RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	SHM2	P37291	469 aa	Known RBP	4.56	□□□□□ -1.68
GEP3	YOR205C	ERV15	P38312	142 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	ECM14	P38836	430 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	SSO2	P39926	295 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	PCL7	P40186	285 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	PRM5	P40476	318 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	SYG1	P40528	902 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	GON7	P46984	123 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	YNL046W	P53956	172 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	DID2	P69771	204 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	HSK3	P69852	69 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	VPS28	Q02767	242 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	CAC2	Q04199	468 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	RIM9	Q04734	239 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	YFH1	Q07540	174 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	ALG6	Q12001	544 aa	Known RBP	4.56	□□□□□ -1.68
GEP3	YOR205C	SWT1	Q12104	458 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	YLR108C	Q12259	485 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	DGK1	Q12382	290 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	TFC7	Q12415	435 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	ATG31	Q12421	196 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	YJR112W-A	Q3E743	109 aa		4.56	□□□□□ -1.68
GEP3	YOR205C	MNS1	P32906	549 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	GEP4	P38812	185 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	LSM12	P38828	187 aa	Known RBP	4.55	□□□□□ -1.68
GEP3	YOR205C	POP2	P39008	433 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	SLM1	P40485	686 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	PNC1	P53184	216 aa	Known RBP	4.55	□□□□□ -1.68
GEP3	YOR205C	ORM1	P53224	222 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	TIM10	P87108	93 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	NRG1	Q03125	231 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	ECM18	Q04623	453 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	YTH1	Q06102	208 aa	Predicted RBP	4.55	□□□□□ -1.68
GEP3	YOR205C	PML1	Q07930	204 aa	Predicted RBP	4.55	□□□□□ -1.68
GEP3	YOR205C	RFM1	Q12192	310 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	YOR192C-C	Q3E736	78 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	ISN1	Q99312	450 aa		4.55	□□□□□ -1.68
GEP3	YOR205C	SEC16	P48415	2195 aa	Known RBP	4.55	□□□□□ -1.68
GEP3	YOR205C	LSB5	P25369	354 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	VMA3	P25515	160 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	COQ2	P32378	372 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	YJR111C	P47148	283 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	XPT1	P47165	209 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	SRB7	P47822	140 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	GPI15	P53961	229 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	ANT1	Q06497	328 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	RRT7	Q07829	113 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	YOR292C	Q08743	309 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	FMP16	Q12497	93 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	HUG1	Q6Q5K6	68 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	GCN1	P33892	2672 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	RPP1A	P05318	106 aa	Predicted RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	GDH1	P07262	454 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	RPL43A	P0CX25	92 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	RPL43B	P0CX26	92 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	SEC22	P22214	214 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	ISC10	P32645	267 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	SIT1	P39980	628 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	TAD2	P47058	250 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	TTI2	P47168	421 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	RPL21A	Q02753	160 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	PAM18	Q07914	168 aa		4.54	□□□□□ -1.68
GEP3	YOR205C	RPL21B	Q12672	160 aa	Known RBP	4.54	□□□□□ -1.68
GEP3	YOR205C	ERG2	P32352	222 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	YHL044W	P38727	235 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	GCV3	P39726	170 aa	Predicted RBP	4.53	□□□□□ -1.68
GEP3	YOR205C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
GEP3	YOR205C	PIR5	P46999	287 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	GEP7	P53171	287 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	YNR064C	P53750	290 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	CWC25	P53854	179 aa	Known RBP	4.53	□□□□□ -1.68
GEP3	YOR205C	MRPL22	P53881	309 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	YDR415C	Q04033	374 aa	Predicted RBP	4.53	□□□□□ -1.68
GEP3	YOR205C	LPP1	Q04396	274 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	ERP1	Q05359	219 aa	Known RBP	4.53	□□□□□ -1.68
GEP3	YOR205C	BER1	Q06688	274 aa	Known RBP	4.53	□□□□□ -1.68
GEP3	YOR205C	IRC25	Q07951	179 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	YOL118C	Q08259	102 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	AEP3	Q12089	606 aa		4.53	□□□□□ -1.68
GEP3	YOR205C	YBR085C-A	O43137	85 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	ATP10	P18496	279 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	DBP2	P24783	546 aa	Known RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	YKL187C	P34231	750 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	SOR1	P35497	357 aa	Known RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	YHR138C	P38841	114 aa	Predicted RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	IKI1	P38874	309 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	ASP1	P38986	381 aa	Predicted RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	GLR1	P41921	483 aa	Known RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	YJR012C	P47087	207 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	SMM1	P53720	384 aa	Known RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	WSC2	P53832	503 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	TEX1	P53851	422 aa	Known RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	TIM44	Q01852	431 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	YMR090W	Q04304	227 aa	Known RBP	4.52	□□□□□ -1.69
GEP3	YOR205C	YDL086W	Q07505	273 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	SOR2	Q07786	357 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	HRD1	Q08109	551 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	SPO24	Q3E752	67 aa		4.52	□□□□□ -1.69
GEP3	YOR205C	UBI4	P0CG63	381 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms