.49■■□□□ 1.03
Ncbp1-201ENSMUST00000030014 Cttnbp2B9EJA2 1648 aa21.49■■□□□ 1.03
Ncbp1-201ENSMUST00000030014 Top2bQ64511 1612 aa21.4■■□□□ 1.02
Ncbp1-201ENSMUST00000030014 Cc2d2aQ8CFW7 1633 aa21.26■□□□□ 0.99
Ncbp1-201ENSMUST00000030014 Supt5hO55201 1082 aaKnown RBP21.26■□□□□ 0.99
Ncbp1-201ENSMUST00000030014 Iqgap2Q3UQ44 1575 aa21.23■□□□□ 0.99
Ncbp1-201ENSMUST00000030014 Fmn1Q05860 1466 aa21.19■□□□□ 0.98
Ncbp1-201ENSMUST00000030014 Atad2bE9Q166 1460 aaKnown RBP21.16■□□□□ 0.98
Ncbp1-201ENSMUST00000030014 Neurod1Q60867 357 aa21.12■□□□□ 0.97
Ncbp1-201ENSMUST00000030014 Myt1lP97500 1187 aa21.1■□□□□ 0.97
Ncbp1-201ENSMUST00000030014 Pds5bQ4VA53 1446 aaKnown RBP21.08■□□□□ 0.97
Ncbp1-201ENSMUST00000030014 Mier1Q5UAK0 511 aa21.08■□□□□ 0.96
Ncbp1-201ENSMUST00000030014 Rapgef2Q8CHG7 1496 aa21.06■□□□□ 0.96
Ncbp1-201ENSMUST00000030014 Top2aQ01320 1528 aaKnown RBP21.04■□□□□ 0.96
Ncbp1-201ENSMUST00000030014 Npm2Q80W85 207 aa21.04■□□□□ 0.96
Ncbp1-201ENSMUST00000030014 UbtfP25976 765 aaKnown RBP20.96■□□□□ 0.95
Ncbp1-201ENSMUST00000030014 Cep162Q6ZQ06 1403 aa20.95■□□□□ 0.94
Ncbp1-201ENSMUST00000030014 Zeb1Q64318 1117 aa20.89■□□□□ 0.93
Ncbp1-201ENSMUST00000030014 NefmP08553 848 aa20.88■□□□□ 0.93
Ncbp1-201ENSMUST00000030014 Frmpd1A2AKB4 1549 aa20.88■□□□□ 0.93
Ncbp1-201ENSMUST00000030014 Il27Q8K3I6 234 aa20.87■□□□□ 0.93
Ncbp1-201ENSMUST00000030014 Wdr62Q3U3T8 1523 aa20.8■□□□□ 0.92
Ncbp1-201ENSMUST00000030014 Kif15Q6P9L6 1387 aa20.76■□□□□ 0.91
Ncbp1-201ENSMUST00000030014 TnnQ80Z71 1560 aa20.74■□□□□ 0.91
Ncbp1-201ENSMUST00000030014 Ercc6F8VPZ5 1481 aa20.72■□□□□ 0.91
Ncbp1-201ENSMUST00000030014 Clip1Q922J3 1391 aa20.71■□□□□ 0.91
Ncbp1-201ENSMUST00000030014 Plekhg3Q4VAC9 1341 aa20.69■□□□□ 0.9
Ncbp1-201ENSMUST00000030014 PtprkP35822 1457 aa20.67■□□□□ 0.9
Ncbp1-201ENSMUST00000030014 Las1lA2BE28 776 aaKnown RBP20.65■□□□□ 0.9
Ncbp1-201ENSMUST00000030014 Lamc3Q9R0B6 1581 aa20.63■□□□□ 0.89
Ncbp1-201ENSMUST00000030014 Arhgap35Q91YM2 1499 aa20.6■□□□□ 0.89
Ncbp1-201ENSMUST00000030014 1700123L14RikQ3V2K7 440 aa20.59■□□□□ 0.89
Ncbp1-201ENSMUST00000030014 Eif4g1Q6NZJ6 1600 aaKnown RBP20.59■□□□□ 0.89
Ncbp1-201ENSMUST00000030014 Ap3b1Q9Z1T1 1105 aa20.56■□□□□ 0.88
Ncbp1-201ENSMUST00000030014 NrkQ9R0G8 1455 aa20.52■□□□□ 0.88
Ncbp1-201ENSMUST00000030014 Csrnp3P59055 597 aa20.5■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Camsap1A2AHC3 1581 aa20.49■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Shroom4Q1W617 1475 aa20.48■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Ubl4bQ9CQ84 188 aa20.47■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Ccdc18Q640L5 1455 aa20.47■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Sall2Q9QX96 1004 aa20.47■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Unc13aQ4KUS2 1712 aa20.46■□□□□ 0.87
Ncbp1-201ENSMUST00000030014 Eea1Q8BL66 1411 aa20.45■□□□□ 0.86
Ncbp1-201ENSMUST00000030014 Phldb1Q6PDH0 1371 aaKnown RBP20.44■□□□□ 0.86
Ncbp1-201ENSMUST00000030014 Setd5Q5XJV7 1441 aa20.42■□□□□ 0.86
Ncbp1-201ENSMUST00000030014 Npm1Q61937 292 aaKnown RBP20.4■□□□□ 0.86
Ncbp1-201ENSMUST00000030014 Grin2bQ01097 1482 aa20.4■□□□□ 0.86
Ncbp1-201ENSMUST00000030014 Arap1Q4LDD4 1452 aa20.39■□□□□ 0.85
Ncbp1-201ENSMUST00000030014 Cux2P70298 1426 aa20.39■□□□□ 0.85
Ncbp1-201ENSMUST00000030014 Wdr66E9Q743 1299 aa20.37■□□□□ 0.85
Ncbp1-201ENSMUST00000030014 Aebp2Q9Z248 504 aaKnown RBP20.33■□□□□ 0.85
Ncbp1-201ENSMUST00000030014 Baz1bQ9Z277 1479 aa20.32■□□□□ 0.84
Ncbp1-201ENSMUST00000030014 Map3k1P53349 1493 aa20.32■□□□□ 0.84
Ncbp1-201ENSMUST00000030014 Mroh2bQ7M6Y6 1581 aa20.29■□□□□ 0.84
Ncbp1-201ENSMUST00000030014 Ncapd3Q6ZQK0 1506 aa20.29■□□□□ 0.84
Ncbp1-201ENSMUST00000030014 Thoc2B1AZI6 1594 aaKnown RBP20.28■□□□□ 0.84
Ncbp1-201ENSMUST00000030014 TonslQ6NZL6 1363 aa20.26■□□□□ 0.83
Ncbp1-201ENSMUST00000030014 Arhgef5E9Q7D5 1581 aa20.26■□□□□ 0.83
Ncbp1-201ENSMUST00000030014 Anks4bQ8K3X6 423 aa20.24■□□□□ 0.83
Ncbp1-201ENSMUST00000030014 LrpprcQ6PB66 1392 aaKnown RBP20.22■□□□□ 0.83
Ncbp1-201ENSMUST00000030014 Ppargc1bQ8VHJ7 1014 aa20.21■□□□□ 0.83
Ncbp1-201ENSMUST00000030014 CenpbP27790 599 aa20.21■□□□□ 0.83
Ncbp1-201ENSMUST00000030014 BlmO88700 1416 aa20.19■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms