Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Gm25239-201ENSMUST00000174915 86 ntBASIC40.41■■■■■ 4.06
Usp35M0QWN7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.4■■■■□ 3.58
Usp35M0QWN7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Usp35M0QWN7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Usp35M0QWN7 Gm15042-201ENSMUST00000120212 883 ntBASIC35.24■■■■□ 3.23
Usp35M0QWN7 Gm24109-201ENSMUST00000175489 103 ntBASIC35.04■■■■□ 3.2
Usp35M0QWN7 Gm15045-201ENSMUST00000117359 883 ntBASIC34.42■■■■□ 3.1
Usp35M0QWN7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Usp35M0QWN7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.13■■■■□ 3.05
Usp35M0QWN7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.12■■■■□ 3.05
Usp35M0QWN7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Usp35M0QWN7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34■■■■□ 3.03
Usp35M0QWN7 Gm23366-201ENSMUST00000175022 89 ntBASIC33.76■■■□□ 2.99
Usp35M0QWN7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Usp35M0QWN7 Psd-208ENSMUST00000224556 2034 ntBASIC33.19■■■□□ 2.9
Usp35M0QWN7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Usp35M0QWN7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Usp35M0QWN7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.7■■■□□ 2.83
Usp35M0QWN7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Usp35M0QWN7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.46■■■□□ 2.79
Usp35M0QWN7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.39■■■□□ 2.78
Usp35M0QWN7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Usp35M0QWN7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Usp35M0QWN7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.31■■■□□ 2.76
Usp35M0QWN7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Usp35M0QWN7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Usp35M0QWN7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Usp35M0QWN7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Usp35M0QWN7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Usp35M0QWN7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Usp35M0QWN7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Usp35M0QWN7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.96■■■□□ 2.71
Usp35M0QWN7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Usp35M0QWN7 Gm25238-201ENSMUST00000174914 89 ntBASIC31.91■■■□□ 2.7
Usp35M0QWN7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
Usp35M0QWN7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Usp35M0QWN7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Usp35M0QWN7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.7■■■□□ 2.66
Usp35M0QWN7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Usp35M0QWN7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Usp35M0QWN7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Usp35M0QWN7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
Usp35M0QWN7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Usp35M0QWN7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Usp35M0QWN7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Usp35M0QWN7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Usp35M0QWN7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Usp35M0QWN7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.1■■■□□ 2.57
Usp35M0QWN7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.07■■■□□ 2.56
Usp35M0QWN7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Usp35M0QWN7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.96■■■□□ 2.55
Usp35M0QWN7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Usp35M0QWN7 Gm27325-201ENSMUST00000175467 74 ntBASIC30.86■■■□□ 2.53
Usp35M0QWN7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
Usp35M0QWN7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.75■■■□□ 2.51
Usp35M0QWN7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Usp35M0QWN7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
Usp35M0QWN7 Gm25262-201ENSMUST00000174934 133 ntBASIC30.65■■■□□ 2.5
Usp35M0QWN7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Usp35M0QWN7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.52■■■□□ 2.48
Usp35M0QWN7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Usp35M0QWN7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Usp35M0QWN7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Usp35M0QWN7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Usp35M0QWN7 Rab21-202ENSMUST00000218831 843 ntBASIC30.38■■■□□ 2.45
Usp35M0QWN7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.35■■■□□ 2.45
Usp35M0QWN7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.3■■■□□ 2.44
Usp35M0QWN7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.26■■■□□ 2.43
Usp35M0QWN7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.19■■■□□ 2.42
Usp35M0QWN7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Usp35M0QWN7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Usp35M0QWN7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Usp35M0QWN7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.06■■■□□ 2.4
Usp35M0QWN7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Usp35M0QWN7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.99■■■□□ 2.39
Usp35M0QWN7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Usp35M0QWN7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Usp35M0QWN7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.93■■■□□ 2.38
Usp35M0QWN7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.93■■■□□ 2.38
Usp35M0QWN7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.91■■■□□ 2.38
Usp35M0QWN7 Gm26115-201ENSMUST00000175605 87 ntBASIC29.91■■■□□ 2.38
Usp35M0QWN7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp35M0QWN7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp35M0QWN7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Usp35M0QWN7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Usp35M0QWN7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Usp35M0QWN7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Usp35M0QWN7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.79■■■□□ 2.36
Usp35M0QWN7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Usp35M0QWN7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Usp35M0QWN7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
Usp35M0QWN7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Usp35M0QWN7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Usp35M0QWN7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Usp35M0QWN7 Gm8109-201ENSMUST00000194076 746 ntBASIC29.71■■■□□ 2.35
Usp35M0QWN7 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.68■■■□□ 2.34
Usp35M0QWN7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Usp35M0QWN7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.63■■■□□ 2.33
Usp35M0QWN7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.61■■■□□ 2.33
Usp35M0QWN7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms