RNA–Protein interactions for RNA: ENSMUST00000000109.10

Cntn1-201, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 5,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-201ENSMUST00000000109 Zhx1P70121 873 aa7.15□□□□□ -1.27
Cntn1-201ENSMUST00000000109 R3hcc1Q8BSI6 488 aa7.15□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Smc5Q8CG46 1101 aaKnown RBP7.15□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Rab11fip3Q8CHD8 1047 aa7.15□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Plekhh1Q80TI1 1356 aa7.15□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Tmco5bQ80X59 307 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 E2f4Q8R0K9 410 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Atl3Q91YH5 541 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Kif4P33174 1231 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Tomm22Q9CPQ3 142 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Fam43bA2AM80 330 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Exoc8Q6PGF7 716 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 NcapgE9PWG6 1004 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Gm20521D3Z5F7 333 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Pnmal2G3X9N3 661 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Tpd52l1O54818 204 aa7.14□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Vps8Q0P5W1 1427 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Dhx29Q6PGC1 1365 aaKnown RBP7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Kif27Q7M6Z4 1394 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Ccdc173A0JLY1 547 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Ifit1bl1D3Z6F0 470 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Ccdc146E9Q9F7 977 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Cnga1P29974 684 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Kank1E9Q238 1360 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 HnrnpuQ8VEK3 800 aaKnown RBP7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Utp3Q9JI13 469 aaKnown RBP7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Plekhg5Q66T02 1073 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Clstn1Q9EPL2 979 aa7.13□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Map4P27546 1125 aaKnown RBP7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Usp35M0QWN7 1009 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Riok3Q9DBU3 519 aaKnown RBP7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 CgnP59242 1191 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Arap1Q4LDD4 1452 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Smarca4Q3TKT4 1613 aaKnown RBP7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Ralbp1Q62172 648 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Clcn1Q64347 994 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Znf771Q8BJ90 317 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Cald1E9QA15 768 aaKnown RBP7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Il4rP16382 810 aa7.12□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Sf3a1Q8K4Z5 791 aaKnown RBP7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 U2af1Q9D883 239 aaKnown RBP7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Pdcl2Q78Y63 240 aa7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Efcab5A0JP43 1406 aa7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Nom1Q3UFM5 854 aaKnown RBP7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Zscan10Q3URR7 782 aa7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Ccnb3Q810T2 1396 aa7.11□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Erich4Q3UNU4 136 aa7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Srpk2O54781 681 aaKnown RBP7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Pes1Q9EQ61 584 aaKnown RBP7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Kcnn1Q9EQR3 537 aa7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 EzrP26040 586 aaKnown RBP7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Atp6v1dP57746 247 aa7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Naip1Q9QWK5 1403 aa7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Tspyl2Q7TQI8 677 aa7.1□□□□□ -1.27
Cntn1-201ENSMUST00000000109 St18Q80TY4 1045 aa7.09□□□□□ -1.27
Cntn1-201ENSMUST00000000109 PnnO35691 725 aaKnown RBP7.09□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Dnajc2P54103 621 aaKnown RBP7.09□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Stk11ipQ3TAA7 1072 aa7.09□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Dixdc1Q80Y83 711 aa7.09□□□□□ -1.27
Cntn1-201ENSMUST00000000109 Lekr1B2RVN1 116 aa7.09□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Olfml1Q8BSH2 233 aa7.09□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Anp32eP97822 260 aaKnown RBP7.08□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Filip1lQ6P6L0 1131 aa7.08□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Srcin1Q9QWI6 1250 aa7.08□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Ncoa1P70365 1447 aa7.08□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Kcng1A2BDX4 514 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Tmc1Q8R4P5 757 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Nek4Q9Z1J2 792 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Terf2O35144 541 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Kcnj4P52189 445 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Zkscan1Q8BGS3 561 aaKnown RBP7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Nectin2P32507 530 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Smarce1O54941 411 aaKnown RBP7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Pde4cQ3UEI1 686 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Ccdc94Q9D6J3 314 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Cdkn1cP49919 348 aa7.07□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Arhgef5E9Q7D5 1581 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Catsper2A2ARP9 588 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Syce3B5KM66 88 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Ccdc60Q8C4J0 545 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Chmp4cQ9D7F7 232 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Cgnl1Q6AW69 1298 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 1700010I14RikQ7TPG0 532 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Cog6Q8R3I3 657 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Zfp644E9QA22 1323 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Polr3gQ6NXY9 223 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Rcan3Q9JKK0 239 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Cc2d2aQ8CFW7 1633 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 1700017N19RikA0A087WPJ1 469 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Fam184bQ0KK56 942 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Eif4g2Q62448 906 aaKnown RBP7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Ppm1eQ80TL0 749 aa7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Exosc9Q9JHI7 438 aaKnown RBP7.06□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Senp3Q9EP97 568 aaKnown RBP7.05□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Naip5Q9R016 1403 aa7.05□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Kif7B7ZNG0 1348 aa7.05□□□□□ -1.28
Cntn1-201ENSMUST00000000109 SkilQ60665 675 aa7.05□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Top2aQ01320 1528 aaKnown RBP7.05□□□□□ -1.28
Cntn1-201ENSMUST00000000109 U2surpQ6NV83 1029 aaKnown RBP7.05□□□□□ -1.28
Cntn1-201ENSMUST00000000109 Nol12Q8BG17 217 aa7.05□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms